| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is fwdF [H]
Identifier: 21226157
GI number: 21226157
Start: 72307
End: 73809
Strand: Reverse
Name: fwdF [H]
Synonym: MM_0055
Alternate gene names: 21226157
Gene position: 73809-72307 (Counterclockwise)
Preceding gene: 21226158
Following gene: 21226155
Centisome position: 1.8
GC content: 50.37
Gene sequence:
>1503_bases ATGAGCGAGAAACTTCCGGAACATCCCGGAGAATGTCCCGAAAAATGCCCGGACCAGGAAATTCACGTATGTAACGGGTG CTGTGGTACCGGAGAAGGAGAAGAGCCTGAAATAGGAGAAAACGAGGTTTCGGGTCCGGATTCTGAAGATTTAGAATTTG AAGAGCCTGAAGCTGCAGTTTCCGGGGACAGCGAGGGTGAGGAACAGGAAAAGATCACGGTCACAACCAGTATGGACATT CAGGGAACTCATTTCATTTACACTCAGGCTACTGAGAAGTCCCTCAAAATCCTCGATTACGATTACAAGCGTTGCAATGG CTGCGGTATCTGTGCGGAAATCTGCCCTACAAAAGCCCTTGAAATGGGGCCGCTGCATGAGATCGCAACCGGGCTTGATG CCCCTGCCGTGATGATGGACCTTGAGAAATGTACATTCTGCAGGATGTGCTCAAACCTCTGCCCTGTGCATGCCATTTCT TTTGAAGCGGTCGGAGAGGTCCCTGATGAAAAACAGTACCCTAAATACGATACCTTTGTAAATATCAATGAAAAATGCCT GCCCTGCCTCCTCTGTGAAGGAGCCTGCCCGCAGGACGCAATAGAAGTGGAATTCACTTTTCCGAAAAAGGAAGAGATCG CTCCATTTAAAGAAGGTGTGGAAGGTGAGATTGAAATTGATCTCGAAAAATGCAACTTCTGCGGGATCTGTGCTAAATTC TGCGACGCGGTTATCCTGCTTGAGCGCGAACCCACTCCTGACAACCCTGTACCTTTTGAGCAGATCCTTGTTGATACGGA CAGATGTGACTACTGTGTGCTCTGCCAGGATATCTGCCCTGAAGAAGCAATAAAGGTTAAAGGGGAACGCCCCTGTGAAG CCCCAGAGGTTGGAGGAAAAGTAAAAGTAGACGACCTGAAATGTACCCAGTGTGCCCGGTGCCAGGCTGTCTGTCCTTAT GAAGCTGTTGACCTCCAGAAGCCCATGGAAGGGAAACTGAGCCTTATCGAGGTTAATTTGAAGGAATGCGATCCCCAGGG CTGCCGCGGCTGCTTTAATGTCTGCCCCTCGGATCTCTGGTACGTGCCGACAGACCCTGAAGATCCGCGCAAGATAGCTT TTGCCGAGGAGTACTGCATGTACTGCGGAGCCTGTGTGAAAGCCTGCCACCTTGATGCCATAAAGGTGGAAAGAACTGAT GTCCACCACACCGAAATTCCTGATACTCCCTGGGCAACCCAGTGGAGGGATGCGATCGAGTCCCTGAAAACCGGCTCAAG AAAAGGAGTTGACCGCGCAGTCTTCAGGGAAACGGAAACCCTCAAAGCCCAGAAGTTTATGGGTATAGAGCCTCCGTGTA CTGATGAAGAGGCGCTTGCAGCCGTGCAGGCAAAAATCGATTCTCTCATTCCTGTACTCAAAAGCGCAAAAGTCAGGAAG CTCTGGGAAACCGACTCCCCGGAAAATACTGCTGCAGCAGTTAAAAAGAAGATTGAGGGCTGA
Upstream 100 bases:
>100_bases ACACGATTACCGAGTTTGTAAAGGAACTTGAAGAAATAGGGCCCATAGGGAGTGAACTCAAACGGGAATACACCGCAACC GGACTCGAGGAGGTGGCTAA
Downstream 100 bases:
>100_bases AAATCTGACGAAATCTGTAAGGTTCCGGATTTACTATCCTTTTCTAAATTTATTACATTTTTCTAAAAAATCTGCGACCG GGCTGAGAAGGCTGAAAAAA
Product: tungsten formylmethanofuran dehydrogenase subunit F
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDI QGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAIS FEAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPY EAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTD VHHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK LWETDSPENTAAAVKKKIEG
Sequences:
>Translated_500_residues MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDI QGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAIS FEAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPY EAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTD VHHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK LWETDSPENTAAAVKKKIEG >Mature_499_residues SEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAVSGDSEGEEQEKITVTTSMDIQ GTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKALEMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISF EAVGEVPDEKQYPKYDTFVNINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKFC DAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGKVKVDDLKCTQCARCQAVCPYE AVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLWYVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDV HHTEIPDTPWATQWRDAIESLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRKL WETDSPENTAAAVKKKIEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR016459 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: 1.2.99.5
Molecular weight: Translated: 55347; Mature: 55216
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAV CCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC SGDSEGEEQEKITVTTSMDIQGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKAL CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCHHHCCCCCCHHHHCCCHHC EMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISFEAVGEVPDEKQYPKYDTFV CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCEE NINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF CCCHHCCHHHEECCCCCCCCEEEEEECCCCHHCCHHHCCCCCEEEEEHHHCCHHHHHHHH CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGK HCEEEEEECCCCCCCCCCHHHHEEECCCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCCCE VKVDDLKCTQCARCQAVCPYEAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLW EEECCCCCCHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCE YVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDVHHTEIPDTPWATQWRDAIE ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH SLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LWETDSPENTAAAVKKKIEG HHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SEKLPEHPGECPEKCPDQEIHVCNGCCGTGEGEEPEIGENEVSGPDSEDLEFEEPEAAV CCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC SGDSEGEEQEKITVTTSMDIQGTHFIYTQATEKSLKILDYDYKRCNGCGICAEICPTKAL CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCHHHCCCCCCHHHHCCCHHC EMGPLHEIATGLDAPAVMMDLEKCTFCRMCSNLCPVHAISFEAVGEVPDEKQYPKYDTFV CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCEE NINEKCLPCLLCEGACPQDAIEVEFTFPKKEEIAPFKEGVEGEIEIDLEKCNFCGICAKF CCCHHCCHHHEECCCCCCCCEEEEEECCCCHHCCHHHCCCCCEEEEEHHHCCHHHHHHHH CDAVILLEREPTPDNPVPFEQILVDTDRCDYCVLCQDICPEEAIKVKGERPCEAPEVGGK HCEEEEEECCCCCCCCCCHHHHEEECCCCCEEEEEHHCCCHHHHCCCCCCCCCCCCCCCE VKVDDLKCTQCARCQAVCPYEAVDLQKPMEGKLSLIEVNLKECDPQGCRGCFNVCPSDLW EEECCCCCCHHHCCCCCCCCHHHCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCE YVPTDPEDPRKIAFAEEYCMYCGACVKACHLDAIKVERTDVHHTEIPDTPWATQWRDAIE ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH SLKTGSRKGVDRAVFRETETLKAQKFMGIEPPCTDEEALAAVQAKIDSLIPVLKSAKVRK HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LWETDSPENTAAAVKKKIEG HHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]