| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224775
Identifier: 212224775
GI number: 212224775
Start: 1482459
End: 1482971
Strand: Reverse
Name: 212224775
Synonym: TON_1624
Alternate gene names: NA
Gene position: 1482971-1482459 (Counterclockwise)
Preceding gene: 212224776
Following gene: 212224774
Centisome position: 80.26
GC content: 55.75
Gene sequence:
>513_bases ATGTCGCTGTCGTCGCTGCTGTGGGCATTCTGGTATATTCTTCCCGCTTACTTCGCCAATGCATCGCCCGTCCTGGTCGG TGGTGGAAGGCCGATAGACGGCGGCAGGTACTGGAAAGACGGGCGGAGGGTCTTTGGGGATGGTAAAACCTGGCGCGGCT TAATCGGAGGAGTTGCAATTGGAACTGCAGTTGGCGCTCTCCAGTACTTCATTACCCCTGAGTTCTACGGCTCACTTGGG AAGGCTCTTCTTCTTGCGTTCCTGCTGTCATTTGGTGCCCTCTTTGGCGACTTGGTCGGGAGCTTCTTCAAGAGGAGGAT AGATCTTCCGCGTGGCTCTCCGGCGATAGGTCTCGACCAGCTCGGCTTCCTTATTTCAGCGCTGGCTTTTGCTTATCCGG TCAAAACACTCGATTCTGGTCAGATAATCTTCCTCCTCGTCGTCTCGCCCTTCGTTCACTGGGGGGCCAACTACTTCGCC TACAAAATGGGCTGGAAGAGCGTGCCGTGGTGA
Upstream 100 bases:
>100_bases GACGATAAGGAGGTTCTTGAGAGGCTCCTTAAGTGCCTTGAGGGCGAAGAGAAGCGGTAGCTTTAAAACCAGCTGTTGGT AGTCAAATTGGGGTGGAGGA
Downstream 100 bases:
>100_bases TTTTTCTTTACCCACTATCATCCAGCAACCCTTTTTAACTTCCGTTTCCCAACTCCTTCGGTGGTGTAAAGATGAAGGTA AAGGTCAGGTACTTTGCCCG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSLSSLLWAFWYILPAYFANASPVLVGGGRPIDGGRYWKDGRRVFGDGKTWRGLIGGVAIGTAVGALQYFITPEFYGSLG KALLLAFLLSFGALFGDLVGSFFKRRIDLPRGSPAIGLDQLGFLISALAFAYPVKTLDSGQIIFLLVVSPFVHWGANYFA YKMGWKSVPW
Sequences:
>Translated_170_residues MSLSSLLWAFWYILPAYFANASPVLVGGGRPIDGGRYWKDGRRVFGDGKTWRGLIGGVAIGTAVGALQYFITPEFYGSLG KALLLAFLLSFGALFGDLVGSFFKRRIDLPRGSPAIGLDQLGFLISALAFAYPVKTLDSGQIIFLLVVSPFVHWGANYFA YKMGWKSVPW >Mature_169_residues SLSSLLWAFWYILPAYFANASPVLVGGGRPIDGGRYWKDGRRVFGDGKTWRGLIGGVAIGTAVGALQYFITPEFYGSLGK ALLLAFLLSFGALFGDLVGSFFKRRIDLPRGSPAIGLDQLGFLISALAFAYPVKTLDSGQIIFLLVVSPFVHWGANYFAY KMGWKSVPW
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0290 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1624_THEON (B6YUC9)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002308011.1 - GeneID: 7018663 - GenomeReviews: CP000855_GR - KEGG: ton:TON_1624 - HOGENOM: HBG297562 - OMA: GANYFAY - ProtClustDB: PRK04032 - HAMAP: MF_01117 - InterPro: IPR002726
Pfam domain/function: PF01864 DUF46
EC number: NA
Molecular weight: Translated: 18583; Mature: 18452
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1b64e340)-; HASH(0x1c9d7cb8)-; HASH(0x1bc61130)-; HASH(0x1cd54cf8)-; HASH(0x1cb38c6c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSLLWAFWYILPAYFANASPVLVGGGRPIDGGRYWKDGRRVFGDGKTWRGLIGGVAI CCHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCEECCCCCHHHHHHHHHHH GTAVGALQYFITPEFYGSLGKALLLAFLLSFGALFGDLVGSFFKRRIDLPRGSPAIGLDQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LGFLISALAFAYPVKTLDSGQIIFLLVVSPFVHWGANYFAYKMGWKSVPW HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCH >Mature Secondary Structure SLSSLLWAFWYILPAYFANASPVLVGGGRPIDGGRYWKDGRRVFGDGKTWRGLIGGVAI CHHHHHHHHHHHHHHHHCCCCCEEEECCEECCCCCCCCCCCEECCCCCHHHHHHHHHHH GTAVGALQYFITPEFYGSLGKALLLAFLLSFGALFGDLVGSFFKRRIDLPRGSPAIGLDQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LGFLISALAFAYPVKTLDSGQIIFLLVVSPFVHWGANYFAYKMGWKSVPW HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA