Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226941

Identifier: 21226941

GI number: 21226941

Start: 992939

End: 995101

Strand: Direct

Name: 21226941

Synonym: MM_0839

Alternate gene names: NA

Gene position: 992939-995101 (Clockwise)

Preceding gene: 21226939

Following gene: 21226942

Centisome position: 24.24

GC content: 42.39

Gene sequence:

>2163_bases
GTGTCAGAATATCTGCATATAATTATATGGTTTTTTCTTATAGAAGCCCTGAGCTTTATTTCGGTTCCATTCATAAGAAG
TGCAGGAAACCGGCTTGCTGACGGAGGATATTCTGTTTCCAGAGCCCTCGGAATTATGCTTGTTACCTATCTTTCCTGGA
TTTTTTCGTATATACTGGGTTTCAGCTTTACAGCTGTCCTGATTGCATTTTTCCTTCTCTGCTCCGTATCCATTTTCCTT
TACAGGAAACAGAAATTTTTTCCGGGCAGGAAAGTTCTTGTAGTAAACGAACTGGTATTTGCATCAGGCTTCTTTTTTTT
TCTGCTTGTACGCACTTATCTGCCCGAGATATATAGACATGAAAAATTCATGGACTTTGCATTTTTAAATGCAGTAATAA
GGGCCAGCTCCTTTCCCCCTCAGGACCCATGGTTTGCAGGCGGGCTCATGGATTTTTATTACTATTTCGGGTATCTCTCA
GTAGCCGTATTTGGAAAACTCAGTGCAGTAAAACCTTCCATTCTTTTTAACCTGGCAGTCGCGCTGACTTTTGCCCTGTC
CCTGAACGCATTTTTCGGCATGGGATATAACCTTACACGTGGAAAAATCAGGTATGGAATATTGACTGCAGTTTTTGGGA
TGCTTCTTGGAAACCTGCAGGGGCTCATAGAATTTGTATCGGTGTACATCAGGCATGAGCAGGCCCTGGGAGGATACTAC
TGGAGCAGCTCAAGAGTCATCCCTTTTACAATAAACGAATTCCCGTACTTCAGCTTCATACACGGCGACCTTCACTCCCA
TATGCTTGCAATCCCTTTTCAGCTTCTTGTACTTGCGTTTCTCCTGAATATGCATTTCAGGAAAAATGAGGACTCAATAT
TTGAAAACAGCCTTGCACTTCTTATGTTTTCAATGTCTCTGGGTTTTTTATTCCCATTCAACTCCTGGGACTTTCCTGTA
TACTTCGGTCTGGCATTTCTTGTTATTTTTGCATTCTACTGCGGGGATTATGTCCATAATAGAAATTTATTCGCTGCTGT
TGCAAAATTTTCCAATTCGATGATCTTTATTTCCATTTTCAGTTTCCTTCCCTATTTGCTTTTTTACCTGGATTTTAATC
CTCAGGCAGCAGGAGGGTTTGATTTCGTCCTGCCTGAGTTAAGGACGGAGACTGATAGATTCCTGATTCTTTTCGGGCTT
TTTCTCTTCCTGGTATTTTCATTCCTTATCACCCGCCTGGACTCCAGAAGGAAAATAGTATTTTTTGTCCTGCTTGCAGG
GGTTTCAGCATTGCTTTCAAAAGCATGGTCTATTCCCCTGCTTGCAGTCCTTTTGCCTGTGTTTGTTTTTTCCCTGCTTC
TATTCCTTAAGGATATTCCTGAGCGGAGCGCGTCAGGGTTTGTATATCTCCTGATATCAGCAGCTAGCTTTATCGCTCTC
CTCTGCGAGGTTATTTTCCTTGACGACCCCATTTCCGGGGAGTTTGCCCGTATGAACACGGTTTTCAAATTTTATATGCA
CCTGTGGATCTTTCTTGCTATTTCAGCTGCTTATTCATATTATGACCTTAATTCCCATTACGCGGCCAGATCCGGAAACA
GAAAAACTTTGAAGCAGTTTGTAAAAAAAGGATGGTCAGTTATTCTTGTGATCCTGATAATCTGCTGCGCCATTTTTCCT
GCAGTATCGACCGTTACAAGAATAAAAGAGATGAATGCCGAACCTTCCCTTGACGGGATGGAGTACATGCGGGAACTGGA
CAGGGGAGACTACAACGCCATAAGGTGGATGCAGGCGAATATCAAAGGCTCGCCTGTAATTCTCGAAACCTCGGAAGATG
ACAGCAGCTACAGTTATGCCTGCCGCGTCTCTTCAAACACGGGGATTCCTGCGGTCATAGGATGGGCAAGGCATGAGAGG
TTCTGGGGAAGAGACCATGAAGAAGTGAAAAAGAGGATAGGAGACGTCAGCCTGATTTATTCAACGGGCAGTGAAGAGGA
AGCAATTGAGCTTATAGAAAAATATAACGTAACCTATGTATATATCGGAACTCTTGAAAGGCAGGTATATGACGTAAATA
CGAAAAAATTCGAAAATAAAGCCTATTTCGAACCTGTTTACGAGGGTTCAGCCACAATATATAAATTGAAAAAAAAACCG
TAA

Upstream 100 bases:

>100_bases
TGGGGCTTCAGAATAAAGCAGAAATAAGAACTGAATTTGCCAGTAAACTGAAGGTGGGCTTCAACTGAAAGGCTTCTTTT
TACATGCAGGGGAGGGGACA

Downstream 100 bases:

>100_bases
AAAAGATGTTATGAATTTCCACTTTTAGAAAAAAATACGGCTAAGATAAAAAACGAATTTTAGATAAATGTATCATTAAT
TTCAATATCTGAACATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Chlor_arch_yyy Domain; Glycosyl Transferase Family; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MSEYLHIIIWFFLIEALSFISVPFIRSAGNRLADGGYSVSRALGIMLVTYLSWIFSYILGFSFTAVLIAFFLLCSVSIFL
YRKQKFFPGRKVLVVNELVFASGFFFFLLVRTYLPEIYRHEKFMDFAFLNAVIRASSFPPQDPWFAGGLMDFYYYFGYLS
VAVFGKLSAVKPSILFNLAVALTFALSLNAFFGMGYNLTRGKIRYGILTAVFGMLLGNLQGLIEFVSVYIRHEQALGGYY
WSSSRVIPFTINEFPYFSFIHGDLHSHMLAIPFQLLVLAFLLNMHFRKNEDSIFENSLALLMFSMSLGFLFPFNSWDFPV
YFGLAFLVIFAFYCGDYVHNRNLFAAVAKFSNSMIFISIFSFLPYLLFYLDFNPQAAGGFDFVLPELRTETDRFLILFGL
FLFLVFSFLITRLDSRRKIVFFVLLAGVSALLSKAWSIPLLAVLLPVFVFSLLLFLKDIPERSASGFVYLLISAASFIAL
LCEVIFLDDPISGEFARMNTVFKFYMHLWIFLAISAAYSYYDLNSHYAARSGNRKTLKQFVKKGWSVILVILIICCAIFP
AVSTVTRIKEMNAEPSLDGMEYMRELDRGDYNAIRWMQANIKGSPVILETSEDDSSYSYACRVSSNTGIPAVIGWARHER
FWGRDHEEVKKRIGDVSLIYSTGSEEEAIELIEKYNVTYVYIGTLERQVYDVNTKKFENKAYFEPVYEGSATIYKLKKKP

Sequences:

>Translated_720_residues
MSEYLHIIIWFFLIEALSFISVPFIRSAGNRLADGGYSVSRALGIMLVTYLSWIFSYILGFSFTAVLIAFFLLCSVSIFL
YRKQKFFPGRKVLVVNELVFASGFFFFLLVRTYLPEIYRHEKFMDFAFLNAVIRASSFPPQDPWFAGGLMDFYYYFGYLS
VAVFGKLSAVKPSILFNLAVALTFALSLNAFFGMGYNLTRGKIRYGILTAVFGMLLGNLQGLIEFVSVYIRHEQALGGYY
WSSSRVIPFTINEFPYFSFIHGDLHSHMLAIPFQLLVLAFLLNMHFRKNEDSIFENSLALLMFSMSLGFLFPFNSWDFPV
YFGLAFLVIFAFYCGDYVHNRNLFAAVAKFSNSMIFISIFSFLPYLLFYLDFNPQAAGGFDFVLPELRTETDRFLILFGL
FLFLVFSFLITRLDSRRKIVFFVLLAGVSALLSKAWSIPLLAVLLPVFVFSLLLFLKDIPERSASGFVYLLISAASFIAL
LCEVIFLDDPISGEFARMNTVFKFYMHLWIFLAISAAYSYYDLNSHYAARSGNRKTLKQFVKKGWSVILVILIICCAIFP
AVSTVTRIKEMNAEPSLDGMEYMRELDRGDYNAIRWMQANIKGSPVILETSEDDSSYSYACRVSSNTGIPAVIGWARHER
FWGRDHEEVKKRIGDVSLIYSTGSEEEAIELIEKYNVTYVYIGTLERQVYDVNTKKFENKAYFEPVYEGSATIYKLKKKP
>Mature_719_residues
SEYLHIIIWFFLIEALSFISVPFIRSAGNRLADGGYSVSRALGIMLVTYLSWIFSYILGFSFTAVLIAFFLLCSVSIFLY
RKQKFFPGRKVLVVNELVFASGFFFFLLVRTYLPEIYRHEKFMDFAFLNAVIRASSFPPQDPWFAGGLMDFYYYFGYLSV
AVFGKLSAVKPSILFNLAVALTFALSLNAFFGMGYNLTRGKIRYGILTAVFGMLLGNLQGLIEFVSVYIRHEQALGGYYW
SSSRVIPFTINEFPYFSFIHGDLHSHMLAIPFQLLVLAFLLNMHFRKNEDSIFENSLALLMFSMSLGFLFPFNSWDFPVY
FGLAFLVIFAFYCGDYVHNRNLFAAVAKFSNSMIFISIFSFLPYLLFYLDFNPQAAGGFDFVLPELRTETDRFLILFGLF
LFLVFSFLITRLDSRRKIVFFVLLAGVSALLSKAWSIPLLAVLLPVFVFSLLLFLKDIPERSASGFVYLLISAASFIALL
CEVIFLDDPISGEFARMNTVFKFYMHLWIFLAISAAYSYYDLNSHYAARSGNRKTLKQFVKKGWSVILVILIICCAIFPA
VSTVTRIKEMNAEPSLDGMEYMRELDRGDYNAIRWMQANIKGSPVILETSEDDSSYSYACRVSSNTGIPAVIGWARHERF
WGRDHEEVKKRIGDVSLIYSTGSEEEAIELIEKYNVTYVYIGTLERQVYDVNTKKFENKAYFEPVYEGSATIYKLKKKP

Specific function: Unknown

COG id: COG5427

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82540; Mature: 82408

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYLHIIIWFFLIEALSFISVPFIRSAGNRLADGGYSVSRALGIMLVTYLSWIFSYILG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FSFTAVLIAFFLLCSVSIFLYRKQKFFPGRKVLVVNELVFASGFFFFLLVRTYLPEIYRH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EKFMDFAFLNAVIRASSFPPQDPWFAGGLMDFYYYFGYLSVAVFGKLSAVKPSILFNLAV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALTFALSLNAFFGMGYNLTRGKIRYGILTAVFGMLLGNLQGLIEFVSVYIRHEQALGGYY
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
WSSSRVIPFTINEFPYFSFIHGDLHSHMLAIPFQLLVLAFLLNMHFRKNEDSIFENSLAL
ECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LMFSMSLGFLFPFNSWDFPVYFGLAFLVIFAFYCGDYVHNRNLFAAVAKFSNSMIFISIF
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
SFLPYLLFYLDFNPQAAGGFDFVLPELRTETDRFLILFGLFLFLVFSFLITRLDSRRKIV
HHHHHHHHHHCCCCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FFVLLAGVSALLSKAWSIPLLAVLLPVFVFSLLLFLKDIPERSASGFVYLLISAASFIAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LCEVIFLDDPISGEFARMNTVFKFYMHLWIFLAISAAYSYYDLNSHYAARSGNRKTLKQF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCHHHHHHH
VKKGWSVILVILIICCAIFPAVSTVTRIKEMNAEPSLDGMEYMRELDRGDYNAIRWMQAN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHEEEEEEC
IKGSPVILETSEDDSSYSYACRVSSNTGIPAVIGWARHERFWGRDHEEVKKRIGDVSLIY
CCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCEEEEE
STGSEEEAIELIEKYNVTYVYIGTLERQVYDVNTKKFENKAYFEPVYEGSATIYKLKKKP
ECCCHHHHHHHHHHCCCEEEEEEEHHHHHEECCHHHHCCCCCCCHHHCCCCEEEEECCCC
>Mature Secondary Structure 
SEYLHIIIWFFLIEALSFISVPFIRSAGNRLADGGYSVSRALGIMLVTYLSWIFSYILG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FSFTAVLIAFFLLCSVSIFLYRKQKFFPGRKVLVVNELVFASGFFFFLLVRTYLPEIYRH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EKFMDFAFLNAVIRASSFPPQDPWFAGGLMDFYYYFGYLSVAVFGKLSAVKPSILFNLAV
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALTFALSLNAFFGMGYNLTRGKIRYGILTAVFGMLLGNLQGLIEFVSVYIRHEQALGGYY
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
WSSSRVIPFTINEFPYFSFIHGDLHSHMLAIPFQLLVLAFLLNMHFRKNEDSIFENSLAL
ECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LMFSMSLGFLFPFNSWDFPVYFGLAFLVIFAFYCGDYVHNRNLFAAVAKFSNSMIFISIF
HHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
SFLPYLLFYLDFNPQAAGGFDFVLPELRTETDRFLILFGLFLFLVFSFLITRLDSRRKIV
HHHHHHHHHHCCCCCCCCCCHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FFVLLAGVSALLSKAWSIPLLAVLLPVFVFSLLLFLKDIPERSASGFVYLLISAASFIAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LCEVIFLDDPISGEFARMNTVFKFYMHLWIFLAISAAYSYYDLNSHYAARSGNRKTLKQF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCHHHHHHH
VKKGWSVILVILIICCAIFPAVSTVTRIKEMNAEPSLDGMEYMRELDRGDYNAIRWMQAN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHEEEEEEC
IKGSPVILETSEDDSSYSYACRVSSNTGIPAVIGWARHERFWGRDHEEVKKRIGDVSLIY
CCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCEEEEE
STGSEEEAIELIEKYNVTYVYIGTLERQVYDVNTKKFENKAYFEPVYEGSATIYKLKKKP
ECCCHHHHHHHHHHCCCEEEEEEEHHHHHEECCHHHHCCCCCCCHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA