| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224615
Identifier: 212224615
GI number: 212224615
Start: 1341942
End: 1342589
Strand: Reverse
Name: 212224615
Synonym: TON_1464
Alternate gene names: NA
Gene position: 1342589-1341942 (Counterclockwise)
Preceding gene: 212224616
Following gene: 212224614
Centisome position: 72.67
GC content: 50.93
Gene sequence:
>648_bases ATGCCCATATTTGGCGGAAAAGAAAGTGGGGTTTTTGATACTATTGAAAAGCACCTTGAGGTTGTCAACGAGTCCCTCGT TGCCTTTAGGGAGCTTATGGTTGCTTACTTGGATGGAGATCTTGAAAGGGCTAAGGCCTTCGAGAGGGAAGTGGATCAGC TGGAAAGCAAGGCTGACAAGCTCAGGAGGAGCATAGAGACGATGCTCTATGAGGGGGCTTTCCTTCCTGCCAACCGGGGT GACTACGTCAGGCTTTCAGAGCTGGTTGACCAGGTGGCAGACGCTGCCGAAAGCGCTGCCCACACGCTCATCTTGGCTAA GCCGAAAGTTCCGCTTGAGCTCAAGGATGAGCTCATGAAGCTTGTGGATTCCGCCATCGAGACGTACAAGGTTCTTGTCG AGGCTGTCAATGCACTCAACTCCGACGTTGACAGGGCCATAGAACTCGCAAAGGTCGTTGAAGATGCCGAGGAGAAAGCT GACGAAGTTGAGTACGACATTAAGGGCAAGGTTTTTGAAAGTGAGACTGTCACAACCTATGCAAAACTTGTATGGAACCA GATACTGACGAAAATTGGAGACATAGCCGACCGCGCTGAGGACACCTCCGATCAGGTCATGCTCATGGCAATAAAGAGGA GGGGATGA
Upstream 100 bases:
>100_bases CTTGAAGCTCCAAGGAACGAGCTTCTCTGGGCGCTCATTAAGGCCAAGGAGGAGCAAAGTAGATAAACCCACCAATCGAG GTTATTGTGGGGGATGAAAA
Downstream 100 bases:
>100_bases ATGTGGTCAAGGTTTTGGTTGCCGCACCGCTTCACGAGAAGGCAATAGAGGTTTTGAAGAACGCTGGGTTTGAGGTAGTT TGTGAGGAGTATCCAGATGA
Product: phosphate transport system regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPIFGGKESGVFDTIEKHLEVVNESLVAFRELMVAYLDGDLERAKAFEREVDQLESKADKLRRSIETMLYEGAFLPANRG DYVRLSELVDQVADAAESAAHTLILAKPKVPLELKDELMKLVDSAIETYKVLVEAVNALNSDVDRAIELAKVVEDAEEKA DEVEYDIKGKVFESETVTTYAKLVWNQILTKIGDIADRAEDTSDQVMLMAIKRRG
Sequences:
>Translated_215_residues MPIFGGKESGVFDTIEKHLEVVNESLVAFRELMVAYLDGDLERAKAFEREVDQLESKADKLRRSIETMLYEGAFLPANRG DYVRLSELVDQVADAAESAAHTLILAKPKVPLELKDELMKLVDSAIETYKVLVEAVNALNSDVDRAIELAKVVEDAEEKA DEVEYDIKGKVFESETVTTYAKLVWNQILTKIGDIADRAEDTSDQVMLMAIKRRG >Mature_214_residues PIFGGKESGVFDTIEKHLEVVNESLVAFRELMVAYLDGDLERAKAFEREVDQLESKADKLRRSIETMLYEGAFLPANRGD YVRLSELVDQVADAAESAAHTLILAKPKVPLELKDELMKLVDSAIETYKVLVEAVNALNSDVDRAIELAKVVEDAEEKAD EVEYDIKGKVFESETVTTYAKLVWNQILTKIGDIADRAEDTSDQVMLMAIKRRG
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 24069; Mature: 23937
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFGGKESGVFDTIEKHLEVVNESLVAFRELMVAYLDGDLERAKAFEREVDQLESKADK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LRRSIETMLYEGAFLPANRGDYVRLSELVDQVADAAESAAHTLILAKPKVPLELKDELMK HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH LVDSAIETYKVLVEAVNALNSDVDRAIELAKVVEDAEEKADEVEYDIKGKVFESETVTTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHH AKLVWNQILTKIGDIADRAEDTSDQVMLMAIKRRG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure PIFGGKESGVFDTIEKHLEVVNESLVAFRELMVAYLDGDLERAKAFEREVDQLESKADK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LRRSIETMLYEGAFLPANRGDYVRLSELVDQVADAAESAAHTLILAKPKVPLELKDELMK HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH LVDSAIETYKVLVEAVNALNSDVDRAIELAKVVEDAEEKADEVEYDIKGKVFESETVTTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHH AKLVWNQILTKIGDIADRAEDTSDQVMLMAIKRRG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]