| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225063
Identifier: 212225063
GI number: 212225063
Start: 1800613
End: 1801146
Strand: Reverse
Name: 212225063
Synonym: TON_1911
Alternate gene names: NA
Gene position: 1801146-1800613 (Counterclockwise)
Preceding gene: 212225064
Following gene: 212225062
Centisome position: 97.49
GC content: 53.37
Gene sequence:
>534_bases ATGTTCCACTTCAAGCTAACCCCCGAGCTCAGGAAGGAGTTAAAGGATCCCCTCGGAAAGCTCATCCGGGGGGAGATACC CAAGCCATACCTCATGATTAGGGAAGAGCTTGAAAGGGCCAGGCACGTTGTCACCGTCGGCGACGTTGTTACAGAAAACG TCCTCAGGCTCGGGATAAAGCCGAGCCTGGCCATCTACGATCATAAAACTAAAAGACAGGAATACAGTCCGGACATTGAG AGCGATGCGGTCATAATGACCGTGCAGAATCCGCCCGGAACAATAACGAAAGCTTTATTAAACGCAATCAAAAAGGGATT TGGACTAGCCGAGAGGGGCAGAAAGGTTTACATAAAGGTGTGCGGAGAGGAAGACCTCGCGGCGATTCCGGCCGTGCTCT ACGCCCCCGAGGGCTCGGTGGTGCTCTACGGCCAGCCCGACGAGGGGGTAGTGCTTATAAAGGTAACACCCGAATGCAAG CTCAAGTGCGGGAGGCTCATGTCTAAGATGGAGGTGGTTCGCGATGGAGATTAA
Upstream 100 bases:
>100_bases AGTGGTTCGACCTCGTCATAATCACTGAACCCGAGAAGTCGAAAATAGCCCAGAAGCTGGGCGTCAAAGTCCCAGGAAAG TACGCCATAAGGGTTAGATG
Downstream 100 bases:
>100_bases GGTTACCGAGATTAAGGAGAACAAGCTCCTCGGAAGAAAGGAGATATACTTCGACGTCATTCACGAGGGTGAGCCAACCC CGAGCAGGAAGGACGTCAAG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK LKCGRLMSKMEVVRDGD
Sequences:
>Translated_177_residues MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK LKCGRLMSKMEVVRDGD >Mature_177_residues MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK LKCGRLMSKMEVVRDGD
Specific function: Unknown
COG id: COG1909
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0218 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1911_THEON (B6YW36)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002308299.1 - GeneID: 7017583 - GenomeReviews: CP000855_GR - KEGG: ton:TON_1911 - HOGENOM: HBG724144 - OMA: KPFGKVY - ProtClustDB: PRK01160 - HAMAP: MF_00590 - InterPro: IPR007164 - PIRSF: PIRSF006533
Pfam domain/function: PF04019 DUF359
EC number: NA
Molecular weight: Translated: 19753; Mature: 19753
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIK CCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCC PSLAIYDHKTKRQEYSPDIESDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKV CCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCEEEEEE CGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECKLKCGRLMSKMEVVRDGD ECCCCHHHCCEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIK CCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCC PSLAIYDHKTKRQEYSPDIESDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKV CCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCEEEEEE CGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECKLKCGRLMSKMEVVRDGD ECCCCHHHCCEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA