Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226111

Identifier: 21226111

GI number: 21226111

Start: 9608

End: 10900

Strand: Reverse

Name: 21226111

Synonym: MM_0009

Alternate gene names: NA

Gene position: 10900-9608 (Counterclockwise)

Preceding gene: 21226112

Following gene: 21226110

Centisome position: 0.27

GC content: 51.12

Gene sequence:

>1293_bases
ATGCGTCTGGTTCAGGTACTTATTCCTGTGGGGAAGAGGCAGCCTGTGCTGGCAGTTCTGGATGACGAGGGAATAGACTA
TGCCGTATGGGGCGAAACAGGAAGAAAGGACTTTGAGGCCCTTGTTCAGTTTCCAGTCCCTCCTATTGGCGTGGAACCGG
TGCTTGAGAGGTTGCGCAAAGCCGGGGTCAGCGAAAACACTTATACAATCGTCCTGGCGCCTGAAACTGTAGTCTCGACC
CGCATCGAAGCTCTGAAGCAGCGTTATTCCGGATCCCGAATCTCAAGGGAAGAATTAACTGCGCGCGCAGAGGACCTTGC
ACCCGAAACTTCGACCTATATTGCATTTCTTGTCCTGAGTACGGTTATTGCAACCGGCGGTCTCCTGCTCGATTCGGCTG
CAACAATTATCGGGGCTATGGTTGTGGCTCCGCTTATGGGGCCTGCCATATCTGCGAGTGTAGGGACTGTCCTCGATAAC
AGGAAACTTGCTTCCAGAGGGATAAAGATGCAGGTGGGAGGGCTTCTGCTTGCAATTGCGATAGGTGCACTGCTTGGAGT
ACTTCTGAAAGAATCCATACTTTTGCCTCCCGGTCTCGATATTCGTGAAATCCCACAGGTCGCCGAAAGGACAAGCCCTA
ACTTTCTGTCCCTTTTCCTTGCCCTGGGGTCAGGCATAGCAGGCGCTATCAGTATAATACGGGGTTCAGGGTCTGCTCTT
GTAGGGGTTGCAATTGCGATCGCTCTTGTCCCTCCGGCTGCAACTTCAGGGCTGGGAATCGCATGGGGGCTTTCCGGAGT
GGCAATTGCAGCTGCCGTGCTTGTGCTTGTTAATCTGCTTGCAGTTAACATCTCAGCTCTGATAATGCTCTGGATTTCCG
GTTTTCGCCCGGAAGGAACAGAAGCAGCCGGACGTGCTCGTTCTTCTGTGATATCGCATACTGTTTTCCTTGCCCTTTTA
ATTGCCTTACTTTCCGTAGCTCTCGGGCTTGTTACGTATACTTCCTTCCAGGCAACCCTTGTAGAACAGGAAATAAACGG
AGAAATGACAGCCATGTTTCAGGAACCCGAATATGCAGAAATGGGTCTGACACTTGAAGGGGTTACAGTTGACTATATGC
CTGCAGATATCCTCTTAAATAAACCTGCAAAGATCTCTGTTCTTGTAGGCCGTAGAGCAGGCCAGGAGGTCCCTCCTGAC
ATAGCCCGCAAAGCGAACATGCGCCTGACAGAATCTACGGGCAAAGATATCATGATCAGAGTTGGTTTCGTAGAAGCACA
GAGCTTCCCATAA

Upstream 100 bases:

>100_bases
CAAACACCTGGCTACTATAAGTTATATTTTTTTGTAATTTATACTGCATGTTTTATTTTATTCTGGTTAATAATAATTAT
TCGAATAGCGTATATTTATT

Downstream 100 bases:

>100_bases
TTGCCTTCTTATAATTAAATTCTAACTTTTATTAGTCTGTATTTTTACCTGAAAATTCTAGCTTCTTGCTGCTGCCTGTT
TTATTTCACCTTCAATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRLVQVLIPVGKRQPVLAVLDDEGIDYAVWGETGRKDFEALVQFPVPPIGVEPVLERLRKAGVSENTYTIVLAPETVVST
RIEALKQRYSGSRISREELTARAEDLAPETSTYIAFLVLSTVIATGGLLLDSAATIIGAMVVAPLMGPAISASVGTVLDN
RKLASRGIKMQVGGLLLAIAIGALLGVLLKESILLPPGLDIREIPQVAERTSPNFLSLFLALGSGIAGAISIIRGSGSAL
VGVAIAIALVPPAATSGLGIAWGLSGVAIAAAVLVLVNLLAVNISALIMLWISGFRPEGTEAAGRARSSVISHTVFLALL
IALLSVALGLVTYTSFQATLVEQEINGEMTAMFQEPEYAEMGLTLEGVTVDYMPADILLNKPAKISVLVGRRAGQEVPPD
IARKANMRLTESTGKDIMIRVGFVEAQSFP

Sequences:

>Translated_430_residues
MRLVQVLIPVGKRQPVLAVLDDEGIDYAVWGETGRKDFEALVQFPVPPIGVEPVLERLRKAGVSENTYTIVLAPETVVST
RIEALKQRYSGSRISREELTARAEDLAPETSTYIAFLVLSTVIATGGLLLDSAATIIGAMVVAPLMGPAISASVGTVLDN
RKLASRGIKMQVGGLLLAIAIGALLGVLLKESILLPPGLDIREIPQVAERTSPNFLSLFLALGSGIAGAISIIRGSGSAL
VGVAIAIALVPPAATSGLGIAWGLSGVAIAAAVLVLVNLLAVNISALIMLWISGFRPEGTEAAGRARSSVISHTVFLALL
IALLSVALGLVTYTSFQATLVEQEINGEMTAMFQEPEYAEMGLTLEGVTVDYMPADILLNKPAKISVLVGRRAGQEVPPD
IARKANMRLTESTGKDIMIRVGFVEAQSFP
>Mature_430_residues
MRLVQVLIPVGKRQPVLAVLDDEGIDYAVWGETGRKDFEALVQFPVPPIGVEPVLERLRKAGVSENTYTIVLAPETVVST
RIEALKQRYSGSRISREELTARAEDLAPETSTYIAFLVLSTVIATGGLLLDSAATIIGAMVVAPLMGPAISASVGTVLDN
RKLASRGIKMQVGGLLLAIAIGALLGVLLKESILLPPGLDIREIPQVAERTSPNFLSLFLALGSGIAGAISIIRGSGSAL
VGVAIAIALVPPAATSGLGIAWGLSGVAIAAAVLVLVNLLAVNISALIMLWISGFRPEGTEAAGRARSSVISHTVFLALL
IALLSVALGLVTYTSFQATLVEQEINGEMTAMFQEPEYAEMGLTLEGVTVDYMPADILLNKPAKISVLVGRRAGQEVPPD
IARKANMRLTESTGKDIMIRVGFVEAQSFP

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI20129117, Length=161, Percent_Identity=31.6770186335404, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI19921100, Length=192, Percent_Identity=32.2916666666667, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281364738, Length=159, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 45162; Mature: 45162

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVQVLIPVGKRQPVLAVLDDEGIDYAVWGETGRKDFEALVQFPVPPIGVEPVLERLRK
CCCEEEECCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
AGVSENTYTIVLAPETVVSTRIEALKQRYSGSRISREELTARAEDLAPETSTYIAFLVLS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
TVIATGGLLLDSAATIIGAMVVAPLMGPAISASVGTVLDNRKLASRGIKMQVGGLLLAIA
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCEEHHHHHHHHHH
IGALLGVLLKESILLPPGLDIREIPQVAERTSPNFLSLFLALGSGIAGAISIIRGSGSAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCHH
VGVAIAIALVPPAATSGLGIAWGLSGVAIAAAVLVLVNLLAVNISALIMLWISGFRPEGT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAAGRARSSVISHTVFLALLIALLSVALGLVTYTSFQATLVEQEINGEMTAMFQEPEYAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
MGLTLEGVTVDYMPADILLNKPAKISVLVGRRAGQEVPPDIARKANMRLTESTGKDIMIR
CCEEEECCEEECCCHHHEECCCCEEEEEEECCCCCCCCHHHHHHCCCEEECCCCCEEEEE
VGFVEAQSFP
EEEEECCCCC
>Mature Secondary Structure
MRLVQVLIPVGKRQPVLAVLDDEGIDYAVWGETGRKDFEALVQFPVPPIGVEPVLERLRK
CCCEEEECCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHH
AGVSENTYTIVLAPETVVSTRIEALKQRYSGSRISREELTARAEDLAPETSTYIAFLVLS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
TVIATGGLLLDSAATIIGAMVVAPLMGPAISASVGTVLDNRKLASRGIKMQVGGLLLAIA
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCEEHHHHHHHHHH
IGALLGVLLKESILLPPGLDIREIPQVAERTSPNFLSLFLALGSGIAGAISIIRGSGSAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCHH
VGVAIAIALVPPAATSGLGIAWGLSGVAIAAAVLVLVNLLAVNISALIMLWISGFRPEGT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EAAGRARSSVISHTVFLALLIALLSVALGLVTYTSFQATLVEQEINGEMTAMFQEPEYAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
MGLTLEGVTVDYMPADILLNKPAKISVLVGRRAGQEVPPDIARKANMRLTESTGKDIMIR
CCEEEECCEEECCCHHHEECCCCEEEEEEECCCCCCCCHHHHHHCCCEEECCCCCEEEEE
VGFVEAQSFP
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]