| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224889
Identifier: 212224889
GI number: 212224889
Start: 1604546
End: 1605454
Strand: Reverse
Name: 212224889
Synonym: TON_1738
Alternate gene names: NA
Gene position: 1605454-1604546 (Counterclockwise)
Preceding gene: 212224890
Following gene: 212224883
Centisome position: 86.89
GC content: 49.5
Gene sequence:
>909_bases ATGAGGGTGAAAACCCTCCTTTTCCTTCTCCTTATTGCCCTTGCTGTGATTGCAAGCGGTTGCACGGGCGGAGGAACAAA GGCCAACACCTCAAACAGCCAGGATAAACCGACAGACTCAGGTTCCGGGGAGATCGGCAGTACAACCATTCTCCTGATCG TAACCAATGACGAGATACACAACGCGTATCTAACGGTGAGAGACAACGCCGATATTCTCGTAGTTCCGGAGCAGTACTCG GTTGGACTTGAGATAAAGGGGGACAAGGCATCAATAACGCAGAAAGAATTGTGGGCCTTCTGGATTGAGCCCAACAACGT GGTTCGCGTTGAAAAGCTGGAGTCCAGTGAGGGCTTCACATTCAAGGCTAAGGAAATCCACGGCGACAACCTTGTCTCAG AGACCTTTGGTGTGAAAAAGATTCCAGACGAGTACAGAAAACTGCTGAACGGACTGCCATCTTTTGAATCTCTTGACAAA ATGCCTTCGGACTTTGGAGTGGCAAGGAAGGTCCCGCTTAGCGAGCTCGCAAAGGGAATAACCATAGACGAGGTAATCAA CGGTTATCCAAAACTCAACGATTCAGAAAAGTTCGAGGAGCTCTACAGGGTCTTCACGCTCCAGAGCGGAGGAACAGGCT CAAGCGATACGCTCTACACGGGAGAGGTAATACCCATTCTAAGGGCAAAACTCTGGAACGAGATTGAGCTCCAAGGAGCA TTAAACAATGCCGTCGTTGGTGGTCCTCCGAAGCAACAGAGATTCGCGGTGGTGGCGATTCCAACTAATGTTCTCTCGGG GGACGTGGACATCTCACTTAACTATGACCCCAATACCCAAAAGGGAACAATAAAGGTGACAGGACTTAAAACGACCGACG GCTATGTCATAGTCGTGACACTTGGATAA
Upstream 100 bases:
>100_bases CATAGCGGTAATCGGAATTGCATTAGCCTTTGTTGCATGGTTCACCCTTGAGCCAATAGCCTGGATACTCTGGGGACTCA CTGGGAAGTAAGGTGGAAAT
Downstream 100 bases:
>100_bases TTCGTCCATTCTTTCAATTTTTAGTCTGTCCTCTGCAACCTGCTAAAGGATTATAACTGCACAACCTACCCTTAACTGGT TAAGGGAGGTTGCTACCGTT
Product: DppA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRVKTLLFLLLIALAVIASGCTGGGTKANTSNSQDKPTDSGSGEIGSTTILLIVTNDEIHNAYLTVRDNADILVVPEQYS VGLEIKGDKASITQKELWAFWIEPNNVVRVEKLESSEGFTFKAKEIHGDNLVSETFGVKKIPDEYRKLLNGLPSFESLDK MPSDFGVARKVPLSELAKGITIDEVINGYPKLNDSEKFEELYRVFTLQSGGTGSSDTLYTGEVIPILRAKLWNEIELQGA LNNAVVGGPPKQQRFAVVAIPTNVLSGDVDISLNYDPNTQKGTIKVTGLKTTDGYVIVVTLG
Sequences:
>Translated_302_residues MRVKTLLFLLLIALAVIASGCTGGGTKANTSNSQDKPTDSGSGEIGSTTILLIVTNDEIHNAYLTVRDNADILVVPEQYS VGLEIKGDKASITQKELWAFWIEPNNVVRVEKLESSEGFTFKAKEIHGDNLVSETFGVKKIPDEYRKLLNGLPSFESLDK MPSDFGVARKVPLSELAKGITIDEVINGYPKLNDSEKFEELYRVFTLQSGGTGSSDTLYTGEVIPILRAKLWNEIELQGA LNNAVVGGPPKQQRFAVVAIPTNVLSGDVDISLNYDPNTQKGTIKVTGLKTTDGYVIVVTLG >Mature_302_residues MRVKTLLFLLLIALAVIASGCTGGGTKANTSNSQDKPTDSGSGEIGSTTILLIVTNDEIHNAYLTVRDNADILVVPEQYS VGLEIKGDKASITQKELWAFWIEPNNVVRVEKLESSEGFTFKAKEIHGDNLVSETFGVKKIPDEYRKLLNGLPSFESLDK MPSDFGVARKVPLSELAKGITIDEVINGYPKLNDSEKFEELYRVFTLQSGGTGSSDTLYTGEVIPILRAKLWNEIELQGA LNNAVVGGPPKQQRFAVVAIPTNVLSGDVDISLNYDPNTQKGTIKVTGLKTTDGYVIVVTLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32736; Mature: 32736
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKTLLFLLLIALAVIASGCTGGGTKANTSNSQDKPTDSGSGEIGSTTILLIVTNDEIH CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC NAYLTVRDNADILVVPEQYSVGLEIKGDKASITQKELWAFWIEPNNVVRVEKLESSEGFT EEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCE FKAKEIHGDNLVSETFGVKKIPDEYRKLLNGLPSFESLDKMPSDFGVARKVPLSELAKGI EEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCC TIDEVINGYPKLNDSEKFEELYRVFTLQSGGTGSSDTLYTGEVIPILRAKLWNEIELQGA CHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCEEECCHHHHHHHHHCCEEEEEEC LNNAVVGGPPKQQRFAVVAIPTNVLSGDVDISLNYDPNTQKGTIKVTGLKTTDGYVIVVT CCCCEECCCCCHHCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEEEEEE LG EC >Mature Secondary Structure MRVKTLLFLLLIALAVIASGCTGGGTKANTSNSQDKPTDSGSGEIGSTTILLIVTNDEIH CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC NAYLTVRDNADILVVPEQYSVGLEIKGDKASITQKELWAFWIEPNNVVRVEKLESSEGFT EEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCE FKAKEIHGDNLVSETFGVKKIPDEYRKLLNGLPSFESLDKMPSDFGVARKVPLSELAKGI EEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHCCC TIDEVINGYPKLNDSEKFEELYRVFTLQSGGTGSSDTLYTGEVIPILRAKLWNEIELQGA CHHHHHCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCEEECCHHHHHHHHHCCEEEEEEC LNNAVVGGPPKQQRFAVVAIPTNVLSGDVDISLNYDPNTQKGTIKVTGLKTTDGYVIVVT CCCCEECCCCCHHCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEEEEEE LG EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA