Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226201

Identifier: 21226201

GI number: 21226201

Start: 127683

End: 128300

Strand: Reverse

Name: 21226201

Synonym: MM_0099

Alternate gene names: NA

Gene position: 128300-127683 (Counterclockwise)

Preceding gene: 21226202

Following gene: 21226199

Centisome position: 3.13

GC content: 49.51

Gene sequence:

>618_bases
GTGGAAACCCTTTGCAGTTATGGCTGCGTGCTTTACAGGCTCAGCCAGCTGGATAAAGCCGAAGAAGTATATAGAAGAGC
CCTTCTTCTTGACCCCGATCATGTCGAATCGCACTGCGGGTATGGAATTTTGCTCAACAGGCGCGGACAGAAAACCGAAG
CAGGCCTCCATTATGCACGTGCTCTTGAAATCGACCCGGAGCACGTTGAATCAAATTTCCGCTATGCACGTCTGCTTGAG
GAAAAAGGGGAGCCAATTGAGGCCGAAACTTATTACATAGTAGCTCTCAAAGCAGACCCCGAAAGCTCTAAACTCCACCT
TTATTATGCCCGCCTGCTTGCACAACACGGACTCATCCATGGGGCAAGAGTGCACTTCAGGTATGCGCTTAAAATTAGCC
CTGAAGACGTTGAAGCTCACTGCGAATATGCAAGGCTGCTTGCCAGGTTCGGGCACAGGCATGAAGCTGAAGTTCAGTAC
AAAAAAGCCCTTGAACTCAACCCCGGGCATTTTGGGAGCCTTTCCGGTTATGGAGATCTGCTTAAAGAAAAGGGGCAGTA
CACCGAAGCTGAAAAAATTTACAGGCAGGCAGAATGTTTCAGACAGGACGCCTGGTAA

Upstream 100 bases:

>100_bases
AGAAGCCCTCTGCGGATATGGATCTATGCTTGCCGGGGCAGGGTAGCTGGACGGAGCACGGATTCAGTATGAAAAAGCTC
TTGAGTTCAATCCTGACCAT

Downstream 100 bases:

>100_bases
TAAATTAATAATCCCTGTCCGCTCAGGCTGGCAAAGCCAGGATTCAGTAAAGCCGTAGAGGCTCAATTCCTTTTTTTTCC
ATAAGGCAGGCAGGGATATC

Product: O-linked N-acetylglucosamine transferase

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked N-Acetylglucosamine Transferase; O-GlcNAc Transferase; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; TPR Domain-Containing Protein; Sulfotransferase; SEC-C Motif Domain Protein; Tetratricopeptide Repeat Family; Methyltransferase Type; SPY Protein; Peptidase S1 And S6 Chymotrypsin/Hap; FkbM Family Methyltransferase; Glycosyl Transferase Family Protein; Peptidase; Porphyrin Biosynthesis Protein; Flp Pilus Assembly Protein TadD; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Zn-Dependent Protease

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE
EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY
KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW

Sequences:

>Translated_205_residues
METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE
EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY
KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW
>Mature_205_residues
METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE
EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY
KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=198, Percent_Identity=29.7979797979798, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI32307150, Length=198, Percent_Identity=29.7979797979798, Blast_Score=88, Evalue=4e-18,
Organism=Homo sapiens, GI83415184, Length=184, Percent_Identity=33.695652173913, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI301336134, Length=184, Percent_Identity=33.695652173913, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI22749211, Length=156, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=196, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI115532692, Length=196, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=9e-21,
Organism=Drosophila melanogaster, GI17647755, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24585827, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24585829, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19920486, Length=174, Percent_Identity=32.183908045977, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161076610, Length=174, Percent_Identity=32.183908045977, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23714; Mature: 23714

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYAR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHH
ALEIDPEHVESNFRYARLLEEKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIH
EECCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC
GARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNPGHFGSLSGYGDL
CEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCHHHH
LKEKGQYTEAEKIYRQAECFRQDAW
HHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYAR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHH
ALEIDPEHVESNFRYARLLEEKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIH
EECCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC
GARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNPGHFGSLSGYGDL
CEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCHHHH
LKEKGQYTEAEKIYRQAECFRQDAW
HHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA