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The map label for this gene is rplX [H]

Identifier: 212224255

GI number: 212224255

Start: 1024192

End: 1024425

Strand: Reverse

Name: rplX [H]

Synonym: TON_1106

Alternate gene names: 212224255

Gene position: 1024425-1024192 (Counterclockwise)

Preceding gene: 212224256

Following gene: 212224253

Centisome position: 55.45

GC content: 52.99

Gene sequence:

>234_bases
ATGGAGGTTAAGGTCTTCCGCGTTAAGGGCGTCTTTGAGAGGCTCGGAAAGAAGCAGCCGTTCACCAAGGAATACAGGGC
TCTCAAGCAGGAGCACGTCAAGGAGCTCGTTTACTCTGAGATAGGTAGCAAGCACAGGGTTCCGAGAACCAAGATATGGA
TCGAGAGCATCGAAGAGATAAAGCCGGAAGAGGCTGAAGACCCCATCGTCAGGAAGCTCAGCCTCGAGCTCTGA

Upstream 100 bases:

>100_bases
GCGAACTCTCACGGTGTCGTTGTCGGACACCTCACCACTGGACCCGAGATTGTGAAGATTGAAGAGGCGTTAGGATTCCT
TGACTGAGGAGGTGTGAGGA

Downstream 100 bases:

>100_bases
TTTCTTTTCTACTTCTCCCTCCAGCCGAGAACCCTTGACTGGTAGTGCCTTTTTGGAAATATCTCCAGGGGGTCGATCCC
CTTCTCGCGGAGCATATGTC

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MEVKVFRVKGVFERLGKKQPFTKEYRALKQEHVKELVYSEIGSKHRVPRTKIWIESIEEIKPEEAEDPIVRKLSLEL

Sequences:

>Translated_77_residues
MEVKVFRVKGVFERLGKKQPFTKEYRALKQEHVKELVYSEIGSKHRVPRTKIWIESIEEIKPEEAEDPIVRKLSLEL
>Mature_77_residues
MEVKVFRVKGVFERLGKKQPFTKEYRALKQEHVKELVYSEIGSKHRVPRTKIWIESIEEIKPEEAEDPIVRKLSLEL

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302 [H]

Pfam domain/function: PF01775 Ribosomal_L18ae [H]

EC number: NA

Molecular weight: Translated: 9178; Mature: 9178

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKVFRVKGVFERLGKKQPFTKEYRALKQEHVKELVYSEIGSKHRVPRTKIWIESIEEI
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
KPEEAEDPIVRKLSLEL
CCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MEVKVFRVKGVFERLGKKQPFTKEYRALKQEHVKELVYSEIGSKHRVPRTKIWIESIEEI
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
KPEEAEDPIVRKLSLEL
CCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA