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The map label for this gene is ydfM [H]

Identifier: 21227178

GI number: 21227178

Start: 1265444

End: 1266436

Strand: Direct

Name: ydfM [H]

Synonym: MM_1076

Alternate gene names: 21227178

Gene position: 1265444-1266436 (Clockwise)

Preceding gene: 21227177

Following gene: 21227179

Centisome position: 30.89

GC content: 39.68

Gene sequence:

>993_bases
ATGAAAGCGGAGAAAAACCTGAATAAAACCCTGAAAATATCATATAAAGCCCTTTTTTTTAGCTTTGCATTAACTCTTAT
TAAATTACTTGCAGGATTTTTAGGAAACAGCACAGCACTTATTGCGGATTCTATCCGTTCATTTTCTGAATTAATCAATG
AACTTAAAAAGCTTCTTGAAGTTTTTATAGCCAGTAAACCGGAAGACTGGAGCCATAATTACGGACATGGAAAGGTTGCA
ACCCTCTTTACTGGAGCAGGGGCATGTATACTCCTTTTTGCCGGTATCGAGTCAATAAGCCTGGCTTCACAGGAACTGCT
TATATTTATACAGGGGAGAGAGACAGAAGCCCCTGAAATCCTCGCACTATCCGCAGCCTCTTTAACCCTGGTATCAAGAG
AAATTATTCCTTTGTTCAGCAGTAAAGGAAAAGAAATTGAAGGTACTTTATCAGGAACCGGCATTTACACCAGAAACGCT
CAGATTAGAAGTTTACTTCTCTCCTGTTTTGTTACTCTGGGAATAGGGTGTACTTTTCTCCCCGGAAAAAACTGGGTTGT
AACTGATTCCTTTATTGCGGCTCTCATGAGCCTTTATCTTCTGGGAACTTCTGGCAAACTCCTTTATGGCACTGCCAATG
AACTTATAGAAGCCTCTCTTGATGAGGAAGACAATAAAAAGATCAGGAAGATAATAAACACAACAGAAGGGGTTACGGGC
TCAGGGGAGCTTAAAACACGAAAAATAGGGAATGGGATAGCTATCAATGCCTGCATTACCGTAAGTGATTCATTGAACAT
TCAGGAAGTTGCAGAAATTGCAGACAGAGTGGAAAATAGGTTAAAAACAGTATATGGAGAAGACATTTATGCTCTTGTAA
AAGCAGAGCCTGACCCTGGAAGAAATTGTTCTTTCAGGAAAAAGATGGAATTCTCTGAAGAAGGAAGAAAAGAAAATAAG
GGCATAAACACTCAGGATAAAATGCTGGCCTGA

Upstream 100 bases:

>100_bases
TCGAGGAATGCTAAATTTTAGATAACACATACACCTCTTTTAGACCCTTTAGGGCCCGCTTTACCGAAGAAGGACAAAAT
TCATTGATGGTGAATTTCTG

Downstream 100 bases:

>100_bases
CAGAGAAAGTAAATAATTATAAATTCAGAAAAATAAAATAGGGAGATACTTATAAACCTGATACGAAGGTTTTACTGGTG
ATGGCTTTTTACCATATTAA

Product: cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKAEKNLNKTLKISYKALFFSFALTLIKLLAGFLGNSTALIADSIRSFSELINELKKLLEVFIASKPEDWSHNYGHGKVA
TLFTGAGACILLFAGIESISLASQELLIFIQGRETEAPEILALSAASLTLVSREIIPLFSSKGKEIEGTLSGTGIYTRNA
QIRSLLLSCFVTLGIGCTFLPGKNWVVTDSFIAALMSLYLLGTSGKLLYGTANELIEASLDEEDNKKIRKIINTTEGVTG
SGELKTRKIGNGIAINACITVSDSLNIQEVAEIADRVENRLKTVYGEDIYALVKAEPDPGRNCSFRKKMEFSEEGRKENK
GINTQDKMLA

Sequences:

>Translated_330_residues
MKAEKNLNKTLKISYKALFFSFALTLIKLLAGFLGNSTALIADSIRSFSELINELKKLLEVFIASKPEDWSHNYGHGKVA
TLFTGAGACILLFAGIESISLASQELLIFIQGRETEAPEILALSAASLTLVSREIIPLFSSKGKEIEGTLSGTGIYTRNA
QIRSLLLSCFVTLGIGCTFLPGKNWVVTDSFIAALMSLYLLGTSGKLLYGTANELIEASLDEEDNKKIRKIINTTEGVTG
SGELKTRKIGNGIAINACITVSDSLNIQEVAEIADRVENRLKTVYGEDIYALVKAEPDPGRNCSFRKKMEFSEEGRKENK
GINTQDKMLA
>Mature_330_residues
MKAEKNLNKTLKISYKALFFSFALTLIKLLAGFLGNSTALIADSIRSFSELINELKKLLEVFIASKPEDWSHNYGHGKVA
TLFTGAGACILLFAGIESISLASQELLIFIQGRETEAPEILALSAASLTLVSREIIPLFSSKGKEIEGTLSGTGIYTRNA
QIRSLLLSCFVTLGIGCTFLPGKNWVVTDSFIAALMSLYLLGTSGKLLYGTANELIEASLDEEDNKKIRKIINTTEGVTG
SGELKTRKIGNGIAINACITVSDSLNIQEVAEIADRVENRLKTVYGEDIYALVKAEPDPGRNCSFRKKMEFSEEGRKENK
GINTQDKMLA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=279, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 35948; Mature: 35948

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEKNLNKTLKISYKALFFSFALTLIKLLAGFLGNSTALIADSIRSFSELINELKKLLE
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VFIASKPEDWSHNYGHGKVATLFTGAGACILLFAGIESISLASQELLIFIQGRETEAPEI
HHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCHHHHHHCCEEEEEEEECCCCCCCCE
LALSAASLTLVSREIIPLFSSKGKEIEGTLSGTGIYTRNAQIRSLLLSCFVTLGIGCTFL
EEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHCCCEEEE
PGKNWVVTDSFIAALMSLYLLGTSGKLLYGTANELIEASLDEEDNKKIRKIINTTEGVTG
CCCCEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
SGELKTRKIGNGIAINACITVSDSLNIQEVAEIADRVENRLKTVYGEDIYALVKAEPDPG
CCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
RNCSFRKKMEFSEEGRKENKGINTQDKMLA
CCCCHHHHCCHHHHCCHHCCCCCCHHHCCC
>Mature Secondary Structure
MKAEKNLNKTLKISYKALFFSFALTLIKLLAGFLGNSTALIADSIRSFSELINELKKLLE
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VFIASKPEDWSHNYGHGKVATLFTGAGACILLFAGIESISLASQELLIFIQGRETEAPEI
HHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCHHHHHHCCEEEEEEEECCCCCCCCE
LALSAASLTLVSREIIPLFSSKGKEIEGTLSGTGIYTRNAQIRSLLLSCFVTLGIGCTFL
EEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHCCCEEEE
PGKNWVVTDSFIAALMSLYLLGTSGKLLYGTANELIEASLDEEDNKKIRKIINTTEGVTG
CCCCEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
SGELKTRKIGNGIAINACITVSDSLNIQEVAEIADRVENRLKTVYGEDIYALVKAEPDPG
CCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
RNCSFRKKMEFSEEGRKENKGINTQDKMLA
CCCCHHHHCCHHHHCCHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]