| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224391
Identifier: 212224391
GI number: 212224391
Start: 1131041
End: 1132504
Strand: Reverse
Name: 212224391
Synonym: TON_1242
Alternate gene names: NA
Gene position: 1132504-1131041 (Counterclockwise)
Preceding gene: 212224392
Following gene: 212224387
Centisome position: 61.3
GC content: 49.93
Gene sequence:
>1464_bases ATGTTCGAGGTTGTGAGGATACTCTACCGGGAGCTGCACTACAGACGGCTCAAAAGTAACCCTCAGATAGCAAGCGATCC CAAAAAGTTCGAGAAGCAGCTTAAAACCAGCGGGGACATAATCCGGGGCATTCTTTTCCAGTCCATTGCGTTCCTCTTCT TTGGTTTCATGATGGCGATGGCCATAAAATCAACCGGAGACAAAACCAAGGCAGTTATAATGTTCTCAACATACGCAATG CTTCCCTTTGTGATGGCTCTCTACACAACTGCAGTCAACGCTTCCTACACTACCTCTATGGGAATTTTTGAGCCGTTGAA GCCGCTCCCAATAAAAACCGGGGCCAAATATCTCAGCCTGCTTCTCATGATTGACAACGTTCCGGCCCTGGTCGCCATGC TTCCGTCAGTCGGGGTTTTGGCTCTCAACTACGGCCTCACAGGCATCCTGGGTCTCCTCTGGATAACCATTGGTGCGTTC CTCGGCCACGTTCTGGGCCTGGTGATATTCAGATTCTTCGGCTCCGCCAGTGTCGACGGAAGGTTCTCAAGCCTGAAGAC CCTTGCGAGAACGATGGGGGTACTGCTATTCATCAGCATGTTTTACGCCCTCAACTACATCCAGGCCTACGTTTCTGAAC ACTATAAGGAGCTTATCCCGGTTTTTTCGCGCTATTCCATAGCATACCCGTTCTCTGTGACGTCAATACTCGAACCCATT ATCTCGGTTTTAATACTGCTCGGCTACATTGCCATCCTTGCTCCCTTATACCTGGTAGTTATTCGTAGGCTGTGGGAAAG GATGGGTGAGAACCTCAAGACCTCTCGCACTGTCGTTTCCAAGTTCAGGGCCAAAATCCTGTCCCCGGTGCTGGCGCTAA CAATGAAGGACCTCAGGATAATTTTCAGGAAGAGCTCCCTGTTCGTTGGGCTTTTACTTCCCCTCTTTATTGTCCTTCCG ACAGCCATCAGTGTACTGAGTTCGAGAAAGGTCAGTGAATGGGCCGTTGTTTCGGTTCTCTTCATGATAGCATGGATGGC CTCCGTCGGAATTGACACTGTTCTCAAAATAGACGGCTTGGAGTTCGAGTTCCTAAGAAGCCTGCCGATAACCCTTGGTC AGTTCGTGAGGGGGAAGCTGATAACTATGAACGCAGTTCCAATATCCGCTGGAGTAGTCCTCGTGCTCGTTGCTTCCTAT CTCAACCCCTACCTCCTGAAACTAGTTCCCGCTGCAATAGTTCTGCCTCTTCTGACGTCATCACTGGCGATGACCTTCTT CTATCACGGGGAAAAAGAGCTATCCCTCCCGGAGACGAACTTTGGGCATGTCATAGCCCTGATGATACTCAACGGAATAA CCCTCGGAATCGTTGCAGGAGTCTGGTTCCTCCTAGGCTATCCCTACGCCATGGGGCTTTCTATTTTAGGAGTTTTTGTT TTCCTGAAAGCGGTTAGCAGGTGA
Upstream 100 bases:
>100_bases ATGAGGAGAGCTTGGAGGATGTCTTCCTCAAACTGACCGAGAGCCAGGACGAGATTTTTGCCGTAGTTCAGGCACTGAAG GAGAGGCTTTAGGTGGGAGC
Downstream 100 bases:
>100_bases CGTGGAATATCCCAAGGACTCTTTTCTCCTTTCTTAGCTTCTCGAAGAGCTCGGCCGCCTCTGGCGTTGGTATTTCGATG ATTTCTTTGTCCTTGACCAG
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV FLKAVSR
Sequences:
>Translated_487_residues MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV FLKAVSR >Mature_487_residues MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAMAIKSTGDKTKAVIMFSTYAM LPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSLLLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAF LGHVLGLVIFRFFGSASVDGRFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRIIFRKSSLFVGLLLPLFIVLP TAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGLEFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASY LNPYLLKLVPAAIVLPLLTSSLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV FLKAVSR
Specific function: Unknown
COG id: COG3368
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53975; Mature: 53975
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAM CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKSTGDKTKAVIMFSTYAMLPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSL HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHH LLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAFLGHVLGLVIFRFFGSASVDG HHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHH ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFRKSSLFVGLLLPLFIVLPTAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHEEECCC EFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASYLNPYLLKLVPAAIVLPLLTS HHHHHHHCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH FLKAVSR HHHHHCC >Mature Secondary Structure MFEVVRILYRELHYRRLKSNPQIASDPKKFEKQLKTSGDIIRGILFQSIAFLFFGFMMAM CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKSTGDKTKAVIMFSTYAMLPFVMALYTTAVNASYTTSMGIFEPLKPLPIKTGAKYLSL HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCHHHHHHH LLMIDNVPALVAMLPSVGVLALNYGLTGILGLLWITIGAFLGHVLGLVIFRFFGSASVDG HHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RFSSLKTLARTMGVLLFISMFYALNYIQAYVSEHYKELIPVFSRYSIAYPFSVTSILEPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHH ISVLILLGYIAILAPLYLVVIRRLWERMGENLKTSRTVVSKFRAKILSPVLALTMKDLRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFRKSSLFVGLLLPLFIVLPTAISVLSSRKVSEWAVVSVLFMIAWMASVGIDTVLKIDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHEEECCC EFEFLRSLPITLGQFVRGKLITMNAVPISAGVVLVLVASYLNPYLLKLVPAAIVLPLLTS HHHHHHHCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAMTFFYHGEKELSLPETNFGHVIALMILNGITLGIVAGVWFLLGYPYAMGLSILGVFV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH FLKAVSR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA