Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227169

Identifier: 21227169

GI number: 21227169

Start: 1250650

End: 1251435

Strand: Direct

Name: 21227169

Synonym: MM_1067

Alternate gene names: NA

Gene position: 1250650-1251435 (Clockwise)

Preceding gene: 21227168

Following gene: 21227172

Centisome position: 30.53

GC content: 39.19

Gene sequence:

>786_bases
ATGAAAATATCACTGATTGACCTGGCGTTCCTGTCCGAAAAAAGGAAAGACGTACTGCTCCTTCTGGAAGAAGGGCCCAA
GACAGGCGACGAAATAAAAACAGCCCTCAACGTGAATTCTACGTCAATTATGCCTCAAATTAAAAAGCTAAAAGAAGGGC
GCCTGATAGTGCAGGATGAAAAAAATTCATACAGGCTTTCGGATATGGGGGAAATAGTTGTCGAGAAGATGGAGCCTCTT
CTTGATACAGTCAGGGTTTTTGAGGAGAACTATGATTACTGGATCAACCATGATTTTACCGCAATTCCCGAACACCTCCT
TAACAGGATAGACGAACTAGGAAACTACTTTATGCTTGAAGCCGACCTTAACCGGCTTTTTGAAGTCCCTGAAGACTTTA
AAAATAACCTGCTCGAATCCAGAAATATAAAAATATTTCTTTCATACTTCAATCCTCTTTATATTGAAATATATTCCGAA
CTCATAAAAAAAGAAGCAGATATGTGTCTCATCCTGACAGAGCCTGTTTATGATAGGATGAAAAAAGACTACAGAGAAGA
CCTGAAGATGCTTATAGAATCAAAGAGCGCGGAAGTTTATATCTGTGACAAAAACGTAACTCTTAAAGACGTTGTAACAG
AACGTTTCTGCTCGCTCGTACTCTTTGATAAAAAAGGGAAGTTTGATCATCAGCGCTTGATGAGCTTCGACGAAAGTGCA
CTTAAATGGTGCGGAGAGCTTTTTTCATACTATAAAGACATGTCCAGAAAGCTGGAGAAAATATAA

Upstream 100 bases:

>100_bases
AGAAAGAAAGGACTTTTGCCAATAAAAGTTGCTTCCTGAAAAGGAATGAAGGAGAAATGCTCCGGCATACCTCAGAAGCT
TCTAGGGGAGATGGAATAAA

Downstream 100 bases:

>100_bases
CTGCCTGCGGATAATTGCGTAAAATAAAAACATTCCTCCTTGATGACAGACTGAAAATAAGCTGCAAAATTCAAATATGG
AATGAAAATAAGCTGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKISLIDLAFLSEKRKDVLLLLEEGPKTGDEIKTALNVNSTSIMPQIKKLKEGRLIVQDEKNSYRLSDMGEIVVEKMEPL
LDTVRVFEENYDYWINHDFTAIPEHLLNRIDELGNYFMLEADLNRLFEVPEDFKNNLLESRNIKIFLSYFNPLYIEIYSE
LIKKEADMCLILTEPVYDRMKKDYREDLKMLIESKSAEVYICDKNVTLKDVVTERFCSLVLFDKKGKFDHQRLMSFDESA
LKWCGELFSYYKDMSRKLEKI

Sequences:

>Translated_261_residues
MKISLIDLAFLSEKRKDVLLLLEEGPKTGDEIKTALNVNSTSIMPQIKKLKEGRLIVQDEKNSYRLSDMGEIVVEKMEPL
LDTVRVFEENYDYWINHDFTAIPEHLLNRIDELGNYFMLEADLNRLFEVPEDFKNNLLESRNIKIFLSYFNPLYIEIYSE
LIKKEADMCLILTEPVYDRMKKDYREDLKMLIESKSAEVYICDKNVTLKDVVTERFCSLVLFDKKGKFDHQRLMSFDESA
LKWCGELFSYYKDMSRKLEKI
>Mature_261_residues
MKISLIDLAFLSEKRKDVLLLLEEGPKTGDEIKTALNVNSTSIMPQIKKLKEGRLIVQDEKNSYRLSDMGEIVVEKMEPL
LDTVRVFEENYDYWINHDFTAIPEHLLNRIDELGNYFMLEADLNRLFEVPEDFKNNLLESRNIKIFLSYFNPLYIEIYSE
LIKKEADMCLILTEPVYDRMKKDYREDLKMLIESKSAEVYICDKNVTLKDVVTERFCSLVLFDKKGKFDHQRLMSFDESA
LKWCGELFSYYKDMSRKLEKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30910; Mature: 30910

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISLIDLAFLSEKRKDVLLLLEEGPKTGDEIKTALNVNSTSIMPQIKKLKEGRLIVQDE
CEEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEC
KNSYRLSDMGEIVVEKMEPLLDTVRVFEENYDYWINHDFTAIPEHLLNRIDELGNYFMLE
CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEH
ADLNRLFEVPEDFKNNLLESRNIKIFLSYFNPLYIEIYSELIKKEADMCLILTEPVYDRM
HHHHHHHCCCHHHHHHHHCCCCCEEEEEHHCHHHHHHHHHHHHCCCCEEEEEECHHHHHH
KKDYREDLKMLIESKSAEVYICDKNVTLKDVVTERFCSLVLFDKKGKFDHQRLMSFDESA
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCHHH
LKWCGELFSYYKDMSRKLEKI
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISLIDLAFLSEKRKDVLLLLEEGPKTGDEIKTALNVNSTSIMPQIKKLKEGRLIVQDE
CEEEEEHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEC
KNSYRLSDMGEIVVEKMEPLLDTVRVFEENYDYWINHDFTAIPEHLLNRIDELGNYFMLE
CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEEEH
ADLNRLFEVPEDFKNNLLESRNIKIFLSYFNPLYIEIYSELIKKEADMCLILTEPVYDRM
HHHHHHHCCCHHHHHHHHCCCCCEEEEEHHCHHHHHHHHHHHHCCCCEEEEEECHHHHHH
KKDYREDLKMLIESKSAEVYICDKNVTLKDVVTERFCSLVLFDKKGKFDHQRLMSFDESA
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCHHH
LKWCGELFSYYKDMSRKLEKI
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA