| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226993
Identifier: 21226993
GI number: 21226993
Start: 1051865
End: 1052746
Strand: Reverse
Name: 21226993
Synonym: MM_0891
Alternate gene names: NA
Gene position: 1052746-1051865 (Counterclockwise)
Preceding gene: 21226994
Following gene: 21226992
Centisome position: 25.7
GC content: 42.29
Gene sequence:
>882_bases ATGACCAGCCTGCTGAGTGAAGAAGGCAGTAATTTTACACCTCTATTTCAGGAATGTGGGCCAAATTCATGCAATATACA AAACATAAAGTCCTGCATACTGCATTTCCACAGTAATATTATATCCTGTAATATGAATCTAATTGCCGAGTTTAATCTTC CTCACCTTTATGATATCTTCGCCGAACTGGATGAACTCGCGCATATGGATGTTGAAGATGATGTCTTTCAGGATGTACTC CGGGATCCTGTGATCAGAGCCCTGCTTCCTTCCATTCATGCCAGTTACACCCTTTTCTTCAGTCTGCATGAAACCAGGCT TGCAAAGGAACTCCTGACCTGTAAAGAACCCTGGAAAACGCTGGAATCTTTTCCTTTATATCCCAGATATGAAAATATGA TTAAAAGTCATATAGATTATTTCCCTGAAATTGAAGTCCTGGCTTTTATAGGCTGCGGCCCCGTGCCTATTACCCTGCTG CTTTTCAATAAATTGTATGGCATCCGCTGCATCGGCATAGATAAAGATCCTGAAGCTGTGTCTCTGGCAAAAAGCTGTGT AAAGCATTTTGGGCTTGCAAAGGAAATCAGTATTATTGAAGGAGATGAAACCGCGCTTTCAGATCTCGAATGGGACTCTG TACTTATAGCAGGGCTTGCCGAACCCAAAAAGCGTATTTTCCGAAATCTCCACTCCATAATCAAAAATCGAGAGCCAGAA TGTAAAAAATCAGTTTCCATCTGCTATCGTAATTATAGTGGCATGAGACAGTTGCTCTATCGTCCGGTCCTGCCCGAGCA GACAGGAGGCTTTAGACTAATAAAAGAAGTCTGCCCCGCTGGAAAAGAAAACAATACTCTGGTCTTTCTGGAGTGTGAGT AA
Upstream 100 bases:
>100_bases TCACATTTTCAGAACCGGTGTTGAATTTGTATCTATGTATTCGTTAATACGGTTTTGGTGAATTAAAAATGGTTTGGTGA ATTAAAATGGATTTGATATC
Downstream 100 bases:
>100_bases CATTCAAAAAATCAGAGCAGAACTCCTGATTGATGAATTTCGCAGCATCTATTCCCGGGTAAAGGGCCTTGAAGATGCCG AAGTGATGGGAAGTCCCTCT
Product: putative methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTSLLSEEGSNFTPLFQECGPNSCNIQNIKSCILHFHSNIISCNMNLIAEFNLPHLYDIFAELDELAHMDVEDDVFQDVL RDPVIRALLPSIHASYTLFFSLHETRLAKELLTCKEPWKTLESFPLYPRYENMIKSHIDYFPEIEVLAFIGCGPVPITLL LFNKLYGIRCIGIDKDPEAVSLAKSCVKHFGLAKEISIIEGDETALSDLEWDSVLIAGLAEPKKRIFRNLHSIIKNREPE CKKSVSICYRNYSGMRQLLYRPVLPEQTGGFRLIKEVCPAGKENNTLVFLECE
Sequences:
>Translated_293_residues MTSLLSEEGSNFTPLFQECGPNSCNIQNIKSCILHFHSNIISCNMNLIAEFNLPHLYDIFAELDELAHMDVEDDVFQDVL RDPVIRALLPSIHASYTLFFSLHETRLAKELLTCKEPWKTLESFPLYPRYENMIKSHIDYFPEIEVLAFIGCGPVPITLL LFNKLYGIRCIGIDKDPEAVSLAKSCVKHFGLAKEISIIEGDETALSDLEWDSVLIAGLAEPKKRIFRNLHSIIKNREPE CKKSVSICYRNYSGMRQLLYRPVLPEQTGGFRLIKEVCPAGKENNTLVFLECE >Mature_292_residues TSLLSEEGSNFTPLFQECGPNSCNIQNIKSCILHFHSNIISCNMNLIAEFNLPHLYDIFAELDELAHMDVEDDVFQDVLR DPVIRALLPSIHASYTLFFSLHETRLAKELLTCKEPWKTLESFPLYPRYENMIKSHIDYFPEIEVLAFIGCGPVPITLLL FNKLYGIRCIGIDKDPEAVSLAKSCVKHFGLAKEISIIEGDETALSDLEWDSVLIAGLAEPKKRIFRNLHSIIKNREPEC KKSVSICYRNYSGMRQLLYRPVLPEQTGGFRLIKEVCPAGKENNTLVFLECE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33375; Mature: 33244
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS51142 NAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLLSEEGSNFTPLFQECGPNSCNIQNIKSCILHFHSNIISCNMNLIAEFNLPHLYDIF CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCEEEEECCCCHHHHHH AELDELAHMDVEDDVFQDVLRDPVIRALLPSIHASYTLFFSLHETRLAKELLTCKEPWKT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH LESFPLYPRYENMIKSHIDYFPEIEVLAFIGCGPVPITLLLFNKLYGIRCIGIDKDPEAV HHHCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHCEEEEECCCCCHHH SLAKSCVKHFGLAKEISIIEGDETALSDLEWDSVLIAGLAEPKKRIFRNLHSIIKNREPE HHHHHHHHHCCCHHHEEEECCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH CKKSVSICYRNYSGMRQLLYRPVLPEQTGGFRLIKEVCPAGKENNTLVFLECE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC >Mature Secondary Structure TSLLSEEGSNFTPLFQECGPNSCNIQNIKSCILHFHSNIISCNMNLIAEFNLPHLYDIF CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCEEEEECCCCHHHHHH AELDELAHMDVEDDVFQDVLRDPVIRALLPSIHASYTLFFSLHETRLAKELLTCKEPWKT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH LESFPLYPRYENMIKSHIDYFPEIEVLAFIGCGPVPITLLLFNKLYGIRCIGIDKDPEAV HHHCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHCEEEEECCCCCHHH SLAKSCVKHFGLAKEISIIEGDETALSDLEWDSVLIAGLAEPKKRIFRNLHSIIKNREPE HHHHHHHHHCCCHHHEEEECCCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH CKKSVSICYRNYSGMRQLLYRPVLPEQTGGFRLIKEVCPAGKENNTLVFLECE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA