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The map label for this gene is ybgL [C]

Identifier: 212224200

GI number: 212224200

Start: 971488

End: 972255

Strand: Reverse

Name: ybgL [C]

Synonym: TON_1051

Alternate gene names: 212224200

Gene position: 972255-971488 (Counterclockwise)

Preceding gene: 212224202

Following gene: 212224199

Centisome position: 52.62

GC content: 54.82

Gene sequence:

>768_bases
GTGAAGGTTGACCTGAACTCGGACCTGGGTGAGAGCTTCGGCCGCTATAAACTTGGTCTCGATGAGGAAGTCATGAAATA
CATTACCAGCGCTAACGTTGCCACTGGCTGGCATGCGGGAGACCCGCTCGTCATGAGGAAGACTGTCAGACTTGCGAAGG
AGAAGGGTGTTGCCGTTGGAGCGCATCCGGGTTATCCAGATTTGCTTGGCTTCGGGAGGAGATACATGAAGCTGACTCCT
GAAGAGGCGAGGAACTACATTCTCTACCAGATAGGTGCGCTTCACGCCTTCACAAAGGCTGAGGGGATGGAACTCCAGCA
CGTCAAGCCCCACGGTGCCCTTTACAATGCCCTCGTGAAGGATGAAGAGCTCGCAAGGGCCGTGATTGAGGGAATCACCG
ACTTCGACAGAAGGATTATTTTCGTGATGCTCTCCGGCTCAAGACCGGCAGAGATTGCCGAGGAGATGGGACTAAAGGTT
GCCCATGAGGTCTTCGCCGACAGAGCCTATAACCCGGACGGTACGCTTGTTCTAAGGGGGAAGCCCGGGGCGGTAATACA
CGACAAAGAGCTCATAGCCGAGCGCGTTGTCTCTATGGTGAAGGACGGCGGCGTTAAGGCCATCAACGGGGAGTGGATCG
AGCTCAGAGCCGACACAATCTGTGTCCATGGAGACAACCCGAAGGCAGTGGAGATAGCAGCTTATATCAGGCGCGTCCTC
GAAGATGAGGGCATCAATGTAGTGCCTATGGGTGAGTTCATAAGGTGA

Upstream 100 bases:

>100_bases
CAACCCCCTGGATGAATATCGCGGCATCTATCACGAACATGTTCTTAACTCGTGGAAACCCTTTTTTAGATTTGGGTCGA
AATGAACCCCGGTGGTGAAG

Downstream 100 bases:

>100_bases
GAGCATGGTCGAGTTCAAACCAGCCGGCGACTCAGCGCTTGTTATCTCCTTCGGCGAGGTAATAGATGAGAATGTAAACA
GAAAAGTCCACGCCGTGGCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKVDLNSDLGESFGRYKLGLDEEVMKYITSANVATGWHAGDPLVMRKTVRLAKEKGVAVGAHPGYPDLLGFGRRYMKLTP
EEARNYILYQIGALHAFTKAEGMELQHVKPHGALYNALVKDEELARAVIEGITDFDRRIIFVMLSGSRPAEIAEEMGLKV
AHEVFADRAYNPDGTLVLRGKPGAVIHDKELIAERVVSMVKDGGVKAINGEWIELRADTICVHGDNPKAVEIAAYIRRVL
EDEGINVVPMGEFIR

Sequences:

>Translated_255_residues
MKVDLNSDLGESFGRYKLGLDEEVMKYITSANVATGWHAGDPLVMRKTVRLAKEKGVAVGAHPGYPDLLGFGRRYMKLTP
EEARNYILYQIGALHAFTKAEGMELQHVKPHGALYNALVKDEELARAVIEGITDFDRRIIFVMLSGSRPAEIAEEMGLKV
AHEVFADRAYNPDGTLVLRGKPGAVIHDKELIAERVVSMVKDGGVKAINGEWIELRADTICVHGDNPKAVEIAAYIRRVL
EDEGINVVPMGEFIR
>Mature_255_residues
MKVDLNSDLGESFGRYKLGLDEEVMKYITSANVATGWHAGDPLVMRKTVRLAKEKGVAVGAHPGYPDLLGFGRRYMKLTP
EEARNYILYQIGALHAFTKAEGMELQHVKPHGALYNALVKDEELARAVIEGITDFDRRIIFVMLSGSRPAEIAEEMGLKV
AHEVFADRAYNPDGTLVLRGKPGAVIHDKELIAERVVSMVKDGGVKAINGEWIELRADTICVHGDNPKAVEIAAYIRRVL
EDEGINVVPMGEFIR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=247, Percent_Identity=43.3198380566802, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1051_THEON (B6YWS6)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002307436.1
- ProteinModelPortal:   B6YWS6
- GeneID:   7018073
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_1051
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 28211; Mature: 28211

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDLNSDLGESFGRYKLGLDEEVMKYITSANVATGWHAGDPLVMRKTVRLAKEKGVAVG
CEECCCCCHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
AHPGYPDLLGFGRRYMKLTPEEARNYILYQIGALHAFTKAEGMELQHVKPHGALYNALVK
CCCCCHHHHHHCHHHEECCHHHHCCEEEEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHC
DEELARAVIEGITDFDRRIIFVMLSGSRPAEIAEEMGLKVAHEVFADRAYNPDGTLVLRG
HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
KPGAVIHDKELIAERVVSMVKDGGVKAINGEWIELRADTICVHGDNPKAVEIAAYIRRVL
CCCCEEEHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEEECCCCCEEHHHHHHHHHH
EDEGINVVPMGEFIR
HCCCCEEEECHHHCC
>Mature Secondary Structure
MKVDLNSDLGESFGRYKLGLDEEVMKYITSANVATGWHAGDPLVMRKTVRLAKEKGVAVG
CEECCCCCHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
AHPGYPDLLGFGRRYMKLTPEEARNYILYQIGALHAFTKAEGMELQHVKPHGALYNALVK
CCCCCHHHHHHCHHHEECCHHHHCCEEEEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHC
DEELARAVIEGITDFDRRIIFVMLSGSRPAEIAEEMGLKVAHEVFADRAYNPDGTLVLRG
HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEC
KPGAVIHDKELIAERVVSMVKDGGVKAINGEWIELRADTICVHGDNPKAVEIAAYIRRVL
CCCCEEEHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEEECCCCCEEHHHHHHHHHH
EDEGINVVPMGEFIR
HCCCCEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA