Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224326

Identifier: 212224326

GI number: 212224326

Start: 1073418

End: 1075340

Strand: Reverse

Name: 212224326

Synonym: TON_1177

Alternate gene names: NA

Gene position: 1075340-1073418 (Counterclockwise)

Preceding gene: 212224327

Following gene: 212224325

Centisome position: 58.2

GC content: 50.34

Gene sequence:

>1923_bases
ATGGCTATTGCTGCGGTGATGATCCTCCTTTTTCCACTGATAGGGAGAGTAGGTGCTTCCTCCTTCACAGGCTGGATGAG
TGTTCCCGGTGTTATAACTCTCGAGGACACCATCATAGAGCTGAGGGACGTCTCCTTTGATGACGGTTCGCTGATGGTGG
TTCTGCTGAATGGTAGCACGTCAAATACTTTCATTGTTAAACTTGGGGAGAGTCTCACCTTTGGCCAGACTAGTCTCACG
TATTTCCGTGTCCTTGCAAACAGTGAGTCGCTTGTGCTCATCAAAGTTAACTTCTCCCATGTTTTCCCGGGCCAGAACGT
CACCTTTGTAGACTACACGATCTCAGTACTGTCCGTAGACAGCTCGGGAGCAAAGCTGAGGGTGAGTAAAGGCAACGAGT
CGAAGGAGTTCACATCCTCTGACTTCACCTTTGGAGATATCCGCGTTAAGGTGTCTGCGTACCCCAAGATTTTTGAGGGA
TACCTGAAGCGGGGTCAGGACGTCAGTGCTTATGGCCATATCCTAACGTTCTCAAACGCCACCGTTGAGAACACAACCGG
TGGATTCATTGAGACTGTTTTTTTCACCTATAAAAACAATACATATCCCATTGAGGTTGGAAAAGAGGCTAATGTAGGGG
TCTTCCACGTTAAAGTTGAGGAACTCGTGGGTGTTGATTATGTGAAGGTCGTGGTTAACTTCATCGGTGCCTCTATTGAC
GTTGAAACGGTTCCTGATTTGACATTCATGCTTTCCCCAGGTCAGACCCAGAAAGTCGGGCCCTACATAATCAGCTACGA
CTATTACTTCGGTGGCGCCACTGTGTCACTCCGCAACTCATGTGGTGAAGTACTAAGAAGTGCCAAGCTTTCGGCAGATC
CGATCTCAGCTCTCCTCTATTATGGTGGCGCCGCCGTGGGCCTTGAGAGTATAGCCAGCAACGGAACCGCGACTTTCTTT
GCCATGGTGGATGAGACCAAGATACCTAGCGTGGACAAGGTTGCGAACCTGTTGATAAGCGTCTCCTCTGATGGCGGCAA
GCAGTACGTCCCCATGACTGCAATGGTGACAGTTCAGAACACTGGTACCGTGGATCTCTCAAACGTTTCCCTGAAATTTG
TCCCAGAGGGTGACGTCGAGATACTATCGGGGGAAGAATTGTTCCTTCAGAGGATCAGACCCAGTGAGAAAAAGACCTTT
GAGGTCAAACTTCTCCCCCATCGCTCCGGCAGCCTCACCCTGGGACACGTTGAGGCTGAAGCAGTTGCCCCTTCCGAATT
GGCTTGTGGGGGATACACAGTTCTGAATTTCCGCTCAAACGATCTCCAGGTTAGTATCGAACCGTCCAACATTTCGTATG
AGCTGAGCGTTGAGGCCCCCAACCAGGTTCCTATATACCACCCTGCCCTAATTATGGTTACAGTTACCAACACGGGGGAC
GTTTCGGTTCCTGCAAACCTCACAGTAGCTCTGCCTCAGGGTGTTGCCGTTGGGCTAGATGATGCGTTCTCTTCTAGGGG
AGACATTATGATCGCCCCCCTCTCCCTCCTTTCGGGCGAGAACGTTACCCTCAGCTTGAAGGCAATCCCGTACACCGAGG
GGACAAAGGAATTCATCTTTCGGATTGAGACCCCATTTGGGATCATGGACTCAACAGTTCTTAATCTCGATGTAACTGTT
TCCCAGGGAAACGAGACCACAGCTACTGTAATCGAAACCACTGCAGTTCCTTCCAATGGCACTGTGACTGTAACAGAGAC
GTACACCACGACGGAAACCCAGACTTTTGAGACTACTGTTACCAACGTTCAGACCGTTCCTTACACCCCGACGTCTGCAA
AGGCTATGTGGGGTGTCTTGGGCTTTGTCCTGGGTGCCCTTGTCATCATAGCCCTTGCTTGGTACCAAGCCAAGAAAGTC
TGA

Upstream 100 bases:

>100_bases
TCGGCCAGACCCTTATGGCGAGGATGATGGGGATAAGCTCTGGTGGGGAAACTGCCCAGATCGCCTTTCACCTCTTGGGG
GTGATACCGTGAGGAAGTTT

Downstream 100 bases:

>100_bases
AGAGGAAGGGCAAGGTTGATACGCCCTTTCTCATATTTTCTCTCCGGTGATGTTGATGGAGGATGCTGATGTTCTTTGGT
ATCATACGGTGGAGAAACTT

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLT
YFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEG
YLKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID
VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFF
AMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTF
EVKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD
VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTV
SQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV

Sequences:

>Translated_640_residues
MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLT
YFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEG
YLKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID
VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFF
AMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTF
EVKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD
VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTV
SQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV
>Mature_639_residues
AIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGSTSNTFIVKLGESLTFGQTSLTY
FRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVDSSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGY
LKRGQDVSAYGHILTFSNATVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASIDV
ETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLYYGGAAVGLESIASNGTATFFA
MVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQNTGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFE
VKLLPHRSGSLTLGHVEAEAVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGDV
SVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIFRIETPFGIMDSTVLNLDVTVS
QGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTVTNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68655; Mature: 68524

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGST
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHEEEEEEECCCCCCCEEEEEEECCC
SNTFIVKLGESLTFGQTSLTYFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVD
CCEEEEEECCCEECCCCCEEEEEEEECCCCEEEEEEECEEECCCCCEEEEEEEEEEEEEC
SSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGYLKRGQDVSAYGHILTFSNA
CCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCC
TVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID
EEECCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEE
VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLY
EECCCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHH
YGGAAVGLESIASNGTATFFAMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQN
HCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEEEC
TGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFEVKLLPHRSGSLTLGHVEAE
CCEEEEECEEEEEECCCCEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEC
AVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD
CCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCEEEEEEEECCCC
VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIF
EECCCEEEEEECCCEEEECCHHHCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCCCEEEE
RIETPFGIMDSTVLNLDVTVSQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTV
EEECCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEE
TNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIAAVMILLFPLIGRVGASSFTGWMSVPGVITLEDTIIELRDVSFDDGSLMVVLLNGST
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHEEEEEEECCCCCCCEEEEEEECCC
SNTFIVKLGESLTFGQTSLTYFRVLANSESLVLIKVNFSHVFPGQNVTFVDYTISVLSVD
CCEEEEEECCCEECCCCCEEEEEEEECCCCEEEEEEECEEECCCCCEEEEEEEEEEEEEC
SSGAKLRVSKGNESKEFTSSDFTFGDIRVKVSAYPKIFEGYLKRGQDVSAYGHILTFSNA
CCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEECCC
TVENTTGGFIETVFFTYKNNTYPIEVGKEANVGVFHVKVEELVGVDYVKVVVNFIGASID
EEECCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCEE
VETVPDLTFMLSPGQTQKVGPYIISYDYYFGGATVSLRNSCGEVLRSAKLSADPISALLY
EECCCCEEEEECCCCCCCCCCEEEEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHH
YGGAAVGLESIASNGTATFFAMVDETKIPSVDKVANLLISVSSDGGKQYVPMTAMVTVQN
HCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEEEEEECCCCCEEEEEEEEEEEEC
TGTVDLSNVSLKFVPEGDVEILSGEELFLQRIRPSEKKTFEVKLLPHRSGSLTLGHVEAE
CCEEEEECEEEEEECCCCEEEECCHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEEC
AVAPSELACGGYTVLNFRSNDLQVSIEPSNISYELSVEAPNQVPIYHPALIMVTVTNTGD
CCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCEEEEEEEECCCC
VSVPANLTVALPQGVAVGLDDAFSSRGDIMIAPLSLLSGENVTLSLKAIPYTEGTKEFIF
EECCCEEEEEECCCEEEECCHHHCCCCCEEEEEHHHHCCCCEEEEEEEECCCCCCCEEEE
RIETPFGIMDSTVLNLDVTVSQGNETTATVIETTAVPSNGTVTVTETYTTTETQTFETTV
EEECCCCCCCCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEE
TNVQTVPYTPTSAKAMWGVLGFVLGALVIIALAWYQAKKV
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA