| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226852
Identifier: 21226852
GI number: 21226852
Start: 899690
End: 901618
Strand: Direct
Name: 21226852
Synonym: MM_0750
Alternate gene names: NA
Gene position: 899690-901618 (Clockwise)
Preceding gene: 21226849
Following gene: 21226853
Centisome position: 21.96
GC content: 47.74
Gene sequence:
>1929_bases ATGCACTATAGCCTTGGAATCGATGCCGGGGGCACTTATACAGACGCAGTACTTGTGAGGGATTCTGATGGGAAAATTGC AGACTCAAATAAAGCACTGACTACCTATCCCGACCCACTTGCCGGCATCAAAAAGGTAATTGATGGGCTTAATCCGGAGT ATCTCAAAAACATAAAACTCGTATCCGTATCAACCACCCTTTCCACCAATACCATACTTGAAGGGAACGGTTTTCCTGTA GCTCTTATTCTCATCGGGGACCACCCTCTTGAAAAGGAATTCCCGACAGGGCATGTGCTTTTTGCAGGAGGAGGGCATAA CCATAATGGAGAAGAAATATCCCCTCTTGACCTGAAAGCCATTGAAAAATTTGCCCTGAGCGTAAAGGACAAAGTATCTG CTTTTGCTATTTCTTCCTATTTCAGTACACGCAACCCTGAACATGAGCTTAAAGCAAGAGACTGCATAATGAAACTTACA GGACTTCCTGCGGTCTGCGGGCACGAACTCTCCCAGGAACTGGGAGCCTATGAGAGGTCAGTAACAGCTTTCCTCAATGC CCAGCTGATCCCCATAACCAGGCAGTTTGTGAAGTCCATTATTGCAGACATGACAGAAAGGGGGATTAATGCAAGGCTTC TTATGCTCAAATGCGACGGTTCGGTTATAGGGATAAAAGACGCCCTGCAAAGACCAATAGAAACAATCTTTTCAGGCCCT GCAGCAAGCCTTGTGGGAGCTTCTTACCTTTCAGGGCTGCAAACCTGCGCAGTTGTTGACGTAGGTGGGACGAGCACTGA TATTTCTTCAATTTATATGGGAGTCCCTGACCTGAGTGACGACGGAGCCATTGTCGGCGGCTGGAAGACAAGAGTCAGAG CTATAAGAATGGAGACAACAGCTACAGGAGGAGACAGCCATGTCTGGACAGTGGACAGGGGGCTCCACCTTGGACCACGG AGAGTTATGCCTCTTGCAGTAGCTGCAGCTCAGTATCAGGATTTTCTGAATACGCTCAAAAGGACTCCCATACCTGCCAG AGAAGACCTGGGAGAAAATATTCAGCCTACAAAATTTTTTGTCAGGTCAGGCTATACAGCAGGTGAGATTAGCAAGGTTG AATCTGAAGTCCTCGGCGTAATAGGAGACGAGCCTGTTTCCGTGAATGACATAAAAACCCTTATCAGAAAAGACCTCCAC CCCCAAACCCTGGACTCCCTCATTAAAAAGAGGCTTATCCAGGCTATAGGCTTTACACCAACAGATGCTCTTCACGTGCT CGGGGAATATACAGCCTGGAACGAAGAAGCTTCCAGAATAGGCGCAGAAAGGCTTGCAAGGCTCATGCGCATGACACCAC ACGAGTTCTGCACCTCAGTAAAAAAGAAGGTTGCAAGGAATATGTCGCTCCATCTCCTCTCATATATCCTGCAGGGAGTC CCGCATACGGCTATTGAGCAAATTCTGGACGGGAATTACCAGGCAAAGTTCAAGCTTGGAGTCCCTGTTGTCCTGCTCGG AGGACCCGTGCGCTCACACAGGAAAGAACTGGAGGAATTTATAGACGCCGAAATTATTGTTCCCGAACATGCCGAGGTAG GAAATGCTGCAGGGGCTCTTGCAGGAAAAGGCATCAAAAGAGTGGAGATCCTTATAAGGCCTGCAAGCCTGATGTCTCCT GAGAAGGATTTCCTTGTTTTTGCACCCGGCAGCAGGCAGAGGTTCGATGTATACACAGAAGCGTTGAATGTTGCAACAGA ACTTGGAAAAAAGCTCGTTGAAGATTATATGAAAGAATGTGGGCTCAGTGGAGACCAGGTTGAAATTTCCATTGAGAAAA AGACCATCTCACCTGAAGGCTGGAACCATCCTCCAATGGAAACAAATCTGCTTGTAATGGGAATTGGAATGCGCAGACTC CACGGCTGA
Upstream 100 bases:
>100_bases AGTTAATTTTATTGTAAAAAGCTACTGCAATTCCATACTCGATTGCAGTAAACAAAAAACAGCCAAAAACAAAAACAATA AAAAAGGAGCCATTTTTAAT
Downstream 100 bases:
>100_bases AAGCTCGGAATGAAAAGAAAAATTAGAATCCAGAGGAAGTAAAAACCGAAAGGGGAAATAATGAGACTGTTACTGATCGC TGATATACATGGAAATTATG
Product: dihydropyrimidinase
Products: 3-ureidopropanoate
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MHYSLGIDAGGTYTDAVLVRDSDGKIADSNKALTTYPDPLAGIKKVIDGLNPEYLKNIKLVSVSTTLSTNTILEGNGFPV ALILIGDHPLEKEFPTGHVLFAGGGHNHNGEEISPLDLKAIEKFALSVKDKVSAFAISSYFSTRNPEHELKARDCIMKLT GLPAVCGHELSQELGAYERSVTAFLNAQLIPITRQFVKSIIADMTERGINARLLMLKCDGSVIGIKDALQRPIETIFSGP AASLVGASYLSGLQTCAVVDVGGTSTDISSIYMGVPDLSDDGAIVGGWKTRVRAIRMETTATGGDSHVWTVDRGLHLGPR RVMPLAVAAAQYQDFLNTLKRTPIPAREDLGENIQPTKFFVRSGYTAGEISKVESEVLGVIGDEPVSVNDIKTLIRKDLH PQTLDSLIKKRLIQAIGFTPTDALHVLGEYTAWNEEASRIGAERLARLMRMTPHEFCTSVKKKVARNMSLHLLSYILQGV PHTAIEQILDGNYQAKFKLGVPVVLLGGPVRSHRKELEEFIDAEIIVPEHAEVGNAAGALAGKGIKRVEILIRPASLMSP EKDFLVFAPGSRQRFDVYTEALNVATELGKKLVEDYMKECGLSGDQVEISIEKKTISPEGWNHPPMETNLLVMGIGMRRL HG
Sequences:
>Translated_642_residues MHYSLGIDAGGTYTDAVLVRDSDGKIADSNKALTTYPDPLAGIKKVIDGLNPEYLKNIKLVSVSTTLSTNTILEGNGFPV ALILIGDHPLEKEFPTGHVLFAGGGHNHNGEEISPLDLKAIEKFALSVKDKVSAFAISSYFSTRNPEHELKARDCIMKLT GLPAVCGHELSQELGAYERSVTAFLNAQLIPITRQFVKSIIADMTERGINARLLMLKCDGSVIGIKDALQRPIETIFSGP AASLVGASYLSGLQTCAVVDVGGTSTDISSIYMGVPDLSDDGAIVGGWKTRVRAIRMETTATGGDSHVWTVDRGLHLGPR RVMPLAVAAAQYQDFLNTLKRTPIPAREDLGENIQPTKFFVRSGYTAGEISKVESEVLGVIGDEPVSVNDIKTLIRKDLH PQTLDSLIKKRLIQAIGFTPTDALHVLGEYTAWNEEASRIGAERLARLMRMTPHEFCTSVKKKVARNMSLHLLSYILQGV PHTAIEQILDGNYQAKFKLGVPVVLLGGPVRSHRKELEEFIDAEIIVPEHAEVGNAAGALAGKGIKRVEILIRPASLMSP EKDFLVFAPGSRQRFDVYTEALNVATELGKKLVEDYMKECGLSGDQVEISIEKKTISPEGWNHPPMETNLLVMGIGMRRL HG >Mature_642_residues MHYSLGIDAGGTYTDAVLVRDSDGKIADSNKALTTYPDPLAGIKKVIDGLNPEYLKNIKLVSVSTTLSTNTILEGNGFPV ALILIGDHPLEKEFPTGHVLFAGGGHNHNGEEISPLDLKAIEKFALSVKDKVSAFAISSYFSTRNPEHELKARDCIMKLT GLPAVCGHELSQELGAYERSVTAFLNAQLIPITRQFVKSIIADMTERGINARLLMLKCDGSVIGIKDALQRPIETIFSGP AASLVGASYLSGLQTCAVVDVGGTSTDISSIYMGVPDLSDDGAIVGGWKTRVRAIRMETTATGGDSHVWTVDRGLHLGPR RVMPLAVAAAQYQDFLNTLKRTPIPAREDLGENIQPTKFFVRSGYTAGEISKVESEVLGVIGDEPVSVNDIKTLIRKDLH PQTLDSLIKKRLIQAIGFTPTDALHVLGEYTAWNEEASRIGAERLARLMRMTPHEFCTSVKKKVARNMSLHLLSYILQGV PHTAIEQILDGNYQAKFKLGVPVVLLGGPVRSHRKELEEFIDAEIIVPEHAEVGNAAGALAGKGIKRVEILIRPASLMSP EKDFLVFAPGSRQRFDVYTEALNVATELGKKLVEDYMKECGLSGDQVEISIEKKTISPEGWNHPPMETNLLVMGIGMRRL HG
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.2
Molecular weight: Translated: 69828; Mature: 69828
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYSLGIDAGGTYTDAVLVRDSDGKIADSNKALTTYPDPLAGIKKVIDGLNPEYLKNIKL CCEEEECCCCCCEEEEEEEECCCCCEECCCCCEEECCCHHHHHHHHHCCCCHHHHCCEEE VSVSTTLSTNTILEGNGFPVALILIGDHPLEKEFPTGHVLFAGGGHNHNGEEISPLDLKA EEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH IEKFALSVKDKVSAFAISSYFSTRNPEHELKARDCIMKLTGLPAVCGHELSQELGAYERS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VTAFLNAQLIPITRQFVKSIIADMTERGINARLLMLKCDGSVIGIKDALQRPIETIFSGP HHHHHCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEECHHHHHHHHHHHHHCCC AASLVGASYLSGLQTCAVVDVGGTSTDISSIYMGVPDLSDDGAIVGGWKTRVRAIRMETT HHHHHHHHHHHHHCEEEEEECCCCCCCHHHHEECCCCCCCCCCEECCHHHEEEEEEEEEE ATGGDSHVWTVDRGLHLGPRRVMPLAVAAAQYQDFLNTLKRTPIPAREDLGENIQPTKFF CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHH VRSGYTAGEISKVESEVLGVIGDEPVSVNDIKTLIRKDLHPQTLDSLIKKRLIQAIGFTP HHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC TDALHVLGEYTAWNEEASRIGAERLARLMRMTPHEFCTSVKKKVARNMSLHLLSYILQGV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCC PHTAIEQILDGNYQAKFKLGVPVVLLGGPVRSHRKELEEFIDAEIIVPEHAEVGNAAGAL CHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHH AGKGIKRVEILIRPASLMSPEKDFLVFAPGSRQRFDVYTEALNVATELGKKLVEDYMKEC HCCCCEEEEEEEECHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGDQVEISIEKKTISPEGWNHPPMETNLLVMGIGMRRLHG CCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHCC >Mature Secondary Structure MHYSLGIDAGGTYTDAVLVRDSDGKIADSNKALTTYPDPLAGIKKVIDGLNPEYLKNIKL CCEEEECCCCCCEEEEEEEECCCCCEECCCCCEEECCCHHHHHHHHHCCCCHHHHCCEEE VSVSTTLSTNTILEGNGFPVALILIGDHPLEKEFPTGHVLFAGGGHNHNGEEISPLDLKA EEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH IEKFALSVKDKVSAFAISSYFSTRNPEHELKARDCIMKLTGLPAVCGHELSQELGAYERS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VTAFLNAQLIPITRQFVKSIIADMTERGINARLLMLKCDGSVIGIKDALQRPIETIFSGP HHHHHCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEECHHHHHHHHHHHHHCCC AASLVGASYLSGLQTCAVVDVGGTSTDISSIYMGVPDLSDDGAIVGGWKTRVRAIRMETT HHHHHHHHHHHHHCEEEEEECCCCCCCHHHHEECCCCCCCCCCEECCHHHEEEEEEEEEE ATGGDSHVWTVDRGLHLGPRRVMPLAVAAAQYQDFLNTLKRTPIPAREDLGENIQPTKFF CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHH VRSGYTAGEISKVESEVLGVIGDEPVSVNDIKTLIRKDLHPQTLDSLIKKRLIQAIGFTP HHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC TDALHVLGEYTAWNEEASRIGAERLARLMRMTPHEFCTSVKKKVARNMSLHLLSYILQGV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHCC PHTAIEQILDGNYQAKFKLGVPVVLLGGPVRSHRKELEEFIDAEIIVPEHAEVGNAAGAL CHHHHHHHHCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHH AGKGIKRVEILIRPASLMSPEKDFLVFAPGSRQRFDVYTEALNVATELGKKLVEDYMKEC HCCCCEEEEEEEECHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGDQVEISIEKKTISPEGWNHPPMETNLLVMGIGMRRLHG CCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5,6-dihydrouracil; H2O
Specific reaction: 5,6-dihydrouracil + H2O = 3-ureidopropanoate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]