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The map label for this gene is rps19e [H]

Identifier: 21226904

GI number: 21226904

Start: 956480

End: 956929

Strand: Direct

Name: rps19e [H]

Synonym: MM_0802

Alternate gene names: 21226904

Gene position: 956480-956929 (Clockwise)

Preceding gene: 21226903

Following gene: 21226905

Centisome position: 23.35

GC content: 50.0

Gene sequence:

>450_bases
ATGACAACAGTGTTTGACGTCCCTGCAGCAGAAATGATCGACAAGCTTGCAGGTATTCTTAAGGAAAATGAAAATGTCGT
TCCCCCCCAGTGGGCAGGGAACGTGAAGACCGGAGTTCACAAAGACCTTCCGCCGACCAACGATGACTGGTGGTACGTAA
GGTGCGCAGCAGTCCTCAGAAAGATCTACACCGATGGACCAATCGGAATCGAGAGGCTCAGATCAGTCTACGGAGGAAAG
AAGGACAACGGCTCCCAGCCTTACCACAAGGCAAAGGGTAGCGGTTCTATTGCAAGGAAGTCAGTCCAGCAGCTTGAGGC
TGCAGGTTTCCTGCAGAAAGTAAAGGACGGAAGAACAGTATCTGCAAAAGGACGTTCCATGATGGATAACGCAGCACACG
AACTTAAACAGGAGCTGCTTGAGAAAATCCCGGAACTTGCAAAATACTGA

Upstream 100 bases:

>100_bases
CTCTATCCGAGAACAAGAGTTACATTCCTGACAGATTCGGGGGGAAGAATCGGCGCTATCGCCCGAACCTGCAAAAAATT
AATTCGCATGAGGAGGATAC

Downstream 100 bases:

>100_bases
GATGAAAAATCCTTCAGAAAGGGACCTTAAAATCCGGACCCCCTTTCGATATACCATAACCATATTCCAGAAAACCGGTT
TTTTCGGTGATTGCCATGTC

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTTVFDVPAAEMIDKLAGILKENENVVPPQWAGNVKTGVHKDLPPTNDDWWYVRCAAVLRKIYTDGPIGIERLRSVYGGK
KDNGSQPYHKAKGSGSIARKSVQQLEAAGFLQKVKDGRTVSAKGRSMMDNAAHELKQELLEKIPELAKY

Sequences:

>Translated_149_residues
MTTVFDVPAAEMIDKLAGILKENENVVPPQWAGNVKTGVHKDLPPTNDDWWYVRCAAVLRKIYTDGPIGIERLRSVYGGK
KDNGSQPYHKAKGSGSIARKSVQQLEAAGFLQKVKDGRTVSAKGRSMMDNAAHELKQELLEKIPELAKY
>Mature_148_residues
TTVFDVPAAEMIDKLAGILKENENVVPPQWAGNVKTGVHKDLPPTNDDWWYVRCAAVLRKIYTDGPIGIERLRSVYGGKK
DNGSQPYHKAKGSGSIARKSVQQLEAAGFLQKVKDGRTVSAKGRSMMDNAAHELKQELLEKIPELAKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=135, Percent_Identity=34.8148148148148, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17508697, Length=137, Percent_Identity=38.6861313868613, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6324451, Length=139, Percent_Identity=34.5323741007194, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324027, Length=139, Percent_Identity=34.5323741007194, Blast_Score=83, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24649452, Length=134, Percent_Identity=33.5820895522388, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17647891, Length=135, Percent_Identity=35.5555555555556, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642576, Length=135, Percent_Identity=35.5555555555556, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642574, Length=135, Percent_Identity=35.5555555555556, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 16478; Mature: 16347

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFDVPAAEMIDKLAGILKENENVVPPQWAGNVKTGVHKDLPPTNDDWWYVRCAAVLR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KIYTDGPIGIERLRSVYGGKKDNGSQPYHKAKGSGSIARKSVQQLEAAGFLQKVKDGRTV
HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
SAKGRSMMDNAAHELKQELLEKIPELAKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVFDVPAAEMIDKLAGILKENENVVPPQWAGNVKTGVHKDLPPTNDDWWYVRCAAVLR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KIYTDGPIGIERLRSVYGGKKDNGSQPYHKAKGSGSIARKSVQQLEAAGFLQKVKDGRTV
HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
SAKGRSMMDNAAHELKQELLEKIPELAKY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]