Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227034

Identifier: 21227034

GI number: 21227034

Start: 1098503

End: 1099195

Strand: Reverse

Name: 21227034

Synonym: MM_0932

Alternate gene names: NA

Gene position: 1099195-1098503 (Counterclockwise)

Preceding gene: 21227035

Following gene: 21227033

Centisome position: 26.83

GC content: 45.31

Gene sequence:

>693_bases
ATGAGAGATTTTAAAGAGACTTTTCTTGAAGTTATTCAGGCGGTATTGCCTCTAACACTGGCGGTGATAGTGATCATGCT
GGTATTTCTCGGCTCGAACCTGGGACATCTGGCGTCCTTCCTGACCGGGACAATAATGGTCATAGCAGGAATGACTTTTT
TTCTTATGGGGGTCAAACTGGGCATGCTGCCAATGGGTGAAGCGATAGGGTCTAATTTGCCAAAGCACGGATCACTGATA
TTTATTGCAGTTGCAGCATTTTTTCTCTCTTTTCTGACAACTGTTGCGGAACCCGATGTAAGAGTCCTGAGCAGCATGAT
CGATTCAGTCTCAAAAGACAGCATAGACAGAAATATACTGATAGTATCAATAGGTGTTGGAGTAGGGTTTTTTGTGACCG
TTTCCATCCTCAGGATAATTTACGGAATCCCTATAAAATATCTTTTTGCAATAAGCTACCTTCTCATAATCTTTCTGTCC
TTTATCACACCGGCGGAGTTCCGTGCTATTTCTTTTGATGCGGGAGGTGTGACCACCGGACCAATGACCGTGCCTGTAAT
TATGGCACTGGGGATCGGGACAGCTTCGGTACTGCAGGAAAGATCCCAGCTTTCTGAAGGGTTTGGGCTCATTGGTTTTG
CCTCTATAGGTCCCATACTCAGCCTGATGCTACTGGGGGTACTGTCTTCATGA

Upstream 100 bases:

>100_bases
TAGATTCCAATTCAGTCTCGTTAATTAAATATTTTTGAATATTTCCGCTTTTCACGTTTATGGCTACCTTTCATTATTTA
TCTGGTGGAAAATTCTTATG

Downstream 100 bases:

>100_bases
GTGGAAGTACAGAAGGGATACTGTCTGTAGTTGTCGAAGTAAGTCAGGCACTTATCCCTCTTGTGATATTTTTTATCGTA
TTCCAGCGCCTGTACCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI
FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS
FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS

Sequences:

>Translated_230_residues
MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI
FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS
FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS
>Mature_230_residues
MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI
FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS
FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24445; Mature: 24445

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLPMGEAIGSNLPKHGSLIFIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNIL
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE
IVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLSFITPAEFRAISFDAGGVTTG
EEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC
PMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLPMGEAIGSNLPKHGSLIFIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNIL
CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE
IVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLSFITPAEFRAISFDAGGVTTG
EEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC
PMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA