Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226110

Identifier: 21226110

GI number: 21226110

Start: 8186

End: 9343

Strand: Reverse

Name: 21226110

Synonym: MM_0008

Alternate gene names: NA

Gene position: 9343-8186 (Counterclockwise)

Preceding gene: 21226111

Following gene: NA

Centisome position: 0.23

GC content: 49.48

Gene sequence:

>1158_bases
GTGCCTCCTGTCGGAGTCGAACCTTTGCTTGAAAAGCTGCGCAAGGCAGGAATTAGCGAGGATACATATACGATTGTCCT
GTCACCGGAGATGGTGATTTCGAAGCGGATCGATGTCCTGAAAAAACGCTTTCCTGACCAGCGGATTTCCAGAGAAGAGC
TCATTGCGCGTGCAGAAGATCTTGCCCCTCCTGCCTCAACATATATCGCATTTCTGGTGCTGAGCACGGCTATTGCAACC
GGCGGTCTCCTGCTCGATTCGGCTGCAACAATTATCGGGGCCATGGTTATAGCTCCTTTAATGGGACCTGCAATCTCTAC
AAGTGTAGGTACAGTTGTTTATGATCGGAAGCTTATTACTCGCGGGTTAACTCTGCAGGTGGCAGGCCTTTTGCTTGCAA
TTGCAGTAGGTGCCTTTATCGGCTTTCTGATCACGGAATTAGGCATGATGCCGCCAGGAATAGATATCCGCGAGATTTCA
CAGGTAGCTGAGCGCACAAACCCAACCTTCCTGTCTCTATTTCTTGCTCTGGGATCCGGTATTGCAGGTGCCATAAGTAT
CATAAGAAATGCAGGGTCTGCTCTTGTAGGGGTTGCGATTGCAGCTGCCCTTGTCCCTCCCGCAGCAACTTCAGGGCTTG
GGTTTGCGTTTGGGCTACCTGCTGTAGCGATTATTTCTGCGGTTCTGGTGCTGGTGAATGTGCTTGCTATCAATATCTCC
GCTCTTATCCTTTTCTGGCTTTCAGGCTTCAGGCCCCTCGGATCTTCGGCTGTAGGCAGAGCCCGTAAAGCTGTGGTCTT
GAATATTCTGGTGCTCGGAGTAGCAATAGCAATACTTTCAACTGTACTCGGGCTTGTAACCTATGTATCCTCACAAACCG
CGCTTATAGAACAGCAGGCAAAAGCAGAAGTATCAGTTATGCTTAATGAATCCGAATATGAGGATATGAGACTGGTCACT
GAGAGTGTAGATGTCAGTTATAGACCTGCGGACCTGATTTTAAATGAACCTGCAAGGGTAACAGTCATTTTATATCGCAG
GGCAGGTCAGGAACTGCCCCCGGGTATAGCTCAGAGGATTGATGACCGCCTGACAGAGTTTACAGGCAGAGAAGTCAGGG
TCAGGGTAGGGTTCATAGAAGCTCAGCAGACCACTTGA

Upstream 100 bases:

>100_bases
GAAAGATTCTGTACTGTAAGCTCTCGACAGCGAGGAGATTGACTACGCAGTATGGAACGAGACCGGAAGAGGAGACTTTG
AAGCTGTTATCCAGTTTCCC

Downstream 100 bases:

>100_bases
AAACTCTTTATAGCTCTAAAAAAATTGAAAAAATCAGCTCATCAATAGTGTCAGACTTTCAATAGTGTCAGACTTTCAAT
AGTGTCAGACCCTGTTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MPPVGVEPLLEKLRKAGISEDTYTIVLSPEMVISKRIDVLKKRFPDQRISREELIARAEDLAPPASTYIAFLVLSTAIAT
GGLLLDSAATIIGAMVIAPLMGPAISTSVGTVVYDRKLITRGLTLQVAGLLLAIAVGAFIGFLITELGMMPPGIDIREIS
QVAERTNPTFLSLFLALGSGIAGAISIIRNAGSALVGVAIAAALVPPAATSGLGFAFGLPAVAIISAVLVLVNVLAINIS
ALILFWLSGFRPLGSSAVGRARKAVVLNILVLGVAIAILSTVLGLVTYVSSQTALIEQQAKAEVSVMLNESEYEDMRLVT
ESVDVSYRPADLILNEPARVTVILYRRAGQELPPGIAQRIDDRLTEFTGREVRVRVGFIEAQQTT

Sequences:

>Translated_385_residues
MPPVGVEPLLEKLRKAGISEDTYTIVLSPEMVISKRIDVLKKRFPDQRISREELIARAEDLAPPASTYIAFLVLSTAIAT
GGLLLDSAATIIGAMVIAPLMGPAISTSVGTVVYDRKLITRGLTLQVAGLLLAIAVGAFIGFLITELGMMPPGIDIREIS
QVAERTNPTFLSLFLALGSGIAGAISIIRNAGSALVGVAIAAALVPPAATSGLGFAFGLPAVAIISAVLVLVNVLAINIS
ALILFWLSGFRPLGSSAVGRARKAVVLNILVLGVAIAILSTVLGLVTYVSSQTALIEQQAKAEVSVMLNESEYEDMRLVT
ESVDVSYRPADLILNEPARVTVILYRRAGQELPPGIAQRIDDRLTEFTGREVRVRVGFIEAQQTT
>Mature_384_residues
PPVGVEPLLEKLRKAGISEDTYTIVLSPEMVISKRIDVLKKRFPDQRISREELIARAEDLAPPASTYIAFLVLSTAIATG
GLLLDSAATIIGAMVIAPLMGPAISTSVGTVVYDRKLITRGLTLQVAGLLLAIAVGAFIGFLITELGMMPPGIDIREISQ
VAERTNPTFLSLFLALGSGIAGAISIIRNAGSALVGVAIAAALVPPAATSGLGFAFGLPAVAIISAVLVLVNVLAINISA
LILFWLSGFRPLGSSAVGRARKAVVLNILVLGVAIAILSTVLGLVTYVSSQTALIEQQAKAEVSVMLNESEYEDMRLVTE
SVDVSYRPADLILNEPARVTVILYRRAGQELPPGIAQRIDDRLTEFTGREVRVRVGFIEAQQTT

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI20129117, Length=153, Percent_Identity=32.6797385620915, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19921100, Length=174, Percent_Identity=33.9080459770115, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281364738, Length=217, Percent_Identity=27.1889400921659, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 40676; Mature: 40544

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVGVEPLLEKLRKAGISEDTYTIVLSPEMVISKRIDVLKKRFPDQRISREELIARAED
CCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH
LAPPASTYIAFLVLSTAIATGGLLLDSAATIIGAMVIAPLMGPAISTSVGTVVYDRKLIT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGLTLQVAGLLLAIAVGAFIGFLITELGMMPPGIDIREISQVAERTNPTFLSLFLALGSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCC
IAGAISIIRNAGSALVGVAIAAALVPPAATSGLGFAFGLPAVAIISAVLVLVNVLAINIS
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALILFWLSGFRPLGSSAVGRARKAVVLNILVLGVAIAILSTVLGLVTYVSSQTALIEQQA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KAEVSVMLNESEYEDMRLVTESVDVSYRPADLILNEPARVTVILYRRAGQELPPGIAQRI
HHHHHEEECCCCHHHHHHHHHHCCCCCCCHHHEECCCCEEEEEEEECCCCCCCCHHHHHH
DDRLTEFTGREVRVRVGFIEAQQTT
HHHHHHHCCCEEEEEEEEEECCCCC
>Mature Secondary Structure 
PPVGVEPLLEKLRKAGISEDTYTIVLSPEMVISKRIDVLKKRFPDQRISREELIARAED
CCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH
LAPPASTYIAFLVLSTAIATGGLLLDSAATIIGAMVIAPLMGPAISTSVGTVVYDRKLIT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RGLTLQVAGLLLAIAVGAFIGFLITELGMMPPGIDIREISQVAERTNPTFLSLFLALGSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCC
IAGAISIIRNAGSALVGVAIAAALVPPAATSGLGFAFGLPAVAIISAVLVLVNVLAINIS
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALILFWLSGFRPLGSSAVGRARKAVVLNILVLGVAIAILSTVLGLVTYVSSQTALIEQQA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KAEVSVMLNESEYEDMRLVTESVDVSYRPADLILNEPARVTVILYRRAGQELPPGIAQRI
HHHHHEEECCCCHHHHHHHHHHCCCCCCCHHHEECCCCEEEEEEEECCCCCCCCHHHHHH
DDRLTEFTGREVRVRVGFIEAQQTT
HHHHHHHCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]