Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227054

Identifier: 21227054

GI number: 21227054

Start: 1129151

End: 1130395

Strand: Reverse

Name: 21227054

Synonym: MM_0952

Alternate gene names: NA

Gene position: 1130395-1129151 (Counterclockwise)

Preceding gene: 21227055

Following gene: 21227053

Centisome position: 27.6

GC content: 41.53

Gene sequence:

>1245_bases
ATGGGGTTAATTAAAGAGCGTATTATTGCAACTTTTTTTTCTTTACTTCTAGTTGCCTCAGTTTTTGCATGTCCGGCTTC
TGCAGCAGTGGGAAGTGCAAACCTGAAAGTAACGATCGTTGAAACAAATCCTTATCCTGCAAAAATAGGAGAGTATCTTA
CCCTGAATATACAGGTGGAAAATGTCGGAGGAGCCAAAGCGGATAACATTGATATTGAAGTAGTCCCTGAATTTCCTTTT
TCTCTTGACTCTAAGGAAAATGCCCGGCAGAACATCGGAGCTCTCAATCCTGGCAGGACTGCTACAAAAGAGTTCTATCT
GTTTGTTGATAAAAGCGCCAAGAAAGGAAGTCGTTCTATAGACATCCGTACGAGAACGAGCCCGAATGATCCATGGAGTG
AACAATCTTTTGATATAAGAGTAGGCACTGAGACATTTACCAGCAAAGGCACTGTCGAACTTGCAGAGATCGTCTCGTCC
CCTGAGGTCTTTATGCCAGGAGATGAAGGTACTGTCACAGTAACTCTTAAGAATACCGCAACTGCGGCTACAGTTAGCAT
CGATGGAAAAGATTACGATACCAATGCAAGGATTCAGGCTGCAGTTTTAAGGCCGTTGTCTGATGGAATTCGTGTTCAGT
ACGCTCCCTATTACGAAATGGGACTTTTGGGGCCGGGAGAAAGTATTAAATTGACTTTCAATATCGAGGTTGAGGAAGAT
GCTAAAGAAGGAGTTCACAACCTTGAACTTGATATCGAAGGAAACTCTTATGACTATAACAGCCGGAAGAATATCCCGCT
CAAAGTTGACTCTTCAAATATTAAGGTGATTACTTCAAAACCACTTGAGCTGGTAAATGGTCAAGCTATAGTAGAGTTTG
ACGTAGCAAACACTCATCCAAACGAGCTAAACTCTGTCAGCATAAGACCTGAAGCTGAAGGTCTGAAATTTTATCCTGCA
GAATACTTCATAGGACCTATGGACCCTGATGAACTGTTCACCATAAAATTTGATGCTGTCCGGGACAATTCTTCGGGATC
TGACAATGAAGACTCAGAAGGCATAAATATGTCTGTTACTGCAAGCTATAATAATGGAATTAACAGACACGAAAATGTTG
CAGGTAACCTGGAATTTGCAACTGACTCTTTGCCTTCTGAAGGAAACTCTACAGTTGCAATTGCGGGTGTTATTGCAGTC
ATTTTTATCCCTGCAGCTGTTCTCCTGTATAGAAGAAAAAAATAA

Upstream 100 bases:

>100_bases
CACACGACCCCGAGATCGCAAAATTTGCTGATAGGGTCATCCTGGTAAAAGATGGAACAATTCAATATAATTAATTAAAC
GATAGATAAGGTGGGAATAT

Downstream 100 bases:

>100_bases
TGAGTGAATGAAGGCCTTCTAAATGTCATATTTGCGGGGGTAAAATATGATACAATTTGTACAGGCGGCTCACATTGCTT
CAGGAAGCATACGCAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MGLIKERIIATFFSLLLVASVFACPASAAVGSANLKVTIVETNPYPAKIGEYLTLNIQVENVGGAKADNIDIEVVPEFPF
SLDSKENARQNIGALNPGRTATKEFYLFVDKSAKKGSRSIDIRTRTSPNDPWSEQSFDIRVGTETFTSKGTVELAEIVSS
PEVFMPGDEGTVTVTLKNTATAATVSIDGKDYDTNARIQAAVLRPLSDGIRVQYAPYYEMGLLGPGESIKLTFNIEVEED
AKEGVHNLELDIEGNSYDYNSRKNIPLKVDSSNIKVITSKPLELVNGQAIVEFDVANTHPNELNSVSIRPEAEGLKFYPA
EYFIGPMDPDELFTIKFDAVRDNSSGSDNEDSEGINMSVTASYNNGINRHENVAGNLEFATDSLPSEGNSTVAIAGVIAV
IFIPAAVLLYRRKK

Sequences:

>Translated_414_residues
MGLIKERIIATFFSLLLVASVFACPASAAVGSANLKVTIVETNPYPAKIGEYLTLNIQVENVGGAKADNIDIEVVPEFPF
SLDSKENARQNIGALNPGRTATKEFYLFVDKSAKKGSRSIDIRTRTSPNDPWSEQSFDIRVGTETFTSKGTVELAEIVSS
PEVFMPGDEGTVTVTLKNTATAATVSIDGKDYDTNARIQAAVLRPLSDGIRVQYAPYYEMGLLGPGESIKLTFNIEVEED
AKEGVHNLELDIEGNSYDYNSRKNIPLKVDSSNIKVITSKPLELVNGQAIVEFDVANTHPNELNSVSIRPEAEGLKFYPA
EYFIGPMDPDELFTIKFDAVRDNSSGSDNEDSEGINMSVTASYNNGINRHENVAGNLEFATDSLPSEGNSTVAIAGVIAV
IFIPAAVLLYRRKK
>Mature_413_residues
GLIKERIIATFFSLLLVASVFACPASAAVGSANLKVTIVETNPYPAKIGEYLTLNIQVENVGGAKADNIDIEVVPEFPFS
LDSKENARQNIGALNPGRTATKEFYLFVDKSAKKGSRSIDIRTRTSPNDPWSEQSFDIRVGTETFTSKGTVELAEIVSSP
EVFMPGDEGTVTVTLKNTATAATVSIDGKDYDTNARIQAAVLRPLSDGIRVQYAPYYEMGLLGPGESIKLTFNIEVEEDA
KEGVHNLELDIEGNSYDYNSRKNIPLKVDSSNIKVITSKPLELVNGQAIVEFDVANTHPNELNSVSIRPEAEGLKFYPAE
YFIGPMDPDELFTIKFDAVRDNSSGSDNEDSEGINMSVTASYNNGINRHENVAGNLEFATDSLPSEGNSTVAIAGVIAVI
FIPAAVLLYRRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44964; Mature: 44833

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIKERIIATFFSLLLVASVFACPASAAVGSANLKVTIVETNPYPAKIGEYLTLNIQVE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEE
NVGGAKADNIDIEVVPEFPFSLDSKENARQNIGALNPGRTATKEFYLFVDKSAKKGSRSI
ECCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEE
DIRTRTSPNDPWSEQSFDIRVGTETFTSKGTVELAEIVSSPEVFMPGDEGTVTVTLKNTA
EEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEEECCC
TAATVSIDGKDYDTNARIQAAVLRPLSDGIRVQYAPYYEMGLLGPGESIKLTFNIEVEED
EEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCEEEEEEEEEECCH
AKEGVHNLELDIEGNSYDYNSRKNIPLKVDSSNIKVITSKPLELVNGQAIVEFDVANTHP
HHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHCCCEEEEEEECCCCC
NELNSVSIRPEAEGLKFYPAEYFIGPMDPDELFTIKFDAVRDNSSGSDNEDSEGINMSVT
CCCCEEEECCCCCCCEEECHHEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEE
ASYNNGINRHENVAGNLEFATDSLPSEGNSTVAIAGVIAVIFIPAAVLLYRRKK
EECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLIKERIIATFFSLLLVASVFACPASAAVGSANLKVTIVETNPYPAKIGEYLTLNIQVE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEE
NVGGAKADNIDIEVVPEFPFSLDSKENARQNIGALNPGRTATKEFYLFVDKSAKKGSRSI
ECCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEE
DIRTRTSPNDPWSEQSFDIRVGTETFTSKGTVELAEIVSSPEVFMPGDEGTVTVTLKNTA
EEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCEEECCCCCEEEEEEECCC
TAATVSIDGKDYDTNARIQAAVLRPLSDGIRVQYAPYYEMGLLGPGESIKLTFNIEVEED
EEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCEEEEEEEEEECCH
AKEGVHNLELDIEGNSYDYNSRKNIPLKVDSSNIKVITSKPLELVNGQAIVEFDVANTHP
HHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHCCCEEEEEEECCCCC
NELNSVSIRPEAEGLKFYPAEYFIGPMDPDELFTIKFDAVRDNSSGSDNEDSEGINMSVT
CCCCEEEECCCCCCCEEECHHEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEE
ASYNNGINRHENVAGNLEFATDSLPSEGNSTVAIAGVIAVIFIPAAVLLYRRKK
EECCCCCCCCCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA