Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226978

Identifier: 21226978

GI number: 21226978

Start: 1035461

End: 1036198

Strand: Direct

Name: 21226978

Synonym: MM_0876

Alternate gene names: NA

Gene position: 1035461-1036198 (Clockwise)

Preceding gene: 21226977

Following gene: 21226979

Centisome position: 25.28

GC content: 37.8

Gene sequence:

>738_bases
ATGAAGAAACTTAAAATAAGTGCATTGTTTATGGCAGTACTTCTTGTAAGTGTTGCTTTTGTTCCGGCTGTGAGTGCACA
GGCCGGATCGCAAAATAAAGAGTATGTTGATGCGATAGACATTTCGAACAACATCCCAATTTCTGAAGAGGACCTCAAAA
AAGCAATGGAAAAAGTGAGTGAAACATCAAAAAACATGAATGTATTGAAAGAAACCGATAAAGAAAAGATAGTATCTTTC
AAAAAAGATGATGGATCAATTGCATACGTGATTTCATGGGCAGATGAAAAGAATCCTAATAGAACAAATTTTGCTTTTGT
GGATCAGAGTGAATTAGTATCCAAAAAACTCATATCTACTGCAAGTCTAAATGATAGTTCGGCAGTTGCAACAGTAATTT
CTGCCGCTAAGGTAAGTTTTTGGAATGGAAGTTATCTTGAAACATATGGATCTGCAACAACAGGTGGGGTGCATATTCAT
TTCTCGGCAAAAGATGGGCTCTGGCTTGCTGGTGGTGCTGCAACTGCTGCTGTACTTCTTGGAATAATACTCGATGGACC
GTTGCCTTTTGGTGATGCAATAGGCGCTTTGGTGGCTTTTGGAATAGCAACATTTTATTGGGCAGAATCAAATTCTGACA
ATAGTATAGACGTTAGTATACCTTATGCAAATGCGCTCCAATATCCATTAACAGGCCATGTTAGTATGAAAATTGGTTCA
CATTGGTACACAATTTAA

Upstream 100 bases:

>100_bases
ATTGCAGACTTGAAAGGAGCATGAAAAATCATCAGTTTGATGATCTGGCTAGAAAAATTTATAAGGAGTGAACAAAGAGT
AATTAAACAGGAGTGAAATT

Downstream 100 bases:

>100_bases
CCAATTTAATTAACCATTTGGCTGATATTATAATCAGCCTGGCTGATATTACAATCAGCCAAATTTAATTTAGAGGGATA
TTATGGAAAAAAAGAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF
KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH
FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS
HWYTI

Sequences:

>Translated_245_residues
MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF
KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH
FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS
HWYTI
>Mature_245_residues
MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF
KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH
FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS
HWYTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26209; Mature: 26209

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
ETSKNMNVLKETDKEKIVSFKKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLIST
HHHHHHHHHHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHH
ASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIHFSAKDGLWLAGGAATAAVLL
CCCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCCCCEEEEEECCCCEEEECCHHHHHHHH
GIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS
HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECC
HWYTI
EEECC
>Mature Secondary Structure
MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
ETSKNMNVLKETDKEKIVSFKKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLIST
HHHHHHHHHHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHH
ASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIHFSAKDGLWLAGGAATAAVLL
CCCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCCCCEEEEEECCCCEEEECCHHHHHHHH
GIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS
HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECC
HWYTI
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA