| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226917
Identifier: 21226917
GI number: 21226917
Start: 965530
End: 965838
Strand: Direct
Name: 21226917
Synonym: MM_0815
Alternate gene names: NA
Gene position: 965530-965838 (Clockwise)
Preceding gene: 21226916
Following gene: 21226918
Centisome position: 23.57
GC content: 40.45
Gene sequence:
>309_bases ATGCTTACACGTGAAGAGATTCTTATCATTTATGACGCTGGTCCTGAAGCTGTAATTTCTGTAATCCAGAGGCTTGAGAC TATCATAGAAGAACAATCTATTCGTATTGCTGAACTCGAAGAACGTGTAAAGGTATTAGAATCTCGTTTAAACCAAAACA GTCGTAACAGCAGTCGCCCTCCTTCTACTGATTTTTTTATCAAGGAGAAACCTAACCCCAAGAGTCTCCGTAAAAAGAGT GGCAAAAAACCTGGAGGTCAAGATGGTCATCCAGGAACAACTCTTGAAATGGTTGATCATCCTGAGTAG
Upstream 100 bases:
>100_bases ATTATTGTAACTATTCAGGTAGAGCCTTTGAAAGGCTACAATTTTTCCTCTTTTCGAGGAAAAATTGCATATAAATTGAA TCCTATTTCCTTTCGTTATT
Downstream 100 bases:
>100_bases GTAATAGAACATTCTTTGAGTTGCTGCAAAGAATGTGGCCATACTCTTGAGAATGTTGAAGTTGAAGCCTATGAGAAAAG ACAGGTCTTTGATATTCCTC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MLTREEILIIYDAGPEAVISVIQRLETIIEEQSIRIAELEERVKVLESRLNQNSRNSSRPPSTDFFIKEKPNPKSLRKKS GKKPGGQDGHPGTTLEMVDHPE
Sequences:
>Translated_102_residues MLTREEILIIYDAGPEAVISVIQRLETIIEEQSIRIAELEERVKVLESRLNQNSRNSSRPPSTDFFIKEKPNPKSLRKKS GKKPGGQDGHPGTTLEMVDHPE >Mature_102_residues MLTREEILIIYDAGPEAVISVIQRLETIIEEQSIRIAELEERVKVLESRLNQNSRNSSRPPSTDFFIKEKPNPKSLRKKS GKKPGGQDGHPGTTLEMVDHPE
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11549; Mature: 11549
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTREEILIIYDAGPEAVISVIQRLETIIEEQSIRIAELEERVKVLESRLNQNSRNSSRP CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC PSTDFFIKEKPNPKSLRKKSGKKPGGQDGHPGTTLEMVDHPE CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure MLTREEILIIYDAGPEAVISVIQRLETIIEEQSIRIAELEERVKVLESRLNQNSRNSSRP CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC PSTDFFIKEKPNPKSLRKKSGKKPGGQDGHPGTTLEMVDHPE CCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA