| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224326
Identifier: 212224326
GI number: 212224326
Start: 1073418
End: 1075340
Strand: Reverse
Name: 212224326
Synonym: TON_1177
Alternate gene names: NA
Gene position: 1075340-1073418 (Counterclockwise)
Preceding gene: 212224327
Following gene: 212224325
Centisome position: 58.2
GC content: 50.34
Gene sequence:
>1923_bases ATGGCTATTGCTGCGGTGATGATCCTCCTTTTTCCACTGATAGGGAGAGTAGGTGCTTCCTCCTTCACAGGCTGGATGAG TGTTCCCGGTGTTATAACTCTCGAGGACACCATCATAGAGCTGAGGGACGTCTCCTTTGATGACGGTTCGCTGATGGTGG TTCTGCTGAATGGTAGCACGTCAAATACTTTCATTGTTAAACTTGGGGAGAGTCTCACCTTTGGCCAGACTAGTCTCACG TATTTCCGTGTCCTTGCAAACAGTGAGTCGCTTGTGCTCATCAAAGTTAACTTCTCCCATGTTTTCCCGGGCCAGAACGT CACCTTTGTAGACTACACGATCTCAGTACTGTCCGTAGACAGCTCGGGAGCAAAGCTGAGGGTGAGTAAAGGCAACGAGT CGAAGGAGTTCACATCCTCTGACTTCACCTTTGGAGATATCCGCGTTAAGGTGTCTGCGTACCCCAAGATTTTTGAGGGA TACCTGAAGCGGGGTCAGGACGTCAGTGCTTATGGCCATATCCTAACGTTCTCAAACGCCACCGTTGAGAACACAACCGG TGGATTCATTGAGACTGTTTTTTTCACCTATAAAAACAATACATATCCCATTGAGGTTGGAAAAGAGGCTAATGTAGGGG TCTTCCACGTTAAAGTTGAGGAACTCGTGGGTGTTGATTATGTGAAGGTCGTGGTTAACTTCATCGGTGCCTCTATTGAC GTTGAAACGGTTCCTGATTTGACATTCATGCTTTCCCCAGGTCAGACCCAGAAAGTCGGGCCCTACATAATCAGCTACGA CTATTACTTCGGTGGCGCCACTGTGTCACTCCGCAACTCATGTGGTGAAGTACTAAGAAGTGCCAAGCTTTCGGCAGATC CGATCTCAGCTCTCCTCTATTATGGTGGCGCCGCCGTGGGCCTTGAGAGTATAGCCAGCAACGGAACCGCGACTTTCTTT GCCATGGTGGATGAGACCAAGATACCTAGCGTGGACAAGGTTGCGAACCTGTTGATAAGCGTCTCCTCTGATGGCGGCAA GCAGTACGTCCCCATGACTGCAATGGTGACAGTTCAGAACACTGGTACCGTGGATCTCTCAAACGTTTCCCTGAAATTTG TCCCAGAGGGTGACGTCGAGATACTATCGGGGGAAGAATTGTTCCTTCAGAGGATCAGACCCAGTGAGAAAAAGACCTTT GAGGTCAAACTTCTCCCCCATCGCTCCGGCAGCCTCACCCTGGGACACGTTGAGGCTGAAGCAGTTGCCCCTTCCGAATT GGCTTGTGGGGGATACACAGTTCTGAATTTCCGCTCAAACGATCTCCAGGTTAGTATCGAACCGTCCAACATTTCGTATG AGCTGAGCGTTGAGGCCCCCAACCAGGTTCCTATATACCACCCTGCCCTAATTATGGTTACAGTTACCAACACGGGGGAC GTTTCGGTTCCTGCAAACCTCACAGTAGCTCTGCCTCAGGGTGTTGCCGTTGGGCTAGATGATGCGTTCTCTTCTAGGGG AGACATTATGATCGCCCCCCTCTCCCTCCTTTCGGGCGAGAACGTTACCCTCAGCTTGAAGGCAATCCCGTACACCGAGG GGACAAAGGAATTCATCTTTCGGATTGAGACCCCATTTGGGATCATGGACTCAACAGTTCTTAATCTCGATGTAACTGTT TCCCAGGGAAACGAGACCACAGCTACTGTAATCGAAACCACTGCAGTTCCTTCCAATGGCACTGTGACTGTAACAGAGAC GTACACCACGACGGAAACCCAGACTTTTGAGACTACTGTTACCAACGTTCAGACCGTTCCTTACACCCCGACGTCTGCAA AGGCTATGTGGGGTGTCTTGGGCTTTGTCCTGGGTGCCCTTGTCATCATAGCCCTTGCTTGGTACCAAGCCAAGAAAGTC TGA
Upstream 100 bases:
>100_bases TCGGCCAGACCCTTATGGCGAGGATGATGGGGATAAGCTCTGGTGGGGAAACTGCCCAGATCGCCTTTCACCTCTTGGGG GTGATACCGTGAGGAAGTTT
Downstream 100 bases:
>100_bases AGAGGAAGGGCAAGGTTGATACGCCCTTTCTCATATTTTCTCTCCGGTGATGTTGATGGAGGATGCTGATGTTCTTTGGT ATCATACGGTGGAGAAACTT
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLT YFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEG YLKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFF AMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTF EVKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTV SQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV
Sequences:
>Translated_640_residues MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLT YFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEG YLKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFF AMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTF EVKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTV SQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV >Mature_639_residues AIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLTY FRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGY LKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASIDV ETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFFA MVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFE VKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGDV SVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTVS QGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68655; Mature: 68524
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGST CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHEEEEEEECCCCCCCEEEEEEECCC SNTFIVKLGESLTFGQTSLTYFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVD CCEEEEEECCCEECCCCCEEEEEEEECCCCEEEEEEECEEECCCCCEEEEEEEEEEEEEC SSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGYLKRGQDVSAYGHILTFSNA CCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCC TVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID EEECCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEE VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLY EECCCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHH YGGAAVGLESIASNGTATFFAMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQN HCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEEEC TGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFEVKLLPHRSGSLTLGHVEAE CCEEEEECEEEEEECCCCEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEC AVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD CCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCEEEEEEEECCCC VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIF EECCCEEEEEECCCEEEECCHHHCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCCCEEEE RIETPFGIMDSTVLNLDVTVSQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTV EEECCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEE TNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGST HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHEEEEEEECCCCCCCEEEEEEECCC SNTFIVKLGESLTFGQTSLTYFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVD CCEEEEEECCCEECCCCCEEEEEEEECCCCEEEEEEECEEECCCCCEEEEEEEEEEEEEC SSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGYLKRGQDVSAYGHILTFSNA CCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCC TVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID EEECCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEE VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLY EECCCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHH YGGAAVGLESIASNGTATFFAMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQN HCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEEEC TGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFEVKLLPHRSGSLTLGHVEAE CCEEEEECEEEEEECCCCEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEC AVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD CCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCEEEEEEEECCCC VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIF EECCCEEEEEECCCEEEECCHHHCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCCCEEEE RIETPFGIMDSTVLNLDVTVSQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTV EEECCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEE TNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA