| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227034
Identifier: 21227034
GI number: 21227034
Start: 1098503
End: 1099195
Strand: Reverse
Name: 21227034
Synonym: MM_0932
Alternate gene names: NA
Gene position: 1099195-1098503 (Counterclockwise)
Preceding gene: 21227035
Following gene: 21227033
Centisome position: 26.83
GC content: 45.31
Gene sequence:
>693_bases ATGAGAGATTTTAAAGAGACTTTTCTTGAAGTTATTCAGGCGGTATTGCCTCTAACACTGGCGGTGATAGTGATCATGCT GGTATTTCTCGGCTCGAACCTGGGACATCTGGCGTCCTTCCTGACCGGGACAATAATGGTCATAGCAGGAATGACTTTTT TTCTTATGGGGGTCAAACTGGGCATGCTGCCAATGGGTGAAGCGATAGGGTCTAATTTGCCAAAGCACGGATCACTGATA TTTATTGCAGTTGCAGCATTTTTTCTCTCTTTTCTGACAACTGTTGCGGAACCCGATGTAAGAGTCCTGAGCAGCATGAT CGATTCAGTCTCAAAAGACAGCATAGACAGAAATATACTGATAGTATCAATAGGTGTTGGAGTAGGGTTTTTTGTGACCG TTTCCATCCTCAGGATAATTTACGGAATCCCTATAAAATATCTTTTTGCAATAAGCTACCTTCTCATAATCTTTCTGTCC TTTATCACACCGGCGGAGTTCCGTGCTATTTCTTTTGATGCGGGAGGTGTGACCACCGGACCAATGACCGTGCCTGTAAT TATGGCACTGGGGATCGGGACAGCTTCGGTACTGCAGGAAAGATCCCAGCTTTCTGAAGGGTTTGGGCTCATTGGTTTTG CCTCTATAGGTCCCATACTCAGCCTGATGCTACTGGGGGTACTGTCTTCATGA
Upstream 100 bases:
>100_bases TAGATTCCAATTCAGTCTCGTTAATTAAATATTTTTGAATATTTCCGCTTTTCACGTTTATGGCTACCTTTCATTATTTA TCTGGTGGAAAATTCTTATG
Downstream 100 bases:
>100_bases GTGGAAGTACAGAAGGGATACTGTCTGTAGTTGTCGAAGTAAGTCAGGCACTTATCCCTCTTGTGATATTTTTTATCGTA TTCCAGCGCCTGTACCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS
Sequences:
>Translated_230_residues MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS >Mature_230_residues MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKLGMLPMGEAIGSNLPKHGSLI FIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNILIVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLS FITPAEFRAISFDAGGVTTGPMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24445; Mature: 24445
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GMLPMGEAIGSNLPKHGSLIFIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNIL CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE IVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLSFITPAEFRAISFDAGGVTTG EEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC PMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDFKETFLEVIQAVLPLTLAVIVIMLVFLGSNLGHLASFLTGTIMVIAGMTFFLMGVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GMLPMGEAIGSNLPKHGSLIFIAVAAFFLSFLTTVAEPDVRVLSSMIDSVSKDSIDRNIL CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEE IVSIGVGVGFFVTVSILRIIYGIPIKYLFAISYLLIIFLSFITPAEFRAISFDAGGVTTG EEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCC PMTVPVIMALGIGTASVLQERSQLSEGFGLIGFASIGPILSLMLLGVLSS CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA