| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226942
Identifier: 21226942
GI number: 21226942
Start: 995647
End: 997101
Strand: Direct
Name: 21226942
Synonym: MM_0840
Alternate gene names: NA
Gene position: 995647-997101 (Clockwise)
Preceding gene: 21226941
Following gene: 21226943
Centisome position: 24.31
GC content: 46.19
Gene sequence:
>1455_bases ATGAGTTACCTGGAAAAACTGATAAGGGCTATAAGTACTGATGGCTATGATTTTGCCACCGGTTCGCGAATAATGCCCGA AAGCGATGCAAAAAGGCCTTTCAAGCGCGAGTTTGCGAGCAGAGGATATAATTCCATGGTGAGGCTCTTTCTGCACTCAA AACTTTATGACCACCAGTGCGGTTTCAAGGCTTTCAGGAGAGGCCCTCTCTTGGAACTGCTCGATGAAATTGAGAACCAG CACTGGTTCTGGGACACTGAACTGCTTGTCAGGGCCCAGCACCGGGGCTACAGGGTCCTTGAGTTCCCTGTTTACTGGAG GCATGGAGGGTCAAGCAAGGTCAATTTCGCAAAGGATATCGTTGGAATGGGTTCGGAGGTCTTCCGCCTCTGGTGGGAAC TGTTTTTTCCGGGCTTATTTTCAGGAAAGGGCAAAATATTCCTGACAGCCTTTCTTGCAATTCTGATTCTTGCACTTGCT GCAACCTTTCTGGGCGCATCCGAGGTTCTGGAAAATATAAAACATGTCTCACCCGGAACACTGGCTCTTGCATCTTTTGT TTATTGCGCTTCCTGGCCCCTGAGAGGGATGCGTTTCCAGCAGATCCTTAACAGGCTTGGAAACCATTATGGAATTGGAT TTCTTACCGGGAGCATTTTCATCAGCCAGTCTGCAAACGTTATCCTTCCTGCAAGAATAGGAGACCTCAGCAGGATGTAT ATCCTGAAAAAAAGTAAAGACCTTGCCTTTACAACCAGCTTCTCCTCTCTGACCGTAGAAAGAGTCTTTGACATAATTGC AATTACCTTCATTGCCATACTTGCATCTTCAGGCGTGGCTTCCAGATTAGAGCTTACTCCCTGGATGGAGTCCCTGATTA AATTCTCAGGGGTTGCAGTCCTTCTTTTCTTCGCTGCTCTCTTTATATTATCTTATAGAGAGAGCCGTAATAAAAAGAAA GGAAAAGAAAAAGTTCATAAAAATATATCAGGCGAGCCTCTGAGTAAAATAAAAGAATTCGCTTCCACCTTTATCCGTCA GATGAGCGTTGTTGCAGTCAGGCCCGGGGCTTTTCTTGCAGTGGTCGCATCTTCCCTCCTTATATGGGGAATGGATATCT TTACCTGCTTTCTGGTTTTGAAAGCCTTTCCGGCGGCTGGAGTGGACATGACTTCAACTTTCAGCATATCCCTGGTTTTC CTTGCAGTAGCTCTCGGAAACATTGCGAAAACTTTTCCAATTACTCCCGGAGCCATAGGGACATATGAAGTTGCCCTTAC TGCAGTATTCGTACTAGGGGGGATCAAGCCTGAACTCGCATTTACTGTCGCCGTGATTGACCACATAATAAAGAATTCAA TCACACTTCTGGGAGGCGGGCTTGCCTTATCTGAACTGGGATTCAGATGGAGGGAAGTCCTTTCAACAAATACCGATACC CTGAAAGGAATGTGA
Upstream 100 bases:
>100_bases TTCCGATGAACGGCAGGGGAGAGGAAAGGCTCTGAACAGGGCTTTTAAGGCAGCCTCAGGGGAGGTACTCTGCTATATTG ATGTTGATCTTGCAACGGAT
Downstream 100 bases:
>100_bases GGTCACAAAGGGAGTCGTAAAAAACTACCGGACTGGAGCCGGATAGCCGAAAAAAGACTCTTCAGGCTTGAAAGAATGAA TGGTGCTAAGAGGTTCTGAA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Dolichyl-Phosphate Beta-Glucosyltransferase; Glycosyltransferase; Dolichol-P-Glucose Synthetase; Glycosyl Transferase Family 2 Protein; GtrA Family Protein; Polyprenol-Phosphate Glycosyltransferase; Glycosyltransferase AglD; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyltransferase; Glycolsyltransferase; Gtra-Like Glycosyl Transferase; Family Glycosyltransferase; Family 2 Glycosyl Transferase Protein; Family 2 Glycosyl Transferase; Glycosyltransferase D; Cell Wall Biogenesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSYLEKLIRAISTDGYDFATGSRIMPESDAKRPFKREFASRGYNSMVRLFLHSKLYDHQCGFKAFRRGPLLELLDEIENQ HWFWDTELLVRAQHRGYRVLEFPVYWRHGGSSKVNFAKDIVGMGSEVFRLWWELFFPGLFSGKGKIFLTAFLAILILALA ATFLGASEVLENIKHVSPGTLALASFVYCASWPLRGMRFQQILNRLGNHYGIGFLTGSIFISQSANVILPARIGDLSRMY ILKKSKDLAFTTSFSSLTVERVFDIIAITFIAILASSGVASRLELTPWMESLIKFSGVAVLLFFAALFILSYRESRNKKK GKEKVHKNISGEPLSKIKEFASTFIRQMSVVAVRPGAFLAVVASSLLIWGMDIFTCFLVLKAFPAAGVDMTSTFSISLVF LAVALGNIAKTFPITPGAIGTYEVALTAVFVLGGIKPELAFTVAVIDHIIKNSITLLGGGLALSELGFRWREVLSTNTDT LKGM
Sequences:
>Translated_484_residues MSYLEKLIRAISTDGYDFATGSRIMPESDAKRPFKREFASRGYNSMVRLFLHSKLYDHQCGFKAFRRGPLLELLDEIENQ HWFWDTELLVRAQHRGYRVLEFPVYWRHGGSSKVNFAKDIVGMGSEVFRLWWELFFPGLFSGKGKIFLTAFLAILILALA ATFLGASEVLENIKHVSPGTLALASFVYCASWPLRGMRFQQILNRLGNHYGIGFLTGSIFISQSANVILPARIGDLSRMY ILKKSKDLAFTTSFSSLTVERVFDIIAITFIAILASSGVASRLELTPWMESLIKFSGVAVLLFFAALFILSYRESRNKKK GKEKVHKNISGEPLSKIKEFASTFIRQMSVVAVRPGAFLAVVASSLLIWGMDIFTCFLVLKAFPAAGVDMTSTFSISLVF LAVALGNIAKTFPITPGAIGTYEVALTAVFVLGGIKPELAFTVAVIDHIIKNSITLLGGGLALSELGFRWREVLSTNTDT LKGM >Mature_483_residues SYLEKLIRAISTDGYDFATGSRIMPESDAKRPFKREFASRGYNSMVRLFLHSKLYDHQCGFKAFRRGPLLELLDEIENQH WFWDTELLVRAQHRGYRVLEFPVYWRHGGSSKVNFAKDIVGMGSEVFRLWWELFFPGLFSGKGKIFLTAFLAILILALAA TFLGASEVLENIKHVSPGTLALASFVYCASWPLRGMRFQQILNRLGNHYGIGFLTGSIFISQSANVILPARIGDLSRMYI LKKSKDLAFTTSFSSLTVERVFDIIAITFIAILASSGVASRLELTPWMESLIKFSGVAVLLFFAALFILSYRESRNKKKG KEKVHKNISGEPLSKIKEFASTFIRQMSVVAVRPGAFLAVVASSLLIWGMDIFTCFLVLKAFPAAGVDMTSTFSISLVFL AVALGNIAKTFPITPGAIGTYEVALTAVFVLGGIKPELAFTVAVIDHIIKNSITLLGGGLALSELGFRWREVLSTNTDTL KGM
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325029, Length=139, Percent_Identity=30.9352517985612, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53747; Mature: 53616
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLEKLIRAISTDGYDFATGSRIMPESDAKRPFKREFASRGYNSMVRLFLHSKLYDHQC CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC GFKAFRRGPLLELLDEIENQHWFWDTELLVRAQHRGYRVLEFPVYWRHGGSSKVNFAKDI CHHHHHCCCHHHHHHHHCCCCEEECHHHHHHHHCCCCEEEEECEEEECCCCCCCHHHHHH VGMGSEVFRLWWELFFPGLFSGKGKIFLTAFLAILILALAATFLGASEVLENIKHVSPGT HHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH LALASFVYCASWPLRGMRFQQILNRLGNHYGIGFLTGSIFISQSANVILPARIGDLSRMY HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEHEEEEECCCCEEEECCCCCHHHHH ILKKSKDLAFTTSFSSLTVERVFDIIAITFIAILASSGVASRLELTPWMESLIKFSGVAV HEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH LLFFAALFILSYRESRNKKKGKEKVHKNISGEPLSKIKEFASTFIRQMSVVAVRPGAFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHH VVASSLLIWGMDIFTCFLVLKAFPAAGVDMTSTFSISLVFLAVALGNIAKTFPITPGAIG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TYEVALTAVFVLGGIKPELAFTVAVIDHIIKNSITLLGGGLALSELGFRWREVLSTNTDT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHCCCHH LKGM HCCC >Mature Secondary Structure SYLEKLIRAISTDGYDFATGSRIMPESDAKRPFKREFASRGYNSMVRLFLHSKLYDHQC HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC GFKAFRRGPLLELLDEIENQHWFWDTELLVRAQHRGYRVLEFPVYWRHGGSSKVNFAKDI CHHHHHCCCHHHHHHHHCCCCEEECHHHHHHHHCCCCEEEEECEEEECCCCCCCHHHHHH VGMGSEVFRLWWELFFPGLFSGKGKIFLTAFLAILILALAATFLGASEVLENIKHVSPGT HHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH LALASFVYCASWPLRGMRFQQILNRLGNHYGIGFLTGSIFISQSANVILPARIGDLSRMY HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHEEHEEEEECCCCEEEECCCCCHHHHH ILKKSKDLAFTTSFSSLTVERVFDIIAITFIAILASSGVASRLELTPWMESLIKFSGVAV HEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHH LLFFAALFILSYRESRNKKKGKEKVHKNISGEPLSKIKEFASTFIRQMSVVAVRPGAFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHH VVASSLLIWGMDIFTCFLVLKAFPAAGVDMTSTFSISLVFLAVALGNIAKTFPITPGAIG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TYEVALTAVFVLGGIKPELAFTVAVIDHIIKNSITLLGGGLALSELGFRWREVLSTNTDT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHHHHHCCCHH LKGM HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA