Click here to switch to the map view.

The map label for this gene is ybgI [C]

Identifier: 212224883

GI number: 212224883

Start: 1599285

End: 1600040

Strand: Reverse

Name: ybgI [C]

Synonym: TON_1732

Alternate gene names: 212224883

Gene position: 1600040-1599285 (Counterclockwise)

Preceding gene: 212224889

Following gene: 212224882

Centisome position: 86.6

GC content: 53.17

Gene sequence:

>756_bases
ATGGTCGCGCGAGACGAGATAGTCGCATTTCTCAACGAATACCTCAACATTAATGCCTTCCCTGACAAGTCAAAGAACGG
TCTCCAGGTAGAGGGAAAGGAGGAAGTTGAGAGGATAGCCTTTGCCGTTGACACGACGCTCAGAACGATAAAGAGAGCCG
CCAGGGCCAAAGCTGACATGATGATAGTCCACCACGGCATGATATGGGGTGGCATAGACTACGTGACTGGAGTGACATAC
CGCAGGCTTAAGGCGCTCTTCGATGCTGGCATAAACCTCTACGTCGCCCACGTGCCTTTAGATGCCCACCCTGAGGTCGG
AAACAACGTCCAACTACTCAAACTTCTCGGGCTTGAACCGAAGGAGCCCTTCGGCGAGTACGGAGGGGTCACGATAGGTT
ATATCGGGGAGTTTGAGGAGACAAAGCCGGTGGAGGAAGTGGCACAGGTTCTCGCGGAGAAGCTGGACACGACAGTTAAG
ACCTACGAGTTCGGGGTGAGGGAGATAAGACGCGTTGGAGCCATAACAGGCGCTGGCGGCTTTGCACTGGAGGAAGCAAA
GAGAAAGAACGTTGACCTATTCGTTCTCGGAGAGTTTACACACGCCAACTATTTAACCGCCTTGGATCTTGGGATAAGCG
TCGCGGTTGCCGGCCACTACAAGACAGAAACGCTCGGCGTAAAGGCGCTGATGCCGCTCGTTAAAGAGAAGTTCGACGTT
GAGGTTTTCTTCATCGACGAGCCAACTGGACTTTGA

Upstream 100 bases:

>100_bases
TTTTAAAAGGTTAGCTGGTCGGAGATGTTGCCCGAGATATTCAGTATAGTGAATACGGAGACGTTAAAAGCTCTCGCGGG
GATTAAGTTTGGTGGTCGAA

Downstream 100 bases:

>100_bases
GCCCGCCTGTTTTTTCTCTATTGTAAACACTTACACAAAAGGGTTAATAACGGCAGGAGCAAAATATTCTGGGGTGATAC
CATGAACAAGGCGCTCACAA

Product: NGG1p interacting factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVARDEIVAFLNEYLNINAFPDKSKNGLQVEGKEEVERIAFAVDTTLRTIKRAARAKADMMIVHHGMIWGGIDYVTGVTY
RRLKALFDAGINLYVAHVPLDAHPEVGNNVQLLKLLGLEPKEPFGEYGGVTIGYIGEFEETKPVEEVAQVLAEKLDTTVK
TYEFGVREIRRVGAITGAGGFALEEAKRKNVDLFVLGEFTHANYLTALDLGISVAVAGHYKTETLGVKALMPLVKEKFDV
EVFFIDEPTGL

Sequences:

>Translated_251_residues
MVARDEIVAFLNEYLNINAFPDKSKNGLQVEGKEEVERIAFAVDTTLRTIKRAARAKADMMIVHHGMIWGGIDYVTGVTY
RRLKALFDAGINLYVAHVPLDAHPEVGNNVQLLKLLGLEPKEPFGEYGGVTIGYIGEFEETKPVEEVAQVLAEKLDTTVK
TYEFGVREIRRVGAITGAGGFALEEAKRKNVDLFVLGEFTHANYLTALDLGISVAVAGHYKTETLGVKALMPLVKEKFDV
EVFFIDEPTGL
>Mature_251_residues
MVARDEIVAFLNEYLNINAFPDKSKNGLQVEGKEEVERIAFAVDTTLRTIKRAARAKADMMIVHHGMIWGGIDYVTGVTY
RRLKALFDAGINLYVAHVPLDAHPEVGNNVQLLKLLGLEPKEPFGEYGGVTIGYIGEFEETKPVEEVAQVLAEKLDTTVK
TYEFGVREIRRVGAITGAGGFALEEAKRKNVDLFVLGEFTHANYLTALDLGISVAVAGHYKTETLGVKALMPLVKEKFDV
EVFFIDEPTGL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=254, Percent_Identity=37.7952755905512, Blast_Score=150, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27716; Mature: 27716

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARDEIVAFLNEYLNINAFPDKSKNGLQVEGKEEVERIAFAVDTTLRTIKRAARAKADM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCE
MIVHHGMIWGGIDYVTGVTYRRLKALFDAGINLYVAHVPLDAHPEVGNNVQLLKLLGLEP
EEEECCCEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC
KEPFGEYGGVTIGYIGEFEETKPVEEVAQVLAEKLDTTVKTYEFGVREIRRVGAITGAGG
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FALEEAKRKNVDLFVLGEFTHANYLTALDLGISVAVAGHYKTETLGVKALMPLVKEKFDV
HHHHHHHHCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCE
EVFFIDEPTGL
EEEEECCCCCC
>Mature Secondary Structure
MVARDEIVAFLNEYLNINAFPDKSKNGLQVEGKEEVERIAFAVDTTLRTIKRAARAKADM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCE
MIVHHGMIWGGIDYVTGVTYRRLKALFDAGINLYVAHVPLDAHPEVGNNVQLLKLLGLEP
EEEECCCEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC
KEPFGEYGGVTIGYIGEFEETKPVEEVAQVLAEKLDTTVKTYEFGVREIRRVGAITGAGG
CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FALEEAKRKNVDLFVLGEFTHANYLTALDLGISVAVAGHYKTETLGVKALMPLVKEKFDV
HHHHHHHHCCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCE
EVFFIDEPTGL
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]