| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224707
Identifier: 212224707
GI number: 212224707
Start: 1428248
End: 1428649
Strand: Reverse
Name: 212224707
Synonym: TON_1556
Alternate gene names: NA
Gene position: 1428649-1428248 (Counterclockwise)
Preceding gene: 212224708
Following gene: 212224706
Centisome position: 77.32
GC content: 52.99
Gene sequence:
>402_bases ATGAGGAGGAACAATAAGAAGAGGTTAATCCCACTCGCGCTGGCGCTTGTCCTGACGCTGGTTGGTGCCGCGCTTGCTGT GCCTGTTATTACAGTTAACGTTCAGGAGCTTGGTCAGGGAAGCAAGACGATCACTAGCACTGTCACCACGGCCGATGTCA CCTGGAACCTTAACGCCAACAATCCGGACTACGTAGTCAGTGCAACGGTTACCATAACCACTGATCCCGGAGCTGGAACC CTCTACGTCAAGCTCTACAGCGGCACGACTCTAGTTGCATGGGGCCAGGTTACTCTTGATGGAAGCGGTACTTATACTGT GACATTCACCAACGGAGCCAGCGCTGATGGTGTTCCCCTCAGCAGCTTTGACACTGTTTATGTGGTCTACCAGGGTTCAT GA
Upstream 100 bases:
>100_bases AATATCCTACAGTGAACCAACATGGTTTGTTTTAGAAAACTATTTATATATCTCATTCAACCAAAAGCCACAAGGCTATA GTCAGTAGGGGTGAAGTCCC
Downstream 100 bases:
>100_bases ACTCTCTAGGAGGCTCTGAATGAATGTTAAGCACCGTGATATCCTTTCCATTTTGACTTACCTTCTCCTGTTCTTCGTCA TCCTAGTAGTTGTCCTTAAG
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRRNNKKRLIPLALALVLTLVGAALAVPVITVNVQELGQGSKTITSTVTTADVTWNLNANNPDYVVSATVTITTDPGAGT LYVKLYSGTTLVAWGQVTLDGSGTYTVTFTNGASADGVPLSSFDTVYVVYQGS
Sequences:
>Translated_133_residues MRRNNKKRLIPLALALVLTLVGAALAVPVITVNVQELGQGSKTITSTVTTADVTWNLNANNPDYVVSATVTITTDPGAGT LYVKLYSGTTLVAWGQVTLDGSGTYTVTFTNGASADGVPLSSFDTVYVVYQGS >Mature_133_residues MRRNNKKRLIPLALALVLTLVGAALAVPVITVNVQELGQGSKTITSTVTTADVTWNLNANNPDYVVSATVTITTDPGAGT LYVKLYSGTTLVAWGQVTLDGSGTYTVTFTNGASADGVPLSSFDTVYVVYQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13872; Mature: 13872
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNNKKRLIPLALALVLTLVGAALAVPVITVNVQELGQGSKTITSTVTTADVTWNLNAN CCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEECCC NPDYVVSATVTITTDPGAGTLYVKLYSGTTLVAWGQVTLDGSGTYTVTFTNGASADGVPL CCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCC SSFDTVYVVYQGS CCCCEEEEEEECC >Mature Secondary Structure MRRNNKKRLIPLALALVLTLVGAALAVPVITVNVQELGQGSKTITSTVTTADVTWNLNAN CCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEECCC NPDYVVSATVTITTDPGAGTLYVKLYSGTTLVAWGQVTLDGSGTYTVTFTNGASADGVPL CCCEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCC SSFDTVYVVYQGS CCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA