| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226966
Identifier: 21226966
GI number: 21226966
Start: 1019681
End: 1021657
Strand: Direct
Name: 21226966
Synonym: MM_0864
Alternate gene names: NA
Gene position: 1019681-1021657 (Clockwise)
Preceding gene: 21226965
Following gene: 161485679
Centisome position: 24.89
GC content: 45.42
Gene sequence:
>1977_bases GTGATTAGACAACCGAATGTCATTCTGGGGAATGACGAGCTTCTTGTGACAATGGGAAGAAAAGGAGAAATCCTTGGCTT ATTTTATCCCCGCAGAGACCATGCCCAGCACGTAGAAGAATCCCTTGCCTGCATTCACACAGGAGAAAGACTTCTCTGGA CAAACGATAACGAATGGCACTCGATTCAGAACTACATAGAAGATACCAATATAGTATCAACAAAACTTTACCATGATTCC GGGATAAGAATCTCTATTCTTGACCTTGTACACCCTGAAGTCCCGGTCCTTATCCGCAGGTTCAAAGTACAGTCCCAGCA AAAAATTTCCGGAAAATTCTTCTATTACTCGAACCTGAATGTGGGGGAAACTTCCAAAAAAAATTCGGCTTTCTGTGATT CAGAAGCCAGACTTCTTGCCCAGTACTGGCAGGATTATTACATCGGGATCTATGCTCTGCCTGAGTTTACGGAGTGGCAG GTCGGAAAGGCGATGGACACCATCTGGTGGACAAATTCCAAGTATGATATGGAAGACGGGAAACTCCAGAGAAATAAAGA AGATATAGGAAACATTAACAATGCTGCGGGCTGGGACCTCGAGCTGGAAGCTGACGGGGCAAACGAATTTGTCATCTTTA TAGGAGCCGCATCTTCCCGAAGCCTCCTGTACAAAAGGATGCGAGAGCTGTCCAAACTGCCTCTGGAACACATCTTTGAA AAGACACGGGAATACTGGGTGATGTGGCTATCGAAAAAGCATGTACTCAAAATGCCCGGAATAGAAGGACACAATAACCT GCGCCAGGAGCTTTTCAATGCTTACAACAGGTCTCTTCTCATGCTTTACCTCCTGAACGACCGTGTAAACGGGTCTTTTG TAGCCGCTCCGGAATTTGATTCAAATTTTGAAAAATGCGGAGGATACGGTTTTTGCTGGAACAGAGACACCTCGGAACTG GTTCTTGCCCTCAAACATTCCGGATATCCTGATTATTGTGACAGGTTTTTTAAATGGTGCATCAGGACGCAGCTGCCTGA TGGTTCCTGGTTCCAGAGATACTGGCTCAATGGGGACATAGCCCCTTCCTGGGGAAATTTTGACTACTCGACTCAGATAG ATGAGACCGGAGCCACACTTCATGCCATGGACGTTTATTACAGGATTCTTGAAGGGCTTAAAAAGGTAGAGTTTCTGGAA GAAGTATGGGTCTCAGTCCTCAGGGCTGCTGAATACCTTATGAAAAGGACAAAATCCGGCCTGCATGAAAGCTGCATGGA CCTGTGGGAGACATATTACGGGATTTTCACCTACACAAATGCTTCAATCTATGCAGGGCTTATGGGTGCCTCTCACCTTG CAGAAGAAAACGGCGAGTCCGGAATGGCAAGGCGCTGGAAAAAAAGGGCTGATTTCATAAAACAGGCTACAATTGACCGT TTCTGGCTTCAGGAAGGTTATTTTGCAAAAGGGATAATTCACGAAAAGCTTGACAAGACCCTTGATGCAAGTGTTCTGGG AGCTTATATTCCTTTTAGAATGATCTCTCCTGAAGATCCTGTAGAAAGGGACATGATTCTTTTTCTGATAGAAAATATCC AGAAGAAGCTTTCAATTCCCATCAATAATGGTTATGGAATCAAGCGTTACGAAAATGACACTTATATTGACGGAAATCCC TGGATAGTAACAACACTCTGGCTCTCGGAAGCTATGTTCGCTTTTGCACTTGACCTGCCGGAAGGAGCAGGAGACCAGTA TGCTGAGGAGGCAAAAAAGCTGACCGAGGAAGGAATAAAATGCCTCAGATGGGCTCTTGCCGGAGCTACAAGTACGGGCC TTCTCCCTGAACAGGTGGATAAGTCTACAGGCAAGTCGGCGTGGGCAATCCCTCTCGGCTGGAGCGGGGCTCTTATGCTT AACAATATTATTCTCTTTGATAAAATTTGTAGAAGAAACGCAGGAAATCAGGAGTAA
Upstream 100 bases:
>100_bases AAGTCAGCTGTAAAGCCACCGGGAAGAATGTCTGCGAACATATAATTTCACTGGCTCCTACCAGCCCGGATCAGCAAAAC CAGCTCAGAGGGGAGATTAA
Downstream 100 bases:
>100_bases AGCTCAGGAGAAAAAACGAACAACTGGAAAAAAATCAGATTATAGAGCCTGCAATCGCTTCCACAATTATTAAATTCCTT CACGCACAGCTTTTGGCTCG
Product: glucoamylase
Products: D-glucuronate; alcohol
Alternate protein names: NA
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML NNIILFDKICRRNAGNQE
Sequences:
>Translated_658_residues MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML NNIILFDKICRRNAGNQE >Mature_658_residues MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWHSIQNYIEDTNIVSTKLYHDS GIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLNVGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQ VGKAMDTIWWTNSKYDMEDGKLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFDSNFEKCGGYGFCWNRDTSEL VLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDIAPSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLE EVWVSVLRAAEYLMKRTKSGLHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIPINNGYGIKRYENDTYIDGNP WIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIKCLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALML NNIILFDKICRRNAGNQE
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006465 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF00723 Glyco_hydro_15 [H]
EC number: 3.2.1.3
Molecular weight: Translated: 75933; Mature: 75933
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWH CCCCCCEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHH SIQNYIEDTNIVSTKLYHDSGIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLN HHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC VGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQVGKAMDTIWWTNSKYDMEDG CCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHCCHHHHEEECCCCCCCCCC KLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE CCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFD HHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCC SNFEKCGGYGFCWNRDTSELVLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDI CCHHHHCCCCEEECCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC APSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLEEVWVSVLRAAEYLMKRTKSG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHEECC INNGYGIKRYENDTYIDGNPWIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIK CCCCCCCEEECCCCEECCCCEEEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH CLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALMLNNIILFDKICRRNAGNQE HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIRQPNVILGNDELLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTGERLLWTNDNEWH CCCCCCEEECCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHH SIQNYIEDTNIVSTKLYHDSGIRISILDLVHPEVPVLIRRFKVQSQQKISGKFFYYSNLN HHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCC VGETSKKNSAFCDSEARLLAQYWQDYYIGIYALPEFTEWQVGKAMDTIWWTNSKYDMEDG CCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHCCHHHHEEECCCCCCCCCC KLQRNKEDIGNINNAAGWDLELEADGANEFVIFIGAASSRSLLYKRMRELSKLPLEHIFE CCCCCHHHHCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHH KTREYWVMWLSKKHVLKMPGIEGHNNLRQELFNAYNRSLLMLYLLNDRVNGSFVAAPEFD HHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCC SNFEKCGGYGFCWNRDTSELVLALKHSGYPDYCDRFFKWCIRTQLPDGSWFQRYWLNGDI CCHHHHCCCCEEECCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC APSWGNFDYSTQIDETGATLHAMDVYYRILEGLKKVEFLEEVWVSVLRAAEYLMKRTKSG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHESCMDLWETYYGIFTYTNASIYAGLMGASHLAEENGESGMARRWKKRADFIKQATIDR HHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH FWLQEGYFAKGIIHEKLDKTLDASVLGAYIPFRMISPEDPVERDMILFLIENIQKKLSIP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHEECC INNGYGIKRYENDTYIDGNPWIVTTLWLSEAMFAFALDLPEGAGDQYAEEAKKLTEEGIK CCCCCCCEEECCCCEECCCCEEEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHH CLRWALAGATSTGLLPEQVDKSTGKSAWAIPLGWSGALMLNNIILFDKICRRNAGNQE HHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; beta-D-glucuronoside
Specific reaction: H2O + a beta-D-glucuronoside = D-glucuronate + an alcohol
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]