| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is yeaC [H]
Identifier: 212224982
GI number: 212224982
Start: 1715900
End: 1716820
Strand: Reverse
Name: yeaC [H]
Synonym: TON_1831
Alternate gene names: 212224982
Gene position: 1716820-1715900 (Counterclockwise)
Preceding gene: 212224983
Following gene: 212224981
Centisome position: 92.92
GC content: 55.59
Gene sequence:
>921_bases ATGATACTCGAGAAGATTAAGGCCGAGGTTGGAAAGGCAATAGTCGGAATGGACGATGTGATCGAGCTGATGACGATAGC CATTATAGCCAACGGGCACGTGCTCCTGGAAGGAGTCCCGGGAATAGCGAAAACGACCCTGAGCAAGAACTTCGCACAGA CCCTTGGACTGAAGTTCTCGAGGATACAGATGACGCCAGACATACTGCCGGCAGACATAATCGGCCACACCTTTTACGAC ATGCGAACCGGGGAGTTCAAGATAAGAAAGGGCCCCATCTTTGCCAACGTCGTTCTCGTCGATGAGATAAACCGTGCCTC TCCAAAGACACAGTCAGCTCTCCTCGAGGCGATGGAGGAGCGACAGGTCACCATAGAGGGCCTCCCCCTCAAGCTCCCGG AGCCGTTCATAGTCCTCGCGACGATGAACCCTGTGGAAATGGAGGGCGTCTACGAGCTCCCTACCGCGCAGATTGACAGG TTTATGATGAAGATAGACCTCACTTACCTCCCCGAGGAGAGCGAGAAGGCAATGCTCAGGATGAAGAGCCTGGGGCAGTT CTCGGAAGCAAACCAGGTCGTCCTCGGGAGCGAGCTGGCCAGGGCCAGAAGAGAGGCCATGAGAGTCCACGTGAGTGAGG CAGCAATCGACTATATATACGCCATCGTCAAGGAGACGAGGCTCGACGAGAGGGTGATCCTTGGAGCCTCGCCGAGGGCT GGCGAGCATCTCCTCTACACCGCCAAGGTTAAGGCCTACCTAGAAGGGAGGAGCTACGTCATCCCGGATGACGTTAAATG GCTGGCTATTCCAGTCATCTCCCACAGGATCGTCGTCAAGCCTGAGTACGAGGTGGACGGCATCGACGGGAAGACCATTG TAAGGGAAGTCCTCGAAAGGGTAGAGGTGCCAACGGAATGA
Upstream 100 bases:
>100_bases AGGAAGGAAAGCCCCGAAGAGCTCGCCCTGGCTCTGGCGAGGGAGCGGGGCTGGGATGAAAAGGAGATAATCGAGATGCT CGAAAGGATGGGTGGTTGAT
Downstream 100 bases:
>100_bases AAAGGGCAGGAGTCTTGCTCTCCCTCGCGGCAGTCCTTTCGGCCGCCGCCTACCTGATGGGCAGCCCAGCGGCGGCGCTG ATGGCGGTCGGGATAATGGC
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MILEKIKAEVGKAIVGMDDVIELMTIAIIANGHVLLEGVPGIAKTTLSKNFAQTLGLKFSRIQMTPDILPADIIGHTFYD MRTGEFKIRKGPIFANVVLVDEINRASPKTQSALLEAMEERQVTIEGLPLKLPEPFIVLATMNPVEMEGVYELPTAQIDR FMMKIDLTYLPEESEKAMLRMKSLGQFSEANQVVLGSELARARREAMRVHVSEAAIDYIYAIVKETRLDERVILGASPRA GEHLLYTAKVKAYLEGRSYVIPDDVKWLAIPVISHRIVVKPEYEVDGIDGKTIVREVLERVEVPTE
Sequences:
>Translated_306_residues MILEKIKAEVGKAIVGMDDVIELMTIAIIANGHVLLEGVPGIAKTTLSKNFAQTLGLKFSRIQMTPDILPADIIGHTFYD MRTGEFKIRKGPIFANVVLVDEINRASPKTQSALLEAMEERQVTIEGLPLKLPEPFIVLATMNPVEMEGVYELPTAQIDR FMMKIDLTYLPEESEKAMLRMKSLGQFSEANQVVLGSELARARREAMRVHVSEAAIDYIYAIVKETRLDERVILGASPRA GEHLLYTAKVKAYLEGRSYVIPDDVKWLAIPVISHRIVVKPEYEVDGIDGKTIVREVLERVEVPTE >Mature_306_residues MILEKIKAEVGKAIVGMDDVIELMTIAIIANGHVLLEGVPGIAKTTLSKNFAQTLGLKFSRIQMTPDILPADIIGHTFYD MRTGEFKIRKGPIFANVVLVDEINRASPKTQSALLEAMEERQVTIEGLPLKLPEPFIVLATMNPVEMEGVYELPTAQIDR FMMKIDLTYLPEESEKAMLRMKSLGQFSEANQVVLGSELARARREAMRVHVSEAAIDYIYAIVKETRLDERVILGASPRA GEHLLYTAKVKAYLEGRSYVIPDDVKWLAIPVISHRIVVKPEYEVDGIDGKTIVREVLERVEVPTE
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 34214; Mature: 34214
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILEKIKAEVGKAIVGMDDVIELMTIAIIANGHVLLEGVPGIAKTTLSKNFAQTLGLKFS CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEE RIQMTPDILPADIIGHTFYDMRTGEFKIRKGPIFANVVLVDEINRASPKTQSALLEAMEE EEEECCCCCCHHHHHCHHHCCCCCCEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHH RQVTIEGLPLKLPEPFIVLATMNPVEMEGVYELPTAQIDRFMMKIDLTYLPEESEKAMLR CCEEEECCCEECCCCEEEEEECCCEEECCEEECCHHHHHHHHHEEEEEECCCCHHHHHHH MKSLGQFSEANQVVLGSELARARREAMRVHVSEAAIDYIYAIVKETRLDERVILGASPRA HHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GEHLLYTAKVKAYLEGRSYVIPDDVKWLAIPVISHRIVVKPEYEVDGIDGKTIVREVLER CCEEEEEEEEEEEECCCCEECCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHH VEVPTE CCCCCC >Mature Secondary Structure MILEKIKAEVGKAIVGMDDVIELMTIAIIANGHVLLEGVPGIAKTTLSKNFAQTLGLKFS CCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCEEE RIQMTPDILPADIIGHTFYDMRTGEFKIRKGPIFANVVLVDEINRASPKTQSALLEAMEE EEEECCCCCCHHHHHCHHHCCCCCCEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHH RQVTIEGLPLKLPEPFIVLATMNPVEMEGVYELPTAQIDRFMMKIDLTYLPEESEKAMLR CCEEEECCCEECCCCEEEEEECCCEEECCEEECCHHHHHHHHHEEEEEECCCCHHHHHHH MKSLGQFSEANQVVLGSELARARREAMRVHVSEAAIDYIYAIVKETRLDERVILGASPRA HHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC GEHLLYTAKVKAYLEGRSYVIPDDVKWLAIPVISHRIVVKPEYEVDGIDGKTIVREVLER CCEEEEEEEEEEEECCCCEECCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHH VEVPTE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]