| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is kefC [H]
Identifier: 21227035
GI number: 21227035
Start: 1099526
End: 1101538
Strand: Reverse
Name: kefC [H]
Synonym: MM_0933
Alternate gene names: 21227035
Gene position: 1101538-1099526 (Counterclockwise)
Preceding gene: 21227038
Following gene: 21227034
Centisome position: 26.89
GC content: 44.81
Gene sequence:
>2013_bases TTGAAATTTAAATATATATTAATGGCAACAGATCTTTTAACCGACTTACTCATTATTTTCGGGCTTTCTATTCCCGTAGT TTTCACCTTCTCAAAGCTGAAAATAGCTCCGCTGGTGGGTTTTTTGCTTGTTGGCATCCTTGCGGGGCCTTTTGGTTTGG GCTTGGTCCAAGATCTGGGCAATATTGAAATGCTGGCTGAGATAGGAGTCATATTGCTGCTCTTTACTATCGGGATGGAA TTTTCCCTGCGTGAACTCCTGCAGCTTCGCAGAATAGTCATCTTTGGAGGAGGGTTGCAGCTTTTTATAACTACTCTTGC TGCCGCTTTTATTTTCCTCATTCTTGGAATTTCCAGAGAAACTGCAATTTTCCTCGGACTCCTGGTGGCATTGAGCAGCA CGGCAATAGTCCTTAAAATCTTGCAGGAAAAAGGGGAAATTTACAGTCTTCACGGGCGGACTTCCCTGGGGATATTGATC TTCCAGGACGTAGCTGCAGTAATGATAATTCTCCTGATTCCTCTCCTTGCGGGAACTCAGGGAACGGAAAAATCTTTCTT AGAACTTATCATGCAGGGATTTGGGCTCATACTGTTTACTATATTCAGCGCCAGATATGCAGTCCCTTTTATTATGTTCC AGGTAGCAAAGACGCGTAATAGCGAACTGTTTCTCCTGAGTGTTGTGGCAATCGGACTCGCGGTTGCCTGGCTGACTTCC ATGGTCGGTCTTTCTCTGGCTCTTGGAGCTTTTCTTGCCGGTCTGATCATTTCAGAGTCCGAATATTCGATCCAGGCTCT TGGGAACTTAATTCCTTTCAGGGATATGTTTATGAGCATTTTTTTCATTTCAATGGGGATGCTTCTTGATCTGGGTGTAT TAAGAGAACATTTACCCTTAATACTGGCTGCAACTCTTGGAGTGCTTATTTTGAAAGCTGCAGCGAATTCCCTTAGCACT TTCCTTATAGGTTTTCCTTTGCACACCATGATCCTGGTCGGTTTCTCCCTCTCTCAGGTTGGGGAATTTTCACTGATTCT TGCGAAGGTAGGCTTTACGAGCGGGCTGATAACTACTGAAATTTATCAGGAGTTTCTAGATATCGCCGTAATTTCCATGG TACTCACTCCTTTCATAATGAGCATGGGGTATCGGACTACATCATTTGCCGAGTCTCTCCCCTTACCTTCAATAGTAAAA ACCGGGTGGTACAGGCATTTTAAGGAGCACGTACCTCAAGATGCACCTGAAAATCATGTGATTGTAATAGGTTTCGGAAT AAATGGGAGAAATGTCGCAGCAGCTGCAAAGTCATCTTCTATCCCCTACCGGATAATCGAGATCAATCCCGAAACCGTCA GGCAGGAGAAACAGAAAGGAGAACATATCCTTTATGGAGACGCTGCCCAGAAAGCTGTTCTGGAACATGCAGGTATCCGG GCTGCGAAATCGGTCGTTGTGACCGCAGGGGATCCGGTAAGTGCCAGAAGAGTTATTGAAGCTGCTAGGCGGCTAAACCC TGAAGTCCATATTATTGCCAGGACACATTTCCTGAGCGAGCTGGATAAATTTCATATCGCCGGAGCCGATGAAGTTATTT CGGATGAGTTTGAAAGCTCAATAGAAATTTTCACAAGAGTGCTCCACAGGTATCTGGTTCCTTCAAGTGAAATCGATTCT CTGGGCTCAACCTTACGCTCCGACCATTACAGGATGCTTCGCAGTCCTGACATTCCCCGGAAAAAGTTCTGCGACCTGGC TCTCGATTTTGCAGATGTGGAAATAAGGAGTATCAGGGTTGGGGAACTTTCCAGGGCGGCAGGAATGACCATTGGAGATC TCAACGTCAGGAAAAAATATGGAGTCTCTATACTTGCAATTTCCAGAAATCATAAACTTATCTCCGAGCTGCAAGCAGAG ACCAAAATCCATTCAAGCGATATCCTGCTTGTGATCAGCCCTCCTGAAAAGCTTGATGAAGTTAAAAAGCTTTTTGAAGA TCAGGTGGGATAA
Upstream 100 bases:
>100_bases TCTTTTTTCATTACTGGTCCCTCATTATTGTTTTTTCATTTTTTTCGGTTACAGATTTTCAATGTTTCGATAATAGATAA TATGATGAAATTTATATCAT
Downstream 100 bases:
>100_bases AGTTTCTTTATCCCGGTATTTTTCAGGTAAGGTTGAAAATAAACAATTTCAGGGATAACGCCGGAAGTCAGGATACGCGA ATACGAATACATGAATATTT
Product: glutathione-regulated potassium-efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MKFKYILMATDLLTDLLIIFGLSIPVVFTFSKLKIAPLVGFLLVGILAGPFGLGLVQDLGNIEMLAEIGVILLLFTIGME FSLRELLQLRRIVIFGGGLQLFITTLAAAFIFLILGISRETAIFLGLLVALSSTAIVLKILQEKGEIYSLHGRTSLGILI FQDVAAVMIILLIPLLAGTQGTEKSFLELIMQGFGLILFTIFSARYAVPFIMFQVAKTRNSELFLLSVVAIGLAVAWLTS MVGLSLALGAFLAGLIISESEYSIQALGNLIPFRDMFMSIFFISMGMLLDLGVLREHLPLILAATLGVLILKAAANSLST FLIGFPLHTMILVGFSLSQVGEFSLILAKVGFTSGLITTEIYQEFLDIAVISMVLTPFIMSMGYRTTSFAESLPLPSIVK TGWYRHFKEHVPQDAPENHVIVIGFGINGRNVAAAAKSSSIPYRIIEINPETVRQEKQKGEHILYGDAAQKAVLEHAGIR AAKSVVVTAGDPVSARRVIEAARRLNPEVHIIARTHFLSELDKFHIAGADEVISDEFESSIEIFTRVLHRYLVPSSEIDS LGSTLRSDHYRMLRSPDIPRKKFCDLALDFADVEIRSIRVGELSRAAGMTIGDLNVRKKYGVSILAISRNHKLISELQAE TKIHSSDILLVISPPEKLDEVKKLFEDQVG
Sequences:
>Translated_670_residues MKFKYILMATDLLTDLLIIFGLSIPVVFTFSKLKIAPLVGFLLVGILAGPFGLGLVQDLGNIEMLAEIGVILLLFTIGME FSLRELLQLRRIVIFGGGLQLFITTLAAAFIFLILGISRETAIFLGLLVALSSTAIVLKILQEKGEIYSLHGRTSLGILI FQDVAAVMIILLIPLLAGTQGTEKSFLELIMQGFGLILFTIFSARYAVPFIMFQVAKTRNSELFLLSVVAIGLAVAWLTS MVGLSLALGAFLAGLIISESEYSIQALGNLIPFRDMFMSIFFISMGMLLDLGVLREHLPLILAATLGVLILKAAANSLST FLIGFPLHTMILVGFSLSQVGEFSLILAKVGFTSGLITTEIYQEFLDIAVISMVLTPFIMSMGYRTTSFAESLPLPSIVK TGWYRHFKEHVPQDAPENHVIVIGFGINGRNVAAAAKSSSIPYRIIEINPETVRQEKQKGEHILYGDAAQKAVLEHAGIR AAKSVVVTAGDPVSARRVIEAARRLNPEVHIIARTHFLSELDKFHIAGADEVISDEFESSIEIFTRVLHRYLVPSSEIDS LGSTLRSDHYRMLRSPDIPRKKFCDLALDFADVEIRSIRVGELSRAAGMTIGDLNVRKKYGVSILAISRNHKLISELQAE TKIHSSDILLVISPPEKLDEVKKLFEDQVG >Mature_670_residues MKFKYILMATDLLTDLLIIFGLSIPVVFTFSKLKIAPLVGFLLVGILAGPFGLGLVQDLGNIEMLAEIGVILLLFTIGME FSLRELLQLRRIVIFGGGLQLFITTLAAAFIFLILGISRETAIFLGLLVALSSTAIVLKILQEKGEIYSLHGRTSLGILI FQDVAAVMIILLIPLLAGTQGTEKSFLELIMQGFGLILFTIFSARYAVPFIMFQVAKTRNSELFLLSVVAIGLAVAWLTS MVGLSLALGAFLAGLIISESEYSIQALGNLIPFRDMFMSIFFISMGMLLDLGVLREHLPLILAATLGVLILKAAANSLST FLIGFPLHTMILVGFSLSQVGEFSLILAKVGFTSGLITTEIYQEFLDIAVISMVLTPFIMSMGYRTTSFAESLPLPSIVK TGWYRHFKEHVPQDAPENHVIVIGFGINGRNVAAAAKSSSIPYRIIEINPETVRQEKQKGEHILYGDAAQKAVLEHAGIR AAKSVVVTAGDPVSARRVIEAARRLNPEVHIIARTHFLSELDKFHIAGADEVISDEFESSIEIFTRVLHRYLVPSSEIDS LGSTLRSDHYRMLRSPDIPRKKFCDLALDFADVEIRSIRVGELSRAAGMTIGDLNVRKKYGVSILAISRNHKLISELQAE TKIHSSDILLVISPPEKLDEVKKLFEDQVG
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=377, Percent_Identity=27.5862068965517, Blast_Score=108, Evalue=2e-23, Organism=Escherichia coli, GI1786685, Length=546, Percent_Identity=33.1501831501831, Blast_Score=243, Evalue=4e-65, Organism=Escherichia coli, GI1789749, Length=537, Percent_Identity=29.608938547486, Blast_Score=212, Evalue=8e-56, Organism=Escherichia coli, GI1786232, Length=540, Percent_Identity=28.7037037037037, Blast_Score=203, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6322367, Length=392, Percent_Identity=21.6836734693878, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 73502; Mature: 73502
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKYILMATDLLTDLLIIFGLSIPVVFTFSKLKIAPLVGFLLVGILAGPFGLGLVQDLG CCEEEEEHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC NIEMLAEIGVILLLFTIGMEFSLRELLQLRRIVIFGGGLQLFITTLAAAFIFLILGISRE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH TAIFLGLLVALSSTAIVLKILQEKGEIYSLHGRTSLGILIFQDVAAVMIILLIPLLAGTQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GTEKSFLELIMQGFGLILFTIFSARYAVPFIMFQVAKTRNSELFLLSVVAIGLAVAWLTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH MVGLSLALGAFLAGLIISESEYSIQALGNLIPFRDMFMSIFFISMGMLLDLGVLREHLPL HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAATLGVLILKAAANSLSTFLIGFPLHTMILVGFSLSQVGEFSLILAKVGFTSGLITTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCCHHHHH IYQEFLDIAVISMVLTPFIMSMGYRTTSFAESLPLPSIVKTGWYRHFKEHVPQDAPENHV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE IVIGFGINGRNVAAAAKSSSIPYRIIEINPETVRQEKQKGEHILYGDAAQKAVLEHAGIR EEEEECCCCCCHHHHCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCHHHHHHHHHHCCH AAKSVVVTAGDPVSARRVIEAARRLNPEVHIIARTHFLSELDKFHIAGADEVISDEFESS HHCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH IEIFTRVLHRYLVPSSEIDSLGSTLRSDHYRMLRSPDIPRKKFCDLALDFADVEIRSIRV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEC GELSRAAGMTIGDLNVRKKYGVSILAISRNHKLISELQAETKIHSSDILLVISPPEKLDE CCHHHHHCCEEECCCCHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCHHHHHH VKKLFEDQVG HHHHHHHCCC >Mature Secondary Structure MKFKYILMATDLLTDLLIIFGLSIPVVFTFSKLKIAPLVGFLLVGILAGPFGLGLVQDLG CCEEEEEHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC NIEMLAEIGVILLLFTIGMEFSLRELLQLRRIVIFGGGLQLFITTLAAAFIFLILGISRE CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH TAIFLGLLVALSSTAIVLKILQEKGEIYSLHGRTSLGILIFQDVAAVMIILLIPLLAGTQ HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GTEKSFLELIMQGFGLILFTIFSARYAVPFIMFQVAKTRNSELFLLSVVAIGLAVAWLTS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH MVGLSLALGAFLAGLIISESEYSIQALGNLIPFRDMFMSIFFISMGMLLDLGVLREHLPL HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAATLGVLILKAAANSLSTFLIGFPLHTMILVGFSLSQVGEFSLILAKVGFTSGLITTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCCCCHHHHH IYQEFLDIAVISMVLTPFIMSMGYRTTSFAESLPLPSIVKTGWYRHFKEHVPQDAPENHV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE IVIGFGINGRNVAAAAKSSSIPYRIIEINPETVRQEKQKGEHILYGDAAQKAVLEHAGIR EEEEECCCCCCHHHHCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCHHHHHHHHHHCCH AAKSVVVTAGDPVSARRVIEAARRLNPEVHIIARTHFLSELDKFHIAGADEVISDEFESS HHCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHH IEIFTRVLHRYLVPSSEIDSLGSTLRSDHYRMLRSPDIPRKKFCDLALDFADVEIRSIRV HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEC GELSRAAGMTIGDLNVRKKYGVSILAISRNHKLISELQAETKIHSSDILLVISPPEKLDE CCHHHHHCCEEECCCCHHHHCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCHHHHHH VKKLFEDQVG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]