Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224391

Identifier: 212224391

GI number: 212224391

Start: 1131041

End: 1132504

Strand: Reverse

Name: 212224391

Synonym: TON_1242

Alternate gene names: NA

Gene position: 1132504-1131041 (Counterclockwise)

Preceding gene: 212224392

Following gene: 212224387

Centisome position: 61.3

GC content: 49.93

Gene sequence:

>1464_bases
ATGTTCGAGGTTGTGAGGATACTCTACCGGGAGCTGCACTACAGACGGCTCAAAAGTAACCCTCAGATAGCAAGCGATCC
CAAAAAGTTCGAGAAGCAGCTTAAAACCAGCGGGGACATAATCCGGGGCATTCTTTTCCAGTCCATTGCGTTCCTCTTCT
TTGGTTTCATGATGGCGATGGCCATAAAATCAACCGGAGACAAAACCAAGGCAGTTATAATGTTCTCAACATACGCAATG
CTTCCCTTTGTGATGGCTCTCTACACAACTGCAGTCAACGCTTCCTACACTACCTCTATGGGAATTTTTGAGCCGTTGAA
GCCGCTCCCAATAAAAACCGGGGCCAAATATCTCAGCCTGCTTCTCATGATTGACAACGTTCCGGCCCTGGTCGCCATGC
TTCCGTCAGTCGGGGTTTTGGCTCTCAACTACGGCCTCACAGGCATCCTGGGTCTCCTCTGGATAACCATTGGTGCGTTC
CTCGGCCACGTTCTGGGCCTGGTGATATTCAGATTCTTCGGCTCCGCCAGTGTCGACGGAAGGTTCTCAAGCCTGAAGAC
CCTTGCGAGAACGATGGGGGTACTGCTATTCATCAGCATGTTTTACGCCCTCAACTACATCCAGGCCTACGTTTCTGAAC
ACTATAAGGAGCTTATCCCGGTTTTTTCGCGCTATTCCATAGCATACCCGTTCTCTGTGACGTCAATACTCGAACCCATT
ATCTCGGTTTTAATACTGCTCGGCTACATTGCCATCCTTGCTCCCTTATACCTGGTAGTTATTCGTAGGCTGTGGGAAAG
GATGGGTGAGAACCTCAAGACCTCTCGCACTGTCGTTTCCAAGTTCAGGGCCAAAATCCTGTCCCCGGTGCTGGCGCTAA
CAATGAAGGACCTCAGGATAATTTTCAGGAAGAGCTCCCTGTTCGTTGGGCTTTTACTTCCCCTCTTTATTGTCCTTCCG
ACAGCCATCAGTGTACTGAGTTCGAGAAAGGTCAGTGAATGGGCCGTTGTTTCGGTTCTCTTCATGATAGCATGGATGGC
CTCCGTCGGAATTGACACTGTTCTCAAAATAGACGGCTTGGAGTTCGAGTTCCTAAGAAGCCTGCCGATAACCCTTGGTC
AGTTCGTGAGGGGGAAGCTGATAACTATGAACGCAGTTCCAATATCCGCTGGAGTAGTCCTCGTGCTCGTTGCTTCCTAT
CTCAACCCCTACCTCCTGAAACTAGTTCCCGCTGCAATAGTTCTGCCTCTTCTGACGTCATCACTGGCGATGACCTTCTT
CTATCACGGGGAAAAAGAGCTATCCCTCCCGGAGACGAACTTTGGGCATGTCATAGCCCTGATGATACTCAACGGAATAA
CCCTCGGAATCGTTGCAGGAGTCTGGTTCCTCCTAGGCTATCCCTACGCCATGGGGCTTTCTATTTTAGGAGTTTTTGTT
TTCCTGAAAGCGGTTAGCAGGTGA

Upstream 100 bases:

>100_bases
ATGAGGAGAGCTTGGAGGATGTCTTCCTCAAACTGACCGAGAGCCAGGACGAGATTTTTGCCGTAGTTCAGGCACTGAAG
GAGAGGCTTTAGGTGGGAGC

Downstream 100 bases:

>100_bases
CGTGGAATATCCCAAGGACTCTTTTCTCCTTTCTTAGCTTCTCGAAGAGCTCGGCCGCCTCTGGCGTTGGTATTTCGATG
ATTTCTTTGTCCTTGACCAG

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM
LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF
LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI
ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP
TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY
LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV
FLKAVSR

Sequences:

>Translated_487_residues
MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM
LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF
LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI
ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP
TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY
LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV
FLKAVSR
>Mature_487_residues
MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM
LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF
LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI
ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP
TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY
LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV
FLKAVSR

Specific function: Unknown

COG id: COG3368

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53975; Mature: 53975

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCC
>Mature Secondary Structure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HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA