| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225006
Identifier: 212225006
GI number: 212225006
Start: 1734419
End: 1735939
Strand: Reverse
Name: 212225006
Synonym: TON_1854
Alternate gene names: NA
Gene position: 1735939-1734419 (Counterclockwise)
Preceding gene: 212225007
Following gene: 212224987
Centisome position: 93.96
GC content: 31.49
Gene sequence:
>1521_bases ATGGGGAGGCATAAAAAACAATTGCTATCGTATTTACTATTGATCTTTAGTTTGCTGTTACCAATTCTCTTATATAGTGG ATTAGTTAATCCGTTTGCACCTTTGCACGTTGTACCTATATATGAGGCGATTTATTACGGGCACGGGGGAGAATCATTTA ATACTAGGACACCTGGGTTTTATTCTTTAGGATCCATAATATCCTTAATCGCGGGAATTTCTGCCAGAACTCTTATGTTT TTACCTTTACAACTTCTCCCATTTATCCTAACTATCTACCTCTTATTTTGGAAGATTTCTGGTAGTAGGGCTATTGCTAA TTTAGTATCTCTTATCTATGCTACTACTGCAAATGTAGAATATTTCTTTTTCTGGATGCATGGTATTGGAAGTATATTTT TCTTTATTATAACATACTTCATAATTAAAATGCTAAGAGGCACTACAAAAGACTCTAAAATAACTATCATTATACTAATA GTAGCAACATCTCTAATATACACCTCTTACGATGTGACATTTGGTATGCTACTGTTCCTTATTAGCATCATATTCTTCAT ATTATTTATTAACAAAAATATAGTATTATCCAAAGGATTTTTTATTGTGCTTATTTACATGCTTACAGTCTTGTTGGGTA TGCATGGGTATGTTTATGATATATTTGTAAAGCAAACGGTCTATTATAGGGTTGGTATTACTGGTTTTGAAAAGTTTATT GCAAGTTATATATCACAGGAGAAGTCTGGGTTTCCATGGAAAGATATGCTTATTGCTTATCCGAAAATTATTAGCATATT GGGGCTTATAAAATATGGAATTCTATTAACATTTATTTTTCTCGGAATAGTATATATGGTTAAACAGCTTAAAATTTCGC GAAACTTAAACTCATATACCATGGTTTTCCTGGCGATACTAATAGCCAATATTGGGTATCTTATAGCTCGTCTTCCATTT GGATATCTTTCCATTGGCTCACTATTTCTTCCAGGGATAGTTGGTCTTTGTTTTATCTATAGACATTTTAAAGATTATAA AAGACGAGTTAGTTTACTACTCATAGGAGTTATTATAGTGTGTGCCAATTCAGTAAATTATTTAGTATTAAGTAGTGAGG ACTTAATAAACAGAGATTTGGGATATTATAAATATGTTGAAATAAGTGCTGGATGGTATTCGGAATACAAAGATGACAGT AAAATTGGTTTAACAGATGTACTTACCAAAAGCTTTTTCTGGGAACATATTTGCCATAATATCATTAAGAAAGGAGAAAA ACTGCCGTCTATATATTCCTATTTTTGGTCTGATCCCGCATATGTATTATCTGTGGTTAAAAAAGGTAAAAACGATTCAT TGAAAAGCGCGTACTATATACTAAACATACGTTTAAATACTCTCGAATTTGATGCATGGGTAACTACTAAATCTTGGCAG TATTACTTAGAAGTTATTGACAGCGATTTTAGACTAAATAGAATATATGACTCAAGGAATATAATCATAATAGAAGTGTA A
Upstream 100 bases:
>100_bases ATGCCGAGATATAGCAAGAAAGTATAGTTTTGAAAATGTTGTTGAAAAATATGTTGAAATTTACCACAAACTTAGAAGTG GAGAGCAAAGGTGAGCAAGA
Downstream 100 bases:
>100_bases GTAGTCAGTAGTAGTTATAATTACTATTTAACGTCGCAACAAATTTAAAATTTTTTAACAACTATCAAACAATCCAGCCA GTATAGCAGATACATATTCT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MGRHKKQLLSYLLLIFSLLLPILLYSGLVNPFAPLHVVPIYEAIYYGHGGESFNTRTPGFYSLGSIISLIAGISARTLMF LPLQLLPFILTIYLLFWKISGSRAIANLVSLIYATTANVEYFFFWMHGIGSIFFFIITYFIIKMLRGTTKDSKITIIILI VATSLIYTSYDVTFGMLLFLISIIFFILFINKNIVLSKGFFIVLIYMLTVLLGMHGYVYDIFVKQTVYYRVGITGFEKFI ASYISQEKSGFPWKDMLIAYPKIISILGLIKYGILLTFIFLGIVYMVKQLKISRNLNSYTMVFLAILIANIGYLIARLPF GYLSIGSLFLPGIVGLCFIYRHFKDYKRRVSLLLIGVIIVCANSVNYLVLSSEDLINRDLGYYKYVEISAGWYSEYKDDS KIGLTDVLTKSFFWEHICHNIIKKGEKLPSIYSYFWSDPAYVLSVVKKGKNDSLKSAYYILNIRLNTLEFDAWVTTKSWQ YYLEVIDSDFRLNRIYDSRNIIIIEV
Sequences:
>Translated_506_residues MGRHKKQLLSYLLLIFSLLLPILLYSGLVNPFAPLHVVPIYEAIYYGHGGESFNTRTPGFYSLGSIISLIAGISARTLMF LPLQLLPFILTIYLLFWKISGSRAIANLVSLIYATTANVEYFFFWMHGIGSIFFFIITYFIIKMLRGTTKDSKITIIILI VATSLIYTSYDVTFGMLLFLISIIFFILFINKNIVLSKGFFIVLIYMLTVLLGMHGYVYDIFVKQTVYYRVGITGFEKFI ASYISQEKSGFPWKDMLIAYPKIISILGLIKYGILLTFIFLGIVYMVKQLKISRNLNSYTMVFLAILIANIGYLIARLPF GYLSIGSLFLPGIVGLCFIYRHFKDYKRRVSLLLIGVIIVCANSVNYLVLSSEDLINRDLGYYKYVEISAGWYSEYKDDS KIGLTDVLTKSFFWEHICHNIIKKGEKLPSIYSYFWSDPAYVLSVVKKGKNDSLKSAYYILNIRLNTLEFDAWVTTKSWQ YYLEVIDSDFRLNRIYDSRNIIIIEV >Mature_505_residues GRHKKQLLSYLLLIFSLLLPILLYSGLVNPFAPLHVVPIYEAIYYGHGGESFNTRTPGFYSLGSIISLIAGISARTLMFL PLQLLPFILTIYLLFWKISGSRAIANLVSLIYATTANVEYFFFWMHGIGSIFFFIITYFIIKMLRGTTKDSKITIIILIV ATSLIYTSYDVTFGMLLFLISIIFFILFINKNIVLSKGFFIVLIYMLTVLLGMHGYVYDIFVKQTVYYRVGITGFEKFIA SYISQEKSGFPWKDMLIAYPKIISILGLIKYGILLTFIFLGIVYMVKQLKISRNLNSYTMVFLAILIANIGYLIARLPFG YLSIGSLFLPGIVGLCFIYRHFKDYKRRVSLLLIGVIIVCANSVNYLVLSSEDLINRDLGYYKYVEISAGWYSEYKDDSK IGLTDVLTKSFFWEHICHNIIKKGEKLPSIYSYFWSDPAYVLSVVKKGKNDSLKSAYYILNIRLNTLEFDAWVTTKSWQY YLEVIDSDFRLNRIYDSRNIIIIEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58280; Mature: 58149
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHKKQLLSYLLLIFSLLLPILLYSGLVNPFAPLHVVPIYEAIYYGHGGESFNTRTPGF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCH YSLGSIISLIAGISARTLMFLPLQLLPFILTIYLLFWKISGSRAIANLVSLIYATTANVE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC YFFFWMHGIGSIFFFIITYFIIKMLRGTTKDSKITIIILIVATSLIYTSYDVTFGMLLFL EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH ISIIFFILFINKNIVLSKGFFIVLIYMLTVLLGMHGYVYDIFVKQTVYYRVGITGFEKFI HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH ASYISQEKSGFPWKDMLIAYPKIISILGLIKYGILLTFIFLGIVYMVKQLKISRNLNSYT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MVFLAILIANIGYLIARLPFGYLSIGSLFLPGIVGLCFIYRHFKDYKRRVSLLLIGVIIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CANSVNYLVLSSEDLINRDLGYYKYVEISAGWYSEYKDDSKIGLTDVLTKSFFWEHICHN HCCCCCEEEECCHHHHHCCCCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IIKKGEKLPSIYSYFWSDPAYVLSVVKKGKNDSLKSAYYILNIRLNTLEFDAWVTTKSWQ HHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEECCHHH YYLEVIDSDFRLNRIYDSRNIIIIEV HHHHHHCCCCHHHEEECCCCEEEEEC >Mature Secondary Structure GRHKKQLLSYLLLIFSLLLPILLYSGLVNPFAPLHVVPIYEAIYYGHGGESFNTRTPGF CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCH YSLGSIISLIAGISARTLMFLPLQLLPFILTIYLLFWKISGSRAIANLVSLIYATTANVE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC YFFFWMHGIGSIFFFIITYFIIKMLRGTTKDSKITIIILIVATSLIYTSYDVTFGMLLFL EEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH ISIIFFILFINKNIVLSKGFFIVLIYMLTVLLGMHGYVYDIFVKQTVYYRVGITGFEKFI HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECHHHHHHHH ASYISQEKSGFPWKDMLIAYPKIISILGLIKYGILLTFIFLGIVYMVKQLKISRNLNSYT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MVFLAILIANIGYLIARLPFGYLSIGSLFLPGIVGLCFIYRHFKDYKRRVSLLLIGVIIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CANSVNYLVLSSEDLINRDLGYYKYVEISAGWYSEYKDDSKIGLTDVLTKSFFWEHICHN HCCCCCEEEECCHHHHHCCCCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHH IIKKGEKLPSIYSYFWSDPAYVLSVVKKGKNDSLKSAYYILNIRLNTLEFDAWVTTKSWQ HHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEEEECCHHH YYLEVIDSDFRLNRIYDSRNIIIIEV HHHHHHCCCCHHHEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA