| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224981
Identifier: 212224981
GI number: 212224981
Start: 1714620
End: 1715903
Strand: Reverse
Name: 212224981
Synonym: TON_1830
Alternate gene names: NA
Gene position: 1715903-1714620 (Counterclockwise)
Preceding gene: 212224982
Following gene: 212224980
Centisome position: 92.87
GC content: 57.79
Gene sequence:
>1284_bases ATGAAAAGGGCAGGAGTCTTGCTCTCCCTCGCGGCAGTCCTTTCGGCCGCCGCCTACCTGATGGGCAGCCCAGCGGCGGC GCTGATGGCGGTCGGGATAATGGCCCACTACGCCCTGGCAAGGTTAAGCTTTGAGCCCAGTGTAAGGGTCGAGAGAACCG TTCCGGAGAGAGGAACCGAGAGGGAGCCTGTAAAGGCCAGGATCAAAGTCGAGAATCTCTCCGGGGTTACGGGCGTACTG AGGATAAGGGAAACATCGAAGAGCGTCTTCGCTAGGGAGCTCAGGACCTTCCTGAATCCCGGCGATAAGAAATATCTCGA GCAGACGATAGTTCCCCAGGCTAAGGGCAGGATAGCGATCAAAGCAGAGGCGACTTTCGAGGATGAGCGCGGGCTCTTTA AGAAGGACTTCCCTGTGATAGAACACGGAAAGATGACTATCTTCCCATCACCCAGAAGCATAAAAGAGGCCATGAGGGAG AGGCGCCAGGTCGAGGCCCTGGCCGAGGTCGAGAGGGCCCTTGGAATCGGGGCAGAGACCCTTGACTTCGAGGAGCTCAG GGAGTTCCTTCCAGGGGATGATATAACCAAAATCGACTGGAAGGCCACCTCAAGGCTCAACACGCTTATAGTCAGAGTCT TCAGGAGGGAAAGCCTCGCTGATGTTTACCTGCTCGTCAACGTCGACCGCAAGTTCCGCAGGGAGCTAAAGGCGGGCAAG ATAGACTACCTCGTCCTCATCATAGCACAGCTTTCCGCCTACTTCAGGAGGTTCGGCCACAGCGTGAAGGTTGTAGCCTA TGACGAGGCGGGCATCGTCAGGGTAATAGAGCACGCAAGTGACCCGCTGACACTCGTCTCCGAGCTCGGACTCAGGGGCG AGAAAGGTTTGCCCCCGCTGAAGCCATCCGGCCTGTCGTCCCCATCGACGATAGGGAGACTGGTACTGAAGATGAAGCGC GGCTCCAGCGCCTCGGGTCCCCTCAAAGCGGCAATGGAAGTCAAGAGCGGGGCGTACGTGATAATGGTCGATGACCTCGG CCTCCACCCGAGGGAGATAATCAAAGCAGCGAGGGTGCTCGAGAGAAAAGGCTCAAAGGCCGTCCTCCTGTATCCAAACC CGGTATTCTTCGTCAGCAAAGAGGGGCTGACCGAGAGAGAGCTGGAGACCCTCTACCGCGGCTACCGCGAGAGGAAGGAG GTCATGAGGAAAGTCAGGGGCTGGATAAAGGTCATTGAAGTCGGCCCCCGAGACGTGCTTCCAAGGGTGGTGGGTAGGCT GTGA
Upstream 100 bases:
>100_bases TCTCCCACAGGATCGTCGTCAAGCCTGAGTACGAGGTGGACGGCATCGACGGGAAGACCATTGTAAGGGAAGTCCTCGAA AGGGTAGAGGTGCCAACGGA
Downstream 100 bases:
>100_bases TAGGGCTGATAGCGACCATCCTAACTGGAATAGTGCTCAAAAACTACGTCTTCCTCCTGATCATGCTGGCTTATCTGCTG AGGTTAAGGAGCAGGAATGC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKRAGVLLSLAAVLSAAAYLMGSPAAALMAVGIMAHYALARLSFEPSVRVERTVPERGTEREPVKARIKVENLSGVTGVL RIRETSKSVFARELRTFLNPGDKKYLEQTIVPQAKGRIAIKAEATFEDERGLFKKDFPVIEHGKMTIFPSPRSIKEAMRE RRQVEALAEVERALGIGAETLDFEELREFLPGDDITKIDWKATSRLNTLIVRVFRRESLADVYLLVNVDRKFRRELKAGK IDYLVLIIAQLSAYFRRFGHSVKVVAYDEAGIVRVIEHASDPLTLVSELGLRGEKGLPPLKPSGLSSPSTIGRLVLKMKR GSSASGPLKAAMEVKSGAYVIMVDDLGLHPREIIKAARVLERKGSKAVLLYPNPVFFVSKEGLTERELETLYRGYRERKE VMRKVRGWIKVIEVGPRDVLPRVVGRL
Sequences:
>Translated_427_residues MKRAGVLLSLAAVLSAAAYLMGSPAAALMAVGIMAHYALARLSFEPSVRVERTVPERGTEREPVKARIKVENLSGVTGVL RIRETSKSVFARELRTFLNPGDKKYLEQTIVPQAKGRIAIKAEATFEDERGLFKKDFPVIEHGKMTIFPSPRSIKEAMRE RRQVEALAEVERALGIGAETLDFEELREFLPGDDITKIDWKATSRLNTLIVRVFRRESLADVYLLVNVDRKFRRELKAGK IDYLVLIIAQLSAYFRRFGHSVKVVAYDEAGIVRVIEHASDPLTLVSELGLRGEKGLPPLKPSGLSSPSTIGRLVLKMKR GSSASGPLKAAMEVKSGAYVIMVDDLGLHPREIIKAARVLERKGSKAVLLYPNPVFFVSKEGLTERELETLYRGYRERKE VMRKVRGWIKVIEVGPRDVLPRVVGRL >Mature_427_residues MKRAGVLLSLAAVLSAAAYLMGSPAAALMAVGIMAHYALARLSFEPSVRVERTVPERGTEREPVKARIKVENLSGVTGVL RIRETSKSVFARELRTFLNPGDKKYLEQTIVPQAKGRIAIKAEATFEDERGLFKKDFPVIEHGKMTIFPSPRSIKEAMRE RRQVEALAEVERALGIGAETLDFEELREFLPGDDITKIDWKATSRLNTLIVRVFRRESLADVYLLVNVDRKFRRELKAGK IDYLVLIIAQLSAYFRRFGHSVKVVAYDEAGIVRVIEHASDPLTLVSELGLRGEKGLPPLKPSGLSSPSTIGRLVLKMKR GSSASGPLKAAMEVKSGAYVIMVDDLGLHPREIIKAARVLERKGSKAVLLYPNPVFFVSKEGLTERELETLYRGYRERKE VMRKVRGWIKVIEVGPRDVLPRVVGRL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47726; Mature: 47726
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAGVLLSLAAVLSAAAYLMGSPAAALMAVGIMAHYALARLSFEPSVRVERTVPERGTE CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC REPVKARIKVENLSGVTGVLRIRETSKSVFARELRTFLNPGDKKYLEQTIVPQAKGRIAI CCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE KAEATFEDERGLFKKDFPVIEHGKMTIFPSPRSIKEAMRERRQVEALAEVERALGIGAET EEECCCCCCCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDFEELREFLPGDDITKIDWKATSRLNTLIVRVFRRESLADVYLLVNVDRKFRRELKAGK CCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCC IDYLVLIIAQLSAYFRRFGHSVKVVAYDEAGIVRVIEHASDPLTLVSELGLRGEKGLPPL HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCC KPSGLSSPSTIGRLVLKMKRGSSASGPLKAAMEVKSGAYVIMVDDLGLHPREIIKAARVL CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHH ERKGSKAVLLYPNPVFFVSKEGLTERELETLYRGYRERKEVMRKVRGWIKVIEVGPRDVL HHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH PRVVGRL HHHHCCC >Mature Secondary Structure MKRAGVLLSLAAVLSAAAYLMGSPAAALMAVGIMAHYALARLSFEPSVRVERTVPERGTE CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC REPVKARIKVENLSGVTGVLRIRETSKSVFARELRTFLNPGDKKYLEQTIVPQAKGRIAI CCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE KAEATFEDERGLFKKDFPVIEHGKMTIFPSPRSIKEAMRERRQVEALAEVERALGIGAET EEECCCCCCCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDFEELREFLPGDDITKIDWKATSRLNTLIVRVFRRESLADVYLLVNVDRKFRRELKAGK CCHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCC IDYLVLIIAQLSAYFRRFGHSVKVVAYDEAGIVRVIEHASDPLTLVSELGLRGEKGLPPL HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCC KPSGLSSPSTIGRLVLKMKRGSSASGPLKAAMEVKSGAYVIMVDDLGLHPREIIKAARVL CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHH ERKGSKAVLLYPNPVFFVSKEGLTERELETLYRGYRERKEVMRKVRGWIKVIEVGPRDVL HHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHH PRVVGRL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA