| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224812
Identifier: 212224812
GI number: 212224812
Start: 1526073
End: 1526630
Strand: Reverse
Name: 212224812
Synonym: TON_1661
Alternate gene names: NA
Gene position: 1526630-1526073 (Counterclockwise)
Preceding gene: 212224813
Following gene: 212224811
Centisome position: 82.63
GC content: 46.59
Gene sequence:
>558_bases GTGAAAGGCGTTTTGATAATAACAGAACCCGAGAAGGTAAAAGTCCTATCAGAGGAGACACGATTCAAAATCCTCCAATT ACTAAGAGAGCGTCCAATGACAATTATCGAGCTTAGCAGCGCACTTGGAAAGGACAGAACAACCGTCTATCGACACGTGA AGATTCTCGAGAACGCGGGACTCATCAAGGAGCTCGACAATGACGGTAACGAGAGGATATACACCAGGACAGCGAGGCTC TTCCTCATAAAAGCAGACCCTGACGAGGTCATAGAAGAGTTCAGACAGGCCTATCTCCAGGTAGAGGCTGAAAAGCTCAT CCAAATCCTTGAAAAAGCAGGCGCCAAAATAAAAGACCGAGAAAAACTAAAGCATCTCACCAAGACGGTGCTCAACGAAA TTGAACTCAACTCCCAGCCTATACTCAAGAGAATATCCCAAGCCAAAGTGGATCTGACGGAGGTAGAGCTCTTCCACCTT TTCAACATGCTCGTTTTCCTCCAGAGCTGCGAGCTCTGCGAGAAAGCCAAAGAAGTAAAGAAGCTCGTGGAATTCTGA
Upstream 100 bases:
>100_bases GGAGTTCGGCGGAGTTGTTCACAGCATCGATATGGTCGCAGCCGGGAAGAAAATCGTTGAGGAAGGAGAAACCCCTCAAG ACAAGTTGGAGGAGTACTGA
Downstream 100 bases:
>100_bases GGCTTCTTTTTATCATTCCCGATAAAACGTGAAGTTTCATTTTCATCGCCCAGTGGATGAACGATTAGGTTCTCCAATGC ACATTGGCGGCAAAGTTTAA
Product: transcription regulator
Products: NA
Alternate protein names: Transcription Regulator ArsR Family; Transcriptional Regulatory Protein; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulatory Protein ArsR Family
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MKGVLIITEPEKVKVLSEETRFKILQLLRERPMTIIELSSALGKDRTTVYRHVKILENAGLIKELDNDGNERIYTRTARL FLIKADPDEVIEEFRQAYLQVEAEKLIQILEKAGAKIKDREKLKHLTKTVLNEIELNSQPILKRISQAKVDLTEVELFHL FNMLVFLQSCELCEKAKEVKKLVEF
Sequences:
>Translated_185_residues MKGVLIITEPEKVKVLSEETRFKILQLLRERPMTIIELSSALGKDRTTVYRHVKILENAGLIKELDNDGNERIYTRTARL FLIKADPDEVIEEFRQAYLQVEAEKLIQILEKAGAKIKDREKLKHLTKTVLNEIELNSQPILKRISQAKVDLTEVELFHL FNMLVFLQSCELCEKAKEVKKLVEF >Mature_185_residues MKGVLIITEPEKVKVLSEETRFKILQLLRERPMTIIELSSALGKDRTTVYRHVKILENAGLIKELDNDGNERIYTRTARL FLIKADPDEVIEEFRQAYLQVEAEKLIQILEKAGAKIKDREKLKHLTKTVLNEIELNSQPILKRISQAKVDLTEVELFHL FNMLVFLQSCELCEKAKEVKKLVEF
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21518; Mature: 21518
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVLIITEPEKVKVLSEETRFKILQLLRERPMTIIELSSALGKDRTTVYRHVKILENAG CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC LIKELDNDGNERIYTRTARLFLIKADPDEVIEEFRQAYLQVEAEKLIQILEKAGAKIKDR HHHHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EKLKHLTKTVLNEIELNSQPILKRISQAKVDLTEVELFHLFNMLVFLQSCELCEKAKEVK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVEF HHHCC >Mature Secondary Structure MKGVLIITEPEKVKVLSEETRFKILQLLRERPMTIIELSSALGKDRTTVYRHVKILENAG CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC LIKELDNDGNERIYTRTARLFLIKADPDEVIEEFRQAYLQVEAEKLIQILEKAGAKIKDR HHHHHCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EKLKHLTKTVLNEIELNSQPILKRISQAKVDLTEVELFHLFNMLVFLQSCELCEKAKEVK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVEF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA