Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227056

Identifier: 21227056

GI number: 21227056

Start: 1131813

End: 1132202

Strand: Reverse

Name: 21227056

Synonym: MM_0954

Alternate gene names: NA

Gene position: 1132202-1131813 (Counterclockwise)

Preceding gene: 21227057

Following gene: 21227055

Centisome position: 27.64

GC content: 36.41

Gene sequence:

>390_bases
TTGCCCTTTATGACTTTCTTTGCATCCCGGTTATATCCGGTAAATGAATCTTACACAGGTTGCTTTGCAAATCTATACAT
TCATATCTTATATCGGCTGAATCTGGATTTGAACTCAGATTCAATCTATCGAATTCGATTAGAAGCCGAAGAACATTCCC
AGGTTGAAGTTAAATATGAGCTGAAGGAATGTATCAAGGTTGATTATAAAGCCGAATGGCATATTGGTTTCCTCCTTGTT
TGTATTGTTTCAATACCGATGCCTATGTATACTCTTTTGAGTAACACTTCTTCGAAAAGCTTGCTTAAAGCTTTCTTTAC
CAACCCCCCCATAATGTTACTCTGCCAGCCACTCACAGAAATTATTTTTGGAAATTTCTGTTCTATTTAA

Upstream 100 bases:

>100_bases
AGCTGAGGAACATATCTTTCACTCCATTCTTTTCTTTTATTTTGTTCATTCCCGTTATACATCCGTCTGCAATTGGTCCA
GGGATTCACTGCACTCCCAA

Downstream 100 bases:

>100_bases
ATTTACAGTTCTAATTTCTAAGTGGCAGTGAGCATACTTAGCTATATATATCAGCTTATATAAATTGAATAGAACTAGAC
ATCCTTACAAATCATAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLV
CIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI

Sequences:

>Translated_129_residues
MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLV
CIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI
>Mature_128_residues
PFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLVC
IVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15021; Mature: 14890

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00338 SOMATOTROPIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYE
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEEEH
LKECIKVDYKAEWHIGFLLVCIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTE
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH
IIFGNFCSI
HHHHHHCCC
>Mature Secondary Structure 
PFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYE
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEEEH
LKECIKVDYKAEWHIGFLLVCIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTE
HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH
IIFGNFCSI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA