Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226966

Identifier: 21226966

GI number: 21226966

Start: 1019681

End: 1021657

Strand: Direct

Name: 21226966

Synonym: MM_0864

Alternate gene names: NA

Gene position: 1019681-1021657 (Clockwise)

Preceding gene: 21226965

Following gene: 161485679

Centisome position: 24.89

GC content: 45.42

Gene sequence:

>1977_bases
GTGATTAGACAACCGAATGTCATTCTGGGGAATGACGAGCTTCTTGTGACAATGGGAAGAAAAGGAGAAATCCTTGGCTT
ATTTTATCCCCGCAGAGACCATGCCCAGCACGTAGAAGAATCCCTTGCCTGCATTCACACAGGAGAAAGACTTCTCTGGA
CAAACGATAACGAATGGCACTCGATTCAGAACTACATAGAAGATACCAATATAGTATCAACAAAACTTTACCATGATTCC
GGGATAAGAATCTCTATTCTTGACCTTGTACACCCTGAAGTCCCGGTCCTTATCCGCAGGTTCAAAGTACAGTCCCAGCA
AAAAATTTCCGGAAAATTCTTCTATTACTCGAACCTGAATGTGGGGGAAACTTCCAAAAAAAATTCGGCTTTCTGTGATT
CAGAAGCCAGACTTCTTGCCCAGTACTGGCAGGATTATTACATCGGGATCTATGCTCTGCCTGAGTTTACGGAGTGGCAG
GTCGGAAAGGCGATGGACACCATCTGGTGGACAAATTCCAAGTATGATATGGAAGACGGGAAACTCCAGAGAAATAAAGA
AGATATAGGAAACATTAACAATGCTGCGGGCTGGGACCTCGAGCTGGAAGCTGACGGGGCAAACGAATTTGTCATCTTTA
TAGGAGCCGCATCTTCCCGAAGCCTCCTGTACAAAAGGATGCGAGAGCTGTCCAAACTGCCTCTGGAACACATCTTTGAA
AAGACACGGGAATACTGGGTGATGTGGCTATCGAAAAAGCATGTACTCAAAATGCCCGGAATAGAAGGACACAATAACCT
GCGCCAGGAGCTTTTCAATGCTTACAACAGGTCTCTTCTCATGCTTTACCTCCTGAACGACCGTGTAAACGGGTCTTTTG
TAGCCGCTCCGGAATTTGATTCAAATTTTGAAAAATGCGGAGGATACGGTTTTTGCTGGAACAGAGACACCTCGGAACTG
GTTCTTGCCCTCAAACATTCCGGATATCCTGATTATTGTGACAGGTTTTTTAAATGGTGCATCAGGACGCAGCTGCCTGA
TGGTTCCTGGTTCCAGAGATACTGGCTCAATGGGGACATAGCCCCTTCCTGGGGAAATTTTGACTACTCGACTCAGATAG
ATGAGACCGGAGCCACACTTCATGCCATGGACGTTTATTACAGGATTCTTGAAGGGCTTAAAAAGGTAGAGTTTCTGGAA
GAAGTATGGGTCTCAGTCCTCAGGGCTGCTGAATACCTTATGAAAAGGACAAAATCCGGCCTGCATGAAAGCTGCATGGA
CCTGTGGGAGACATATTACGGGATTTTCACCTACACAAATGCTTCAATCTATGCAGGGCTTATGGGTGCCTCTCACCTTG
CAGAAGAAAACGGCGAGTCCGGAATGGCAAGGCGCTGGAAAAAAAGGGCTGATTTCATAAAACAGGCTACAATTGACCGT
TTCTGGCTTCAGGAAGGTTATTTTGCAAAAGGGATAATTCACGAAAAGCTTGACAAGACCCTTGATGCAAGTGTTCTGGG
AGCTTATATTCCTTTTAGAATGATCTCTCCTGAAGATCCTGTAGAAAGGGACATGATTCTTTTTCTGATAGAAAATATCC
AGAAGAAGCTTTCAATTCCCATCAATAATGGTTATGGAATCAAGCGTTACGAAAATGACACTTATATTGACGGAAATCCC
TGGATAGTAACAACACTCTGGCTCTCGGAAGCTATGTTCGCTTTTGCACTTGACCTGCCGGAAGGAGCAGGAGACCAGTA
TGCTGAGGAGGCAAAAAAGCTGACCGAGGAAGGAATAAAATGCCTCAGATGGGCTCTTGCCGGAGCTACAAGTACGGGCC
TTCTCCCTGAACAGGTGGATAAGTCTACAGGCAAGTCGGCGTGGGCAATCCCTCTCGGCTGGAGCGGGGCTCTTATGCTT
AACAATATTATTCTCTTTGATAAAATTTGTAGAAGAAACGCAGGAAATCAGGAGTAA

Upstream 100 bases:

>100_bases
AAGTCAGCTGTAAAGCCACCGGGAAGAATGTCTGCGAACATATAATTTCACTGGCTCCTACCAGCCCGGATCAGCAAAAC
CAGCTCAGAGGGGAGATTAA

Downstream 100 bases:

>100_bases
AGCTCAGGAGAAAAAACGAACAACTGGAAAAAAATCAGATTATAGAGCCTGCAATCGCTTCCACAATTATTAAATTCCTT
CACGCACAGCTTTTGGCTCG

Product: glucoamylase

Products: D-glucuronate; alcohol

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS
GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ
VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE
KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL
VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE
EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR
FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP
WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML
NNIILFDKICRRNAGNQE

Sequences:

>Translated_658_residues
MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS
GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ
VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE
KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL
VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE
EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR
FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP
WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML
NNIILFDKICRRNAGNQE
>Mature_658_residues
MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS
GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ
VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE
KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL
VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE
EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR
FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP
WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML
NNIILFDKICRRNAGNQE

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 15 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR006465
- InterPro:   IPR000165
- InterPro:   IPR011613 [H]

Pfam domain/function: PF00723 Glyco_hydro_15 [H]

EC number: 3.2.1.3

Molecular weight: Translated: 75933; Mature: 75933

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWH
CCCCCCEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHH
SIQNYIEDTNIVSTKLYHDSGIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLN
HHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
VGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQVGKAMDTIWWTNSKYDMEDG
CCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHCCHHHHEEECCCCCCCCCC
KLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE
CCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH
KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFD
HHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCC
SNFEKCGGYGFCWNRDTSELVLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDI
CCHHHHCCCCEEECCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
APSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLEEVWVSVLRAAEYLMKRTKSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHEECC
INNGYGIKRYENDTYIDGNPWIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIK
CCCCCCCEEECCCCEECCCCEEEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
CLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALMLNNIILFDKICRRNAGNQE
HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWH
CCCCCCEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHH
SIQNYIEDTNIVSTKLYHDSGIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLN
HHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC
VGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQVGKAMDTIWWTNSKYDMEDG
CCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHCCHHHHEEECCCCCCCCCC
KLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE
CCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH
KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFD
HHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCC
SNFEKCGGYGFCWNRDTSELVLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDI
CCHHHHCCCCEEECCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
APSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLEEVWVSVLRAAEYLMKRTKSG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR
HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHEECC
INNGYGIKRYENDTYIDGNPWIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIK
CCCCCCCEEECCCCEECCCCEEEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH
CLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALMLNNIILFDKICRRNAGNQE
HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; beta-D-glucuronoside

Specific reaction: H2O + a beta-D-glucuronoside = D-glucuronate + an alcohol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]