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The map label for this gene is yaaH [C]

Identifier: 21227005

GI number: 21227005

Start: 1067609

End: 1068211

Strand: Reverse

Name: yaaH [C]

Synonym: MM_0903

Alternate gene names: 21227005

Gene position: 1068211-1067609 (Counterclockwise)

Preceding gene: 21227008

Following gene: 21227004

Centisome position: 26.08

GC content: 43.95

Gene sequence:

>603_bases
ATGAGTCAAAACATTAAAGATGTTATGGACATTCGTGACATAAAAATCAAGGATTTAACCGCAAACCCCGCTCCACTGGG
TTTGATGGGGTTCGGAATGACAACTGTGCTTTTAAATATACACAATGCAGGTTTCTATCCGATGAATGCAATGATTCTTT
CAATGGGCTTTTTCTATGGTGGATTGGCTCAGGTCATTGCAGGGATTCAGGAATGGAAGAAAGGTAATACGTTCGGAGCA
ACGGCTTTTACCTCATACGGGCTTTTCTGGCTCACACTGGTAGGAATTGTCCTGCTTCCCAAGTCTGAAAGCTATGCAGG
GCTGGCCACGGAGTCATTCCCATTTGCTGCATATCTTTTCATGTGGGGAGTTTTCACTCTTTTCATGTTCATAGGCACGC
TAAAAGGATCAAAAGCTCTCTCTGTTGTTTTTTTTACCCTTACAATCCTGTTCTTCTTGCTGGCTGCAGGCAACTACCTT
GGAAGTGAATCAATACTCGTGATCGCAGGTTATGAAGGAATCCTCACAGGACTTTCCGCAATATATGCAGCTCTTGGCCA
GGTGTTGAACGAGGCTTACGGGAAAAAGATAGTTCCCCTCTAA

Upstream 100 bases:

>100_bases
AGGTGAAAAAGAGACATCCTGAAAGGGAGGGTGTCTCCTCGTATTATTTATTGGAAGTTCAGGCGAAATCTCCGGTTAAC
GGGAAGGAGGATTGGATTTT

Downstream 100 bases:

>100_bases
AAACATTTGCAGGTTTCTACATGTTTATTCCGGGCTTTTTAGCCCTAATTTTTTCTTTAATTTTTTTTCTCTCCATCATC
TTTTCATTTACTCTCATCAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSQNIKDVMDIRDIKIKDLTANPAPLGLMGFGMTTVLLNIHNAGFYPMNAMILSMGFFYGGLAQVIAGIQEWKKGNTFGA
TAFTSYGLFWLTLVGIVLLPKSESYAGLATESFPFAAYLFMWGVFTLFMFIGTLKGSKALSVVFFTLTILFFLLAAGNYL
GSESILVIAGYEGILTGLSAIYAALGQVLNEAYGKKIVPL

Sequences:

>Translated_200_residues
MSQNIKDVMDIRDIKIKDLTANPAPLGLMGFGMTTVLLNIHNAGFYPMNAMILSMGFFYGGLAQVIAGIQEWKKGNTFGA
TAFTSYGLFWLTLVGIVLLPKSESYAGLATESFPFAAYLFMWGVFTLFMFIGTLKGSKALSVVFFTLTILFFLLAAGNYL
GSESILVIAGYEGILTGLSAIYAALGQVLNEAYGKKIVPL
>Mature_199_residues
SQNIKDVMDIRDIKIKDLTANPAPLGLMGFGMTTVLLNIHNAGFYPMNAMILSMGFFYGGLAQVIAGIQEWKKGNTFGAT
AFTSYGLFWLTLVGIVLLPKSESYAGLATESFPFAAYLFMWGVFTLFMFIGTLKGSKALSVVFFTLTILFFLLAAGNYLG
SESILVIAGYEGILTGLSAIYAALGQVLNEAYGKKIVPL

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=184, Percent_Identity=58.695652173913, Blast_Score=208, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6324329, Length=175, Percent_Identity=36, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6319855, Length=124, Percent_Identity=38.7096774193548, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 21622; Mature: 21491

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNIKDVMDIRDIKIKDLTANPAPLGLMGFGMTTVLLNIHNAGFYPMNAMILSMGFFYG
CCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GLAQVIAGIQEWKKGNTFGATAFTSYGLFWLTLVGIVLLPKSESYAGLATESFPFAAYLF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
MWGVFTLFMFIGTLKGSKALSVVFFTLTILFFLLAAGNYLGSESILVIAGYEGILTGLSA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHH
IYAALGQVLNEAYGKKIVPL
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQNIKDVMDIRDIKIKDLTANPAPLGLMGFGMTTVLLNIHNAGFYPMNAMILSMGFFYG
CCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GLAQVIAGIQEWKKGNTFGATAFTSYGLFWLTLVGIVLLPKSESYAGLATESFPFAAYLF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
MWGVFTLFMFIGTLKGSKALSVVFFTLTILFFLLAAGNYLGSESILVIAGYEGILTGLSA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHH
IYAALGQVLNEAYGKKIVPL
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]