| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224622
Identifier: 212224622
GI number: 212224622
Start: 1347538
End: 1348290
Strand: Reverse
Name: 212224622
Synonym: TON_1471
Alternate gene names: NA
Gene position: 1348290-1347538 (Counterclockwise)
Preceding gene: 212224624
Following gene: 212224616
Centisome position: 72.97
GC content: 44.89
Gene sequence:
>753_bases ATGCCTATGAAACGGGGACTTGCGGTCTTTCTGGTGTTCCTGTTCCTTCTGCCGCAGGTGGCCACGGTTAACCTCTTCGA GGTTGTGAGCCCTGATGAAACCGTTAGGTCGGTTAGTATAGAATGTTGGAATTGCACCGCTAGCGAGATTTTTGACCTGA CTGGGGATAAAATCATTGTGAGAATTCCATATAACGAGACTCATGACCAGATAATACTTGCAACTAAGGACAGTCTTACG GCGAAACTTTCTCCTGCGTCATCTTTGGATCCTTTTAGGTTGAACAAATACAACTTTAGCCTTATCAAAAACAAGTCTCT TGACATTCTTCCCAGGGACATAACATTTTCTTCTCGGGGGTGGCAGGCTTCGATTACAGCGTACAATGCAATGTTCACGA CAAAAATAAAGGCGTGTTATGAAGAATGCGGAGTCTCCCTTGGTTGTTACGATGAGAGTTACGGCACTCTTGCGGAAGAG AACGAAAGCGTAAGGGGGTACCAGCAACGGGTTCTGATTGATCCTTGCTGGGTCTTTGGTTTATGTCCAGACCCCTGCGA TGACTCTTTTGAATCCAAACTGTTCTGGCGTCACCCAACCATATACAGAATACTCTACGTTGAGAGGCAGAAAACCTTTG GGGTTCTTCTTTTGATTACATTTGTTGTTTTGCTCCTCATTTGGGAATGGAGAAAGCGGAAAGATCCATTATGGCGTGGA AACCTGAAGAAATACAAGAAGGACAGGAAATGA
Upstream 100 bases:
>100_bases CACCTTGAGAAAAATCTGGGCTGGATTTTAAAAAGGTTGGCGAGTTTCGATGACGATTTATGAGCGTAATGTTTAAGTTC TTTCTCCCATATTTTCTTAG
Downstream 100 bases:
>100_bases CATGCTGCAACCTGAGGAAAATCCCTAGCTCAAAAGGTTGGGAGAGTATTCCGATGAGGCTTCCTCTTTGAATGCCATCT TAAGGAGAGGCGGCGTGACA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPMKRGLAVFLVFLFLLPQVATVNLFEVVSPDETVRSVSIECWNCTASEIFDLTGDKIIVRIPYNETHDQIILATKDSLT AKLSPASSLDPFRLNKYNFSLIKNKSLDILPRDITFSSRGWQASITAYNAMFTTKIKACYEECGVSLGCYDESYGTLAEE NESVRGYQQRVLIDPCWVFGLCPDPCDDSFESKLFWRHPTIYRILYVERQKTFGVLLLITFVVLLLIWEWRKRKDPLWRG NLKKYKKDRK
Sequences:
>Translated_250_residues MPMKRGLAVFLVFLFLLPQVATVNLFEVVSPDETVRSVSIECWNCTASEIFDLTGDKIIVRIPYNETHDQIILATKDSLT AKLSPASSLDPFRLNKYNFSLIKNKSLDILPRDITFSSRGWQASITAYNAMFTTKIKACYEECGVSLGCYDESYGTLAEE NESVRGYQQRVLIDPCWVFGLCPDPCDDSFESKLFWRHPTIYRILYVERQKTFGVLLLITFVVLLLIWEWRKRKDPLWRG NLKKYKKDRK >Mature_249_residues PMKRGLAVFLVFLFLLPQVATVNLFEVVSPDETVRSVSIECWNCTASEIFDLTGDKIIVRIPYNETHDQIILATKDSLTA KLSPASSLDPFRLNKYNFSLIKNKSLDILPRDITFSSRGWQASITAYNAMFTTKIKACYEECGVSLGCYDESYGTLAEEN ESVRGYQQRVLIDPCWVFGLCPDPCDDSFESKLFWRHPTIYRILYVERQKTFGVLLLITFVVLLLIWEWRKRKDPLWRGN LKKYKKDRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28979; Mature: 28848
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKRGLAVFLVFLFLLPQVATVNLFEVVSPDETVRSVSIECWNCTASEIFDLTGDKIIV CCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHEEEEEEECCCHHHHHCCCCCEEEE RIPYNETHDQIILATKDSLTAKLSPASSLDPFRLNKYNFSLIKNKSLDILPRDITFSSRG EECCCCCCCEEEEEECCCCEEEECCCCCCCCEEECCEEEEEEECCCCCEEECCEEECCCC WQASITAYNAMFTTKIKACYEECGVSLGCYDESYGTLAEENESVRGYQQRVLIDPCWVFG CEEEEEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHEEEECCCEEEE LCPDPCDDSFESKLFWRHPTIYRILYVERQKTFGVLLLITFVVLLLIWEWRKRKDPLWRG CCCCCCCCCHHCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLKKYKKDRK CHHHHHCCCC >Mature Secondary Structure PMKRGLAVFLVFLFLLPQVATVNLFEVVSPDETVRSVSIECWNCTASEIFDLTGDKIIV CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHEEEEEEECCCHHHHHCCCCCEEEE RIPYNETHDQIILATKDSLTAKLSPASSLDPFRLNKYNFSLIKNKSLDILPRDITFSSRG EECCCCCCCEEEEEECCCCEEEECCCCCCCCEEECCEEEEEEECCCCCEEECCEEECCCC WQASITAYNAMFTTKIKACYEECGVSLGCYDESYGTLAEENESVRGYQQRVLIDPCWVFG CEEEEEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHEEEECCCEEEE LCPDPCDDSFESKLFWRHPTIYRILYVERQKTFGVLLLITFVVLLLIWEWRKRKDPLWRG CCCCCCCCCHHCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLKKYKKDRK CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA