| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224684
Identifier: 212224684
GI number: 212224684
Start: 1407539
End: 1408015
Strand: Reverse
Name: 212224684
Synonym: TON_1533
Alternate gene names: NA
Gene position: 1408015-1407539 (Counterclockwise)
Preceding gene: 212224685
Following gene: 212224683
Centisome position: 76.21
GC content: 54.51
Gene sequence:
>477_bases ATGGATGAGTCGTGGAAAAAGGACATAGCATGGATCCTAATCGCGTTCATAGCAGTTTTTGCACTCCAATTCGGGCTTAA GATGGCCCTTCACACGGACTCGCCGCTGGTCATAGTGGTGAGCGGCTCCATGGAACCCGTCTTTTACAGGGGGGATGTCG TCCTCCTGAAGGGGATAAGTGAGAACAACATGGATGAAGTTCACGTTGGCGACGTGATCGTCTATAAGCGCCCCGGTTAT GAATACCCGATAATTCACCGCGTCAGGGAGATAAAGGAGGTAAGCCTTGGAGGGAAAACTGAGAAGTGCTTCGTCACATG GGGCGACAACAACTGGGCTCCCGACCCCGATTATCCAACGCCTTACGGGCCGGTCCCTTGCGTTCCAGCTTATGCCGTCG AGGACAAGGCCCTGCTAGTTTTCCCGAAGATAGGCCTCATCCCGCTCGAGATAAGGGAGCGCCTCGGCCTGGGATGA
Upstream 100 bases:
>100_bases GCTATCATATGGATATAACAGGGAAAAGGGTCAGCCTTGAAACATGCACCGCGATAGGTGCCATACCCGCTAGAATAAGC ACTCTGATGGAGGCGCTGAG
Downstream 100 bases:
>100_bases TGTGAGGGTAGGTGGCCGAGAGACCGATGAGGAGCTAATCGGCCCCTGACCATCAAACTTTGCTGGTGCAAAGTTTGATC AAAGTTCGTAGCTCCTTTTA
Product: signal peptidase I
Products: NA
Alternate protein names: Signal Peptidase; Peptidase; Archaean Signal Peptidase; Signal Sequence Peptidase I; Signal Peptidase Subunit
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MDESWKKDIAWILIAFIAVFALQFGLKMALHTDSPLVIVVSGSMEPVFYRGDVVLLKGISENNMDEVHVGDVIVYKRPGY EYPIIHRVREIKEVSLGGKTEKCFVTWGDNNWAPDPDYPTPYGPVPCVPAYAVEDKALLVFPKIGLIPLEIRERLGLG
Sequences:
>Translated_158_residues MDESWKKDIAWILIAFIAVFALQFGLKMALHTDSPLVIVVSGSMEPVFYRGDVVLLKGISENNMDEVHVGDVIVYKRPGY EYPIIHRVREIKEVSLGGKTEKCFVTWGDNNWAPDPDYPTPYGPVPCVPAYAVEDKALLVFPKIGLIPLEIRERLGLG >Mature_158_residues MDESWKKDIAWILIAFIAVFALQFGLKMALHTDSPLVIVVSGSMEPVFYRGDVVLLKGISENNMDEVHVGDVIVYKRPGY EYPIIHRVREIKEVSLGGKTEKCFVTWGDNNWAPDPDYPTPYGPVPCVPAYAVEDKALLVFPKIGLIPLEIRERLGLG
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7657609, Length=91, Percent_Identity=42.8571428571429, Blast_Score=71, Evalue=5e-13, Organism=Homo sapiens, GI15150809, Length=91, Percent_Identity=40.6593406593407, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17510347, Length=97, Percent_Identity=44.3298969072165, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322213, Length=101, Percent_Identity=39.6039603960396, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI21358147, Length=97, Percent_Identity=40.2061855670103, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17716; Mature: 17716
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESWKKDIAWILIAFIAVFALQFGLKMALHTDSPLVIVVSGSMEPVFYRGDVVLLKGIS CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCC ENNMDEVHVGDVIVYKRPGYEYPIIHRVREIKEVSLGGKTEKCFVTWGDNNWAPDPDYPT CCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC PYGPVPCVPAYAVEDKALLVFPKIGLIPLEIRERLGLG CCCCCCCCCCEEECCCEEEEECCCCEEEHHHHHHCCCC >Mature Secondary Structure MDESWKKDIAWILIAFIAVFALQFGLKMALHTDSPLVIVVSGSMEPVFYRGDVVLLKGIS CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCC ENNMDEVHVGDVIVYKRPGYEYPIIHRVREIKEVSLGGKTEKCFVTWGDNNWAPDPDYPT CCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC PYGPVPCVPAYAVEDKALLVFPKIGLIPLEIRERLGLG CCCCCCCCCCEEECCCEEEEECCCCEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA