Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212225092

Identifier: 212225092

GI number: 212225092

Start: 1821808

End: 1822446

Strand: Reverse

Name: 212225092

Synonym: TON_1940

Alternate gene names: NA

Gene position: 1822446-1821808 (Counterclockwise)

Preceding gene: 212225093

Following gene: 212225091

Centisome position: 98.64

GC content: 51.96

Gene sequence:

>639_bases
ATGTTCGGAGAGCACGAGCTCAGAACGAAGTTCATCAAAATCCTCAACAAGAAGATACACCTCCTCGAAAGGGCCGATGA
CAGCGTGCTTTACACTCGGGATGATGTTCGAGTTCTCATAAAGAAGGGCGATGGCGCCCTCAAGGTACTCCCGGCCCCAG
CTGAGGGCTATGGCGTCAAGTTCCTCATGATAAGGTTCTCACCAAGGATAGCCGTTCCCCCCAGGAAAAGACTGACCGGA
TACCTCTCCGCCCCCGTGGACATTGAAGTCAAGAGCGGAAACGCCACGATAGACCGCTTTGTTGTAGGAAGGGAGAAATA
CGCCCTCTATGGTGAGAATAACATCGGAGTGATAGCGCGCTATCACGTGAGTGAGTTCCACGATAAAATTCCCGACGAGC
TAGGAATCATGAAGCTCGTGATAAACAACCCCACTGACGAATGGAAGCTCGTGGAAAGGATAACCGTCCCGATAAGGAAC
AGTGTTATGTTCTACTCCAGCGAAAAGGCCTACTATCCCCTCGTGATACTGACGACGAAAGAGCCCTACGAGGTCAATAA
CACCGGCAACCCGCCCGATGGGACGCTCAAGGCCACCCATAAAGCAGAACCTCTACCGAACTTCAAGATGAGGTGGTGA

Upstream 100 bases:

>100_bases
CAAATCGAGGACATCGGTTTTGAGAAGGTCCAAGGCTTTTTTGCTTTTCAGTTTTCCACTTTCAGGCAAACTTTAAATCT
TTCAAAACCTATTTTCTTTC

Downstream 100 bases:

>100_bases
CGATGGCTAACGTGACGGGCAACACGACCACAAATTCACCGAGAGGCGTGGGAAGTCTGATACCTATTGAGATAAGTCTC
TGGACGGGCATTGAGGCGAT

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFGEHELRTKFIKILNKKIHLLERADDSVLYTRDDVRVLIKKGDGALKVLPAPAEGYGVKFLMIRFSPRIAVPPRKRLTG
YLSAPVDIEVKSGNATIDRFVVGREKYALYGENNIGVIARYHVSEFHDKIPDELGIMKLVINNPTDEWKLVERITVPIRN
SVMFYSSEKAYYPLVILTTKEPYEVNNTGNPPDGTLKATHKAEPLPNFKMRW

Sequences:

>Translated_212_residues
MFGEHELRTKFIKILNKKIHLLERADDSVLYTRDDVRVLIKKGDGALKVLPAPAEGYGVKFLMIRFSPRIAVPPRKRLTG
YLSAPVDIEVKSGNATIDRFVVGREKYALYGENNIGVIARYHVSEFHDKIPDELGIMKLVINNPTDEWKLVERITVPIRN
SVMFYSSEKAYYPLVILTTKEPYEVNNTGNPPDGTLKATHKAEPLPNFKMRW
>Mature_212_residues
MFGEHELRTKFIKILNKKIHLLERADDSVLYTRDDVRVLIKKGDGALKVLPAPAEGYGVKFLMIRFSPRIAVPPRKRLTG
YLSAPVDIEVKSGNATIDRFVVGREKYALYGENNIGVIARYHVSEFHDKIPDELGIMKLVINNPTDEWKLVERITVPIRN
SVMFYSSEKAYYPLVILTTKEPYEVNNTGNPPDGTLKATHKAEPLPNFKMRW

Specific function: Unknown

COG id: COG2430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24226; Mature: 24226

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGEHELRTKFIKILNKKIHLLERADDSVLYTRDDVRVLIKKGDGALKVLPAPAEGYGVK
CCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEEEEEECCCEEEEEECCCCCCCEE
FLMIRFSPRIAVPPRKRLTGYLSAPVDIEVKSGNATIDRFVVGREKYALYGENNIGVIAR
EEEEEECCCCCCCCHHHHEEEECCCEEEEEECCCCEEEEEEECCCEEEEECCCCEEEEEE
YHVSEFHDKIPDELGIMKLVINNPTDEWKLVERITVPIRNSVMFYSSEKAYYPLVILTTK
EEHHHHHHCCCCHHCEEEEEECCCCCHHEEEEEEEECCCCEEEEEECCCCEEEEEEEEEC
EPYEVNNTGNPPDGTLKATHKAEPLPNFKMRW
CCEEECCCCCCCCCCEEECCCCCCCCCCEECC
>Mature Secondary Structure
MFGEHELRTKFIKILNKKIHLLERADDSVLYTRDDVRVLIKKGDGALKVLPAPAEGYGVK
CCCCHHHHHHHHHHHHHHHHEEECCCCCEEEECCCEEEEEEECCCEEEEEECCCCCCCEE
FLMIRFSPRIAVPPRKRLTGYLSAPVDIEVKSGNATIDRFVVGREKYALYGENNIGVIAR
EEEEEECCCCCCCCHHHHEEEECCCEEEEEECCCCEEEEEEECCCEEEEECCCCEEEEEE
YHVSEFHDKIPDELGIMKLVINNPTDEWKLVERITVPIRNSVMFYSSEKAYYPLVILTTK
EEHHHHHHCCCCHHCEEEEEECCCCCHHEEEEEEEECCCCEEEEEECCCCEEEEEEEEEC
EPYEVNNTGNPPDGTLKATHKAEPLPNFKMRW
CCEEECCCCCCCCCCEEECCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA