| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is divJ [H]
Identifier: 21227050
GI number: 21227050
Start: 1123813
End: 1125006
Strand: Direct
Name: divJ [H]
Synonym: MM_0948
Alternate gene names: 21227050
Gene position: 1123813-1125006 (Clockwise)
Preceding gene: 21227046
Following gene: 21227059
Centisome position: 27.43
GC content: 42.29
Gene sequence:
>1194_bases GTGAGTGTCGAGAAATATCTGACTTCATTTCAATTAGAGATTATTAACACCGGCACGCTTTCGAAAGGTTCCCCGCTTCC TGAATCAGCAGTAAAAGAACTCATGAAAGAAAAGAGTGAAAAAGCCTTTTCTGAAGGATTCCCCGGCTTTAGAATGAATG TTAGTATTACCAGGAAGGGAGGTTCCCTGAATCCCGACCCTGAAAAGCTGGAAGAAAACCTTAAAGAGATTAACCGGGAT AACGAAAGAAAGCTTACATATCTATGTACTTTTCCTCTTGAAGAATTATCGGGCAGCGAACTTCTCAGGCTTGTGGAGGA AAAGGGCGTTCTCGTTAAAAGAAAAGGTGGCTGGGAATGCCTGATGCATACATGCAACATAAACGGGCAAAAAGAGCTTG AAACGACCCTCCTTAGAGCAAAAAAAGATGCTGAAGCTACAAACCGGGCAAAGAACAGTTTCATAATGAATATGAGCCAT GAGCTCAGGACCCCTCTCAATTCGGTTATAGGTTTTTCTGACCTGCTGCTGGAAGGAGCATTCGGGCCCATGAATACAAA GCAGTCAAAATATGTCAATAATATCCTTATAAGCGGAAAAAATCTGCTTGAGATCATTAATAACCTGCTTGATATCTCGA GGCTTGAAGCTGGAGAAAAGACTCTCAAATATGAGGACGTGGATGTTGCAAGCCTCATAGGAGAGGTTAGAATGAACCTC CTTTCACCTGCTTCGGTAAAGAAGATCAATGTCGAACTGAAGATAGACCCCTCTGTAGGAAATGTTGAAGCTGATATTTC AAAACTCAGACAGATCCTGTATAACCTGGTAAGTAACGCCATAAAGTTCACTCCAGCGAGAGGAAAGGTTGTAATCAGCG CCTGCAAAAAAGAAGGAGTTCTCGAAGTAAAAGTCTCGGATAACGGGATAGGGATTTCTGAAGATAGCTACGAGAAAATA TTCATGCCTTTCACACAGGCAGATTCTTCCGCAGCACGAGGATATGGGGGAGCAGGACTTGGGTTATTTATTGTCAGAAA CTTTGTAGACCTGCATGGAGGGGATATAAGTGTGAACTCCGAAGTAGGGAAAGGAAGTACATTTACTTTCACCATTCCGG CAAAACCAGAGAACACTTCCCTTCAGGAGAACGAAACAAAAAAGTGGAATCATCTACAAAAGGAAAAAAATTGA
Upstream 100 bases:
>100_bases CTATTTTAAACAGGGAATTGAGAGGGGAGAGTACTGCCTCTGGACTGTTACGGACGCACTTGAAGAAGAAAGAGTAAAAA AAGAACTTGAGAAAGCAGAT
Downstream 100 bases:
>100_bases AAAAAACAGAACTATTAAGTGAAGATGAAAATTGAAAATATATAACTTTCATTAAATACGGGCCTGGATTAAAACCTCTA TTTTAAGGATGGAGATCCAG
Product: sensory transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSVEKYLTSFQLEIINTGTLSKGSPLPESAVKELMKEKSEKAFSEGFPGFRMNVSITRKGGSLNPDPEKLEENLKEINRD NERKLTYLCTFPLEELSGSELLRLVEEKGVLVKRKGGWECLMHTCNINGQKELETTLLRAKKDAEATNRAKNSFIMNMSH ELRTPLNSVIGFSDLLLEGAFGPMNTKQSKYVNNILISGKNLLEIINNLLDISRLEAGEKTLKYEDVDVASLIGEVRMNL LSPASVKKINVELKIDPSVGNVEADISKLRQILYNLVSNAIKFTPARGKVVISACKKEGVLEVKVSDNGIGISEDSYEKI FMPFTQADSSAARGYGGAGLGLFIVRNFVDLHGGDISVNSEVGKGSTFTFTIPAKPENTSLQENETKKWNHLQKEKN
Sequences:
>Translated_397_residues MSVEKYLTSFQLEIINTGTLSKGSPLPESAVKELMKEKSEKAFSEGFPGFRMNVSITRKGGSLNPDPEKLEENLKEINRD NERKLTYLCTFPLEELSGSELLRLVEEKGVLVKRKGGWECLMHTCNINGQKELETTLLRAKKDAEATNRAKNSFIMNMSH ELRTPLNSVIGFSDLLLEGAFGPMNTKQSKYVNNILISGKNLLEIINNLLDISRLEAGEKTLKYEDVDVASLIGEVRMNL LSPASVKKINVELKIDPSVGNVEADISKLRQILYNLVSNAIKFTPARGKVVISACKKEGVLEVKVSDNGIGISEDSYEKI FMPFTQADSSAARGYGGAGLGLFIVRNFVDLHGGDISVNSEVGKGSTFTFTIPAKPENTSLQENETKKWNHLQKEKN >Mature_396_residues SVEKYLTSFQLEIINTGTLSKGSPLPESAVKELMKEKSEKAFSEGFPGFRMNVSITRKGGSLNPDPEKLEENLKEINRDN ERKLTYLCTFPLEELSGSELLRLVEEKGVLVKRKGGWECLMHTCNINGQKELETTLLRAKKDAEATNRAKNSFIMNMSHE LRTPLNSVIGFSDLLLEGAFGPMNTKQSKYVNNILISGKNLLEIINNLLDISRLEAGEKTLKYEDVDVASLIGEVRMNLL SPASVKKINVELKIDPSVGNVEADISKLRQILYNLVSNAIKFTPARGKVVISACKKEGVLEVKVSDNGIGISEDSYEKIF MPFTQADSSAARGYGGAGLGLFIVRNFVDLHGGDISVNSEVGKGSTFTFTIPAKPENTSLQENETKKWNHLQKEKN
Specific function: Kinase required for the regulation of cell division and differentiation. Makes part of a signal transduction pathway, activating pleD by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=239, Percent_Identity=43.5146443514644, Blast_Score=164, Evalue=8e-42, Organism=Escherichia coli, GI48994928, Length=241, Percent_Identity=37.7593360995851, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=32.156862745098, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788713, Length=265, Percent_Identity=30.9433962264151, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI87081816, Length=242, Percent_Identity=33.0578512396694, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786600, Length=246, Percent_Identity=30.4878048780488, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=29.7071129707113, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=29.8165137614679, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=25.4826254826255, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI87082128, Length=267, Percent_Identity=25.4681647940075, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790861, Length=205, Percent_Identity=31.219512195122, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=26.3829787234043, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=25, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1790346, Length=224, Percent_Identity=28.125, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=238, Percent_Identity=25.6302521008403, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=232, Percent_Identity=27.1551724137931, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790300, Length=277, Percent_Identity=24.187725631769, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789808, Length=226, Percent_Identity=24.7787610619469, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=77, Percent_Identity=44.1558441558442, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43924; Mature: 43793
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEKYLTSFQLEIINTGTLSKGSPLPESAVKELMKEKSEKAFSEGFPGFRMNVSITRKG CCHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC GSLNPDPEKLEENLKEINRDNERKLTYLCTFPLEELSGSELLRLVEEKGVLVKRKGGWEC CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHHHHHHCCEEEEECCCCEE LMHTCNINGQKELETTLLRAKKDAEATNRAKNSFIMNMSHELRTPLNSVIGFSDLLLEGA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCHHHHHHHHHHHHHCC FGPMNTKQSKYVNNILISGKNLLEIINNLLDISRLEAGEKTLKYEDVDVASLIGEVRMNL CCCCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHCEECCCHHHHHHHHHHHHH LSPASVKKINVELKIDPSVGNVEADISKLRQILYNLVSNAIKFTPARGKVVISACKKEGV CCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCE LEVKVSDNGIGISEDSYEKIFMPFTQADSSAARGYGGAGLGLFIVRNFVDLHGGDISVNS EEEEECCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCEEECC EVGKGSTFTFTIPAKPENTSLQENETKKWNHLQKEKN CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SVEKYLTSFQLEIINTGTLSKGSPLPESAVKELMKEKSEKAFSEGFPGFRMNVSITRKG CHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECC GSLNPDPEKLEENLKEINRDNERKLTYLCTFPLEELSGSELLRLVEEKGVLVKRKGGWEC CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHHHHHHCCEEEEECCCCEE LMHTCNINGQKELETTLLRAKKDAEATNRAKNSFIMNMSHELRTPLNSVIGFSDLLLEGA EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCHHHHHHHHHHHHHCC FGPMNTKQSKYVNNILISGKNLLEIINNLLDISRLEAGEKTLKYEDVDVASLIGEVRMNL CCCCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHCEECCCHHHHHHHHHHHHH LSPASVKKINVELKIDPSVGNVEADISKLRQILYNLVSNAIKFTPARGKVVISACKKEGV CCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCCE LEVKVSDNGIGISEDSYEKIFMPFTQADSSAARGYGGAGLGLFIVRNFVDLHGGDISVNS EEEEECCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCEEECC EVGKGSTFTFTIPAKPENTSLQENETKKWNHLQKEKN CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1438215; 11259647 [H]