| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227182
Identifier: 21227182
GI number: 21227182
Start: 1272189
End: 1272977
Strand: Direct
Name: 21227182
Synonym: MM_1080
Alternate gene names: NA
Gene position: 1272189-1272977 (Clockwise)
Preceding gene: 21227181
Following gene: 21227184
Centisome position: 31.06
GC content: 38.53
Gene sequence:
>789_bases ATGGAATCATCATTACTGGATGTTCTCTTTCTTTCAGAAAAAAGGAAAAACCTGCTTCTGCTTCTTCTGGACGGACCCAA AACTATCGAGGAGATTAAAAGCACACTTGATGTACGTTCAAGCCCGATTATGACCCAGATAAAGATCCTGATGAAGCAGG ACTTAATTGTTGAAAATAACAGGCTATATAAGCTTTCAAGTATCGGAGAGATTCTGGTTCCCAAGATGAAAGCTATTCTT GAAACATTTAATGTATTTGATAAAAACCACAACTACTGGGTAAACCAGGACATGACGTCAATTCCTCCCGAGTTTCTGGA TGACATCGGAAAGCTTGGAAATTATATAGAAGTGAATCCTGACCGAAACCATGTTTTTGAGTATCCGAAAGAAGTGGTTA AAAACCTATCCGAATCAGAGAAGGTAATGATATCCTCATCATTTTTCCTTCCAATCTACCCTTCTCTCTGTATAGAGCTT GCTGCAAAAGGTACGGACATTACGCTTGTATTTACGGAATATGTCTATGACAGGATGCTTAACGACTACAAAAAAGAACT TGAGCATTTCCTGAACCTGAAGTATACAAAGCTGTATGTGTGCAATAACAATAATATGAAAATTGCATCAAGCATAGTTA CGGAGAAGTTTATGGCACTGTCCCTCTTTTGCAACAGCGGGATCTATTACAATCATAACCTGGTAAGTTTTGATGAAAGT GCACTTAAATGGGGAAAAGAACTTTTTGACCACTATAAGAGTATGGCAAGGCCGATTACCAGGGTCTGA
Upstream 100 bases:
>100_bases GGTAATGGTTATGGAGATAGTTGAGAAGTGATTAAACTTCCGGTATAGAGATATATACAATGTTGAATATAACAGGATGA AAAACAAGAGAGGGAATTAG
Downstream 100 bases:
>100_bases AAGAACTTCCCCTTATTAATTTTAGAAAATAAACTTTAAAGGGCAATGATCCTGCAAGAGTAAAGTACTGTTTTTCTAAA AAGAATTATTATACTATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MESSLLDVLFLSEKRKNLLLLLLDGPKTIEEIKSTLDVRSSPIMTQIKILMKQDLIVENNRLYKLSSIGEILVPKMKAIL ETFNVFDKNHNYWVNQDMTSIPPEFLDDIGKLGNYIEVNPDRNHVFEYPKEVVKNLSESEKVMISSSFFLPIYPSLCIEL AAKGTDITLVFTEYVYDRMLNDYKKELEHFLNLKYTKLYVCNNNNMKIASSIVTEKFMALSLFCNSGIYYNHNLVSFDES ALKWGKELFDHYKSMARPITRV
Sequences:
>Translated_262_residues MESSLLDVLFLSEKRKNLLLLLLDGPKTIEEIKSTLDVRSSPIMTQIKILMKQDLIVENNRLYKLSSIGEILVPKMKAIL ETFNVFDKNHNYWVNQDMTSIPPEFLDDIGKLGNYIEVNPDRNHVFEYPKEVVKNLSESEKVMISSSFFLPIYPSLCIEL AAKGTDITLVFTEYVYDRMLNDYKKELEHFLNLKYTKLYVCNNNNMKIASSIVTEKFMALSLFCNSGIYYNHNLVSFDES ALKWGKELFDHYKSMARPITRV >Mature_262_residues MESSLLDVLFLSEKRKNLLLLLLDGPKTIEEIKSTLDVRSSPIMTQIKILMKQDLIVENNRLYKLSSIGEILVPKMKAIL ETFNVFDKNHNYWVNQDMTSIPPEFLDDIGKLGNYIEVNPDRNHVFEYPKEVVKNLSESEKVMISSSFFLPIYPSLCIEL AAKGTDITLVFTEYVYDRMLNDYKKELEHFLNLKYTKLYVCNNNNMKIASSIVTEKFMALSLFCNSGIYYNHNLVSFDES ALKWGKELFDHYKSMARPITRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30454; Mature: 30454
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSLLDVLFLSEKRKNLLLLLLDGPKTIEEIKSTLDVRSSPIMTQIKILMKQDLIVENN CCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCC RLYKLSSIGEILVPKMKAILETFNVFDKNHNYWVNQDMTSIPPEFLDDIGKLGNYIEVNP CEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECC DRNHVFEYPKEVVKNLSESEKVMISSSFFLPIYPSLCIELAAKGTDITLVFTEYVYDRML CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHH NDYKKELEHFLNLKYTKLYVCNNNNMKIASSIVTEKFMALSLFCNSGIYYNHNLVSFDES HHHHHHHHHHHCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHCCCEEECCCEECCCHH ALKWGKELFDHYKSMARPITRV HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESSLLDVLFLSEKRKNLLLLLLDGPKTIEEIKSTLDVRSSPIMTQIKILMKQDLIVENN CCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCC RLYKLSSIGEILVPKMKAILETFNVFDKNHNYWVNQDMTSIPPEFLDDIGKLGNYIEVNP CEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEECC DRNHVFEYPKEVVKNLSESEKVMISSSFFLPIYPSLCIELAAKGTDITLVFTEYVYDRML CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHH NDYKKELEHFLNLKYTKLYVCNNNNMKIASSIVTEKFMALSLFCNSGIYYNHNLVSFDES HHHHHHHHHHHCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHCCCEEECCCEECCCHH ALKWGKELFDHYKSMARPITRV HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA