Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is fwdF [H]

Identifier: 21226157

GI number: 21226157

Start: 72307

End: 73809

Strand: Reverse

Name: fwdF [H]

Synonym: MM_0055

Alternate gene names: 21226157

Gene position: 73809-72307 (Counterclockwise)

Preceding gene: 21226158

Following gene: 21226155

Centisome position: 1.8

GC content: 50.37

Gene sequence:

>1503_bases
ATGAGCGAGAAACTTCCGGAACATCCCGGAGAATGTCCCGAAAAATGCCCGGACCAGGAAATTCACGTATGTAACGGGTG
CTGTGGTACCGGAGAAGGAGAAGAGCCTGAAATAGGAGAAAACGAGGTTTCGGGTCCGGATTCTGAAGATTTAGAATTTG
AAGAGCCTGAAGCTGCAGTTTCCGGGGACAGCGAGGGTGAGGAACAGGAAAAGATCACGGTCACAACCAGTATGGACATT
CAGGGAACTCATTTCATTTACACTCAGGCTACTGAGAAGTCCCTCAAAATCCTCGATTACGATTACAAGCGTTGCAATGG
CTGCGGTATCTGTGCGGAAATCTGCCCTACAAAAGCCCTTGAAATGGGGCCGCTGCATGAGATCGCAACCGGGCTTGATG
CCCCTGCCGTGATGATGGACCTTGAGAAATGTACATTCTGCAGGATGTGCTCAAACCTCTGCCCTGTGCATGCCATTTCT
TTTGAAGCGGTCGGAGAGGTCCCTGATGAAAAACAGTACCCTAAATACGATACCTTTGTAAATATCAATGAAAAATGCCT
GCCCTGCCTCCTCTGTGAAGGAGCCTGCCCGCAGGACGCAATAGAAGTGGAATTCACTTTTCCGAAAAAGGAAGAGATCG
CTCCATTTAAAGAAGGTGTGGAAGGTGAGATTGAAATTGATCTCGAAAAATGCAACTTCTGCGGGATCTGTGCTAAATTC
TGCGACGCGGTTATCCTGCTTGAGCGCGAACCCACTCCTGACAACCCTGTACCTTTTGAGCAGATCCTTGTTGATACGGA
CAGATGTGACTACTGTGTGCTCTGCCAGGATATCTGCCCTGAAGAAGCAATAAAGGTTAAAGGGGAACGCCCCTGTGAAG
CCCCAGAGGTTGGAGGAAAAGTAAAAGTAGACGACCTGAAATGTACCCAGTGTGCCCGGTGCCAGGCTGTCTGTCCTTAT
GAAGCTGTTGACCTCCAGAAGCCCATGGAAGGGAAACTGAGCCTTATCGAGGTTAATTTGAAGGAATGCGATCCCCAGGG
CTGCCGCGGCTGCTTTAATGTCTGCCCCTCGGATCTCTGGTACGTGCCGACAGACCCTGAAGATCCGCGCAAGATAGCTT
TTGCCGAGGAGTACTGCATGTACTGCGGAGCCTGTGTGAAAGCCTGCCACCTTGATGCCATAAAGGTGGAAAGAACTGAT
GTCCACCACACCGAAATTCCTGATACTCCCTGGGCAACCCAGTGGAGGGATGCGATCGAGTCCCTGAAAACCGGCTCAAG
AAAAGGAGTTGACCGCGCAGTCTTCAGGGAAACGGAAACCCTCAAAGCCCAGAAGTTTATGGGTATAGAGCCTCCGTGTA
CTGATGAAGAGGCGCTTGCAGCCGTGCAGGCAAAAATCGATTCTCTCATTCCTGTACTCAAAAGCGCAAAAGTCAGGAAG
CTCTGGGAAACCGACTCCCCGGAAAATACTGCTGCAGCAGTTAAAAAGAAGATTGAGGGCTGA

Upstream 100 bases:

>100_bases
ACACGATTACCGAGTTTGTAAAGGAACTTGAAGAAATAGGGCCCATAGGGAGTGAACTCAAACGGGAATACACCGCAACC
GGACTCGAGGAGGTGGCTAA

Downstream 100 bases:

>100_bases
AAATCTGACGAAATCTGTAAGGTTCCGGATTTACTATCCTTTTCTAAATTTATTACATTTTTCTAAAAAATCTGCGACCG
GGCTGAGAAGGCTGAAAAAA

Product: tungsten formylmethanofuran dehydrogenase subunit F

Products: CO2; methanofuran; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDI
QGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAIS
FEAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF
CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPY
EAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTD
VHHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK
LWETDSPENTAAAVKKKIEG

Sequences:

>Translated_500_residues
MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDI
QGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAIS
FEAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF
CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPY
EAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTD
VHHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK
LWETDSPENTAAAVKKKIEG
>Mature_499_residues
SEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDIQ
GTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISF
EAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKFC
DAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPYE
AVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDV
HHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRKL
WETDSPENTAAAVKKKIEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR016459 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.99.5

Molecular weight: Translated: 55347; Mature: 55216

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAV
CCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
SGDSEGEEQEKITVTTSMDIQGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKAL
CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCHHHCCCCCCHHHHCCCHHC
EMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISFEAVGEVPDEKQYPKYDTFV
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCEE
NINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF
CCCHHCCHHHEECCCCCCCCEEEEEECCCCHHCCHHHCCCCCEEEEEHHHCCHHHHHHHH
CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGK
HCEEEEEECCCCCCCCCCHHHHEEECCCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCCCE
VKVDDLKCTQCARCQAVCPYEAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLW
EEECCCCCCHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCE
YVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDVHHTEIPDTPWATQWRDAIE
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
SLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LWETDSPENTAAAVKKKIEG
HHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAV
CCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
SGDSEGEEQEKITVTTSMDIQGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKAL
CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCHHHCCCCCCHHHHCCCHHC
EMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISFEAVGEVPDEKQYPKYDTFV
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCEE
NINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF
CCCHHCCHHHEECCCCCCCCEEEEEECCCCHHCCHHHCCCCCEEEEEHHHCCHHHHHHHH
CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGK
HCEEEEEECCCCCCCCCCHHHHEEECCCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCCCE
VKVDDLKCTQCARCQAVCPYEAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLW
EEECCCCCCHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCE
YVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDVHHTEIPDTPWATQWRDAIE
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
SLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LWETDSPENTAAAVKKKIEG
HHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formylmethanofuran; H2O; acceptor

Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]