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The map label for this gene is 21226995

Identifier: 21226995

GI number: 21226995

Start: 1054360

End: 1055025

Strand: Direct

Name: 21226995

Synonym: MM_0893

Alternate gene names: NA

Gene position: 1054360-1055025 (Clockwise)

Preceding gene: 21226990

Following gene: 21226996

Centisome position: 25.74

GC content: 48.65

Gene sequence:

>666_bases
ATGCATATACCTGATTCTTTTATACCGCTAAGCCAGGCAATAGTTTACTGGGTAATTAGCATTCCTTTTATTTTTATGTC
AATGAAATGGGCAAAAAGTGAGCTTGAAGAGATGAAAGTGCCCATCCTTGCTGCCCTTGCAGCAGGAATATTTGCTATTC
AGGCCATGAACATCCCTATAGGGATGGGAACAAGCGGGCACATGGTAGGAGCAACTCTTGTTGCCATTGTTTTCGGAAGC
CCCTGGGCTGGAGTACTGGTTCTCACACTCGTGTTGCTTGTACAGGGTTTCGCATTCGGAGACGGTGGAATCACCACCAT
GGGAGCAAATATCCTTAACATGGGCATTATTTCCGGCTTTGCAGGATACTATACATATCTAGCTCTCCGCAAGAGTGCAG
GAACAAGCATTGCAGCCTTCGGAGGCGCATGGTTAGGACTTTTCGTTTCATCAATTGTTTGCGCCGTGCAGATGTGGCTT
GCAGGCACTTTCCCTCTGGTACCCGGGCTTATCGCTATGGGAACTTTCCACCTGATAATTGGCTTTATCGGGGAAGGGCT
GATCACTTCGGTCGTGATCACGGCGATTGCAAAATCCCGTCCTGACCTGCTTGAAGGCGGGTACACTGCCAGACCTGAGA
AATCCAAGACGGAGGCTCATGCATGA

Upstream 100 bases:

>100_bases
TTCTTTATACAATGAATATTCCGAAAAATGTGGGAACTGGAATGTTCACAGTGAAAACGGGAAAGACAAGATATAAGATT
CAAGGAGAGGAAAAATAAAA

Downstream 100 bases:

>100_bases
GCAAAAACTCAAATATGAAATTCCTTTACGCAGGAATCGCAATTGCGCTTTTGCTTTCCATCCTTGCTCCTTTCCTTGCC
TCTTCCGACCCCGACGGGCT

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MHIPDSFIPLSQAIVYWVISIPFIFMSMKWAKSELEEMKVPILAALAAGIFAIQAMNIPIGMGTSGHMVGATLVAIVFGS
PWAGVLVLTLVLLVQGFAFGDGGITTMGANILNMGIISGFAGYYTYLALRKSAGTSIAAFGGAWLGLFVSSIVCAVQMWL
AGTFPLVPGLIAMGTFHLIIGFIGEGLITSVVITAIAKSRPDLLEGGYTARPEKSKTEAHA

Sequences:

>Translated_221_residues
MHIPDSFIPLSQAIVYWVISIPFIFMSMKWAKSELEEMKVPILAALAAGIFAIQAMNIPIGMGTSGHMVGATLVAIVFGS
PWAGVLVLTLVLLVQGFAFGDGGITTMGANILNMGIISGFAGYYTYLALRKSAGTSIAAFGGAWLGLFVSSIVCAVQMWL
AGTFPLVPGLIAMGTFHLIIGFIGEGLITSVVITAIAKSRPDLLEGGYTARPEKSKTEAHA
>Mature_221_residues
MHIPDSFIPLSQAIVYWVISIPFIFMSMKWAKSELEEMKVPILAALAAGIFAIQAMNIPIGMGTSGHMVGATLVAIVFGS
PWAGVLVLTLVLLVQGFAFGDGGITTMGANILNMGIISGFAGYYTYLALRKSAGTSIAAFGGAWLGLFVSSIVCAVQMWL
AGTFPLVPGLIAMGTFHLIIGFIGEGLITSVVITAIAKSRPDLLEGGYTARPEKSKTEAHA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23199; Mature: 23199

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPDSFIPLSQAIVYWVISIPFIFMSMKWAKSELEEMKVPILAALAAGIFAIQAMNIPI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
GMGTSGHMVGATLVAIVFGSPWAGVLVLTLVLLVQGFAFGDGGITTMGANILNMGIISGF
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AGYYTYLALRKSAGTSIAAFGGAWLGLFVSSIVCAVQMWLAGTFPLVPGLIAMGTFHLII
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GFIGEGLITSVVITAIAKSRPDLLEGGYTARPEKSKTEAHA
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIPDSFIPLSQAIVYWVISIPFIFMSMKWAKSELEEMKVPILAALAAGIFAIQAMNIPI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
GMGTSGHMVGATLVAIVFGSPWAGVLVLTLVLLVQGFAFGDGGITTMGANILNMGIISGF
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AGYYTYLALRKSAGTSIAAFGGAWLGLFVSSIVCAVQMWLAGTFPLVPGLIAMGTFHLII
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GFIGEGLITSVVITAIAKSRPDLLEGGYTARPEKSKTEAHA
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]