| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226132
Identifier: 21226132
GI number: 21226132
Start: 34526
End: 35647
Strand: Reverse
Name: 21226132
Synonym: MM_0030
Alternate gene names: NA
Gene position: 35647-34526 (Counterclockwise)
Preceding gene: 21226135
Following gene: 21226129
Centisome position: 0.87
GC content: 30.66
Gene sequence:
>1122_bases ATGGTAGGTATTAGTTTCGTATTCGATAAAATATCTAACGGAATCTCTAGTTATAAATCTATTAAGGGAATTGAACAAGC ACACAAAAGTAAAAAGATAGCAAGTGATCTCCGGGAGTACGGATATAAATTGTTAGACTGTAGAAAACTAGAGGCAGCAA AAGATGCATTTGAAGAAGCCCTACGTTTCGATCCAACAAACCCTGAGATACAGATGGGATTATTTAAATCTGCGGTGTTC CAGCCTATATTAACAAAGAACCCTACATATTACGATGCGGAAATAGCATTGAAAAAGATAGAAACGATTCTGAAGAAAAA TCCAAATGACAGACACGCTTACTATTTTATGGGTGAAATATATCGTGACAGTGACCCTAAAAAAGCATCAAATTATTATA AAAAAGTAATTAGCTTAGATCCTAAATCTTATCTAACTGGTCTCGCTTATAATTCACTTGCTTATATAGCCGCCACTGAA AAAGATAATGATTTAGCATTTTATTATATGAAAAAAGCTGCAAATTTATGCGAAATGAATCCAACGGTTTTAAATAATTT AAGTTATCAGCACTTAATTAGAGGACAATATGAAATAACCATCGAAAAACTTACTCGCCTTATAAAACATGATCCCTATA AAATAATTGTTTTCTGGAATATAATTAATTCGTTAAGAATGATTGGTAAATTCCAAGAAGCATACATTTACAACCATATG CTAATAGAATGCATTGAGGATGAAACTACATCATATCATGCAGCTAATTTAGGAGCATTTTTTTTCCAAACAGATCCAAG TGGAGATGGTGTTTTTTTTAAAGAAATTTCTGGGAAAAAATTTTACAGCTATTGTAGCATGGCTTTAACTTGTTATGTTC TAGACCTAACCGAAGAAGCTAATATGTATTTAGAAAAAGCTCAAAAATTAGATTGTTTTAGTAAAGCATCAGCAATAAAA TTCCTCTACTACAATATTGAATGCATACAAAAAAATAATGTGAAACTAATTTATAAACTCGACGATATAAAAGAAAGGCT CATAAAGTTGGATCTTTTTACAAATGTTTCTATTACAGTGGCTAGAAATGAAACTCAATATATTAATATGGCAAAAGTTT AA
Upstream 100 bases:
>100_bases ATATTCTATTATTAAAAATGTTATCTTTTAATACCTATTTATCACTAATTTCAATTAAACTTATTACCTTAAAAATCTAT AATACTTAATTGTGATAGGG
Downstream 100 bases:
>100_bases AAATTAAAATAAAAAATATGGCCGTTTCTTAATGAAGTTGGCATAAAAAAGTAAACACATGCAAGTAAATTCTATTTACT CACATTTTATTCTTTTTTAT
Product: O-linked N-acetylglucosamine transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVGISFVFDKISNGISSYKSIKGIEQAHKSKKIASDLREYGYKLLDCRKLEAAKDAFEEALRFDPTNPEIQMGLFKSAVF QPILTKNPTYYDAEIALKKIETILKKNPNDRHAYYFMGEIYRDSDPKKASNYYKKVISLDPKSYLTGLAYNSLAYIAATE KDNDLAFYYMKKAANLCEMNPTVLNNLSYQHLIRGQYEITIEKLTRLIKHDPYKIIVFWNIINSLRMIGKFQEAYIYNHM LIECIEDETTSYHAANLGAFFFQTDPSGDGVFFKEISGKKFYSYCSMALTCYVLDLTEEANMYLEKAQKLDCFSKASAIK FLYYNIECIQKNNVKLIYKLDDIKERLIKLDLFTNVSITVARNETQYINMAKV
Sequences:
>Translated_373_residues MVGISFVFDKISNGISSYKSIKGIEQAHKSKKIASDLREYGYKLLDCRKLEAAKDAFEEALRFDPTNPEIQMGLFKSAVF QPILTKNPTYYDAEIALKKIETILKKNPNDRHAYYFMGEIYRDSDPKKASNYYKKVISLDPKSYLTGLAYNSLAYIAATE KDNDLAFYYMKKAANLCEMNPTVLNNLSYQHLIRGQYEITIEKLTRLIKHDPYKIIVFWNIINSLRMIGKFQEAYIYNHM LIECIEDETTSYHAANLGAFFFQTDPSGDGVFFKEISGKKFYSYCSMALTCYVLDLTEEANMYLEKAQKLDCFSKASAIK FLYYNIECIQKNNVKLIYKLDDIKERLIKLDLFTNVSITVARNETQYINMAKV >Mature_373_residues MVGISFVFDKISNGISSYKSIKGIEQAHKSKKIASDLREYGYKLLDCRKLEAAKDAFEEALRFDPTNPEIQMGLFKSAVF QPILTKNPTYYDAEIALKKIETILKKNPNDRHAYYFMGEIYRDSDPKKASNYYKKVISLDPKSYLTGLAYNSLAYIAATE KDNDLAFYYMKKAANLCEMNPTVLNNLSYQHLIRGQYEITIEKLTRLIKHDPYKIIVFWNIINSLRMIGKFQEAYIYNHM LIECIEDETTSYHAANLGAFFFQTDPSGDGVFFKEISGKKFYSYCSMALTCYVLDLTEEANMYLEKAQKLDCFSKASAIK FLYYNIECIQKNNVKLIYKLDDIKERLIKLDLFTNVSITVARNETQYINMAKV
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43193; Mature: 43193
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGISFVFDKISNGISSYKSIKGIEQAHKSKKIASDLREYGYKLLDCRKLEAAKDAFEEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRFDPTNPEIQMGLFKSAVFQPILTKNPTYYDAEIALKKIETILKKNPNDRHAYYFMGEI HCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEE YRDSDPKKASNYYKKVISLDPKSYLTGLAYNSLAYIAATEKDNDLAFYYMKKAANLCEMN ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEHHHCHHHCCC PTVLNNLSYQHLIRGQYEITIEKLTRLIKHDPYKIIVFWNIINSLRMIGKFQEAYIYNHM CHHHHCCCHHHHHCCCCEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LIECIEDETTSYHAANLGAFFFQTDPSGDGVFFKEISGKKFYSYCSMALTCYVLDLTEEA HHHHHCCCCCCEEEECCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHEEEEEECHHH NMYLEKAQKLDCFSKASAIKFLYYNIECIQKNNVKLIYKLDDIKERLIKLDLFTNVSITV HHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHEEECCEEEEE ARNETQYINMAKV EECCCCEEEEECC >Mature Secondary Structure MVGISFVFDKISNGISSYKSIKGIEQAHKSKKIASDLREYGYKLLDCRKLEAAKDAFEEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LRFDPTNPEIQMGLFKSAVFQPILTKNPTYYDAEIALKKIETILKKNPNDRHAYYFMGEI HCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEE YRDSDPKKASNYYKKVISLDPKSYLTGLAYNSLAYIAATEKDNDLAFYYMKKAANLCEMN ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEHHHCHHHCCC PTVLNNLSYQHLIRGQYEITIEKLTRLIKHDPYKIIVFWNIINSLRMIGKFQEAYIYNHM CHHHHCCCHHHHHCCCCEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH LIECIEDETTSYHAANLGAFFFQTDPSGDGVFFKEISGKKFYSYCSMALTCYVLDLTEEA HHHHHCCCCCCEEEECCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHEEEEEECHHH NMYLEKAQKLDCFSKASAIKFLYYNIECIQKNNVKLIYKLDDIKERLIKLDLFTNVSITV HHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHEEECCEEEEE ARNETQYINMAKV EECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA