Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224156

Identifier: 212224156

GI number: 212224156

Start: 930932

End: 931486

Strand: Reverse

Name: 212224156

Synonym: TON_1007

Alternate gene names: NA

Gene position: 931486-930932 (Counterclockwise)

Preceding gene: 212224157

Following gene: 212224155

Centisome position: 50.42

GC content: 50.63

Gene sequence:

>555_bases
ATGGAGTCGACAAAACTCCCGGCATACATCTCCCTCCTCCTACCACTCGTATTTCTTATTGGGCTAATCGTTGTCATTTA
CCAGAATCCTTGGTTTTCATTCACCGACAACGCCCTCAGCGACATGGGGTCAGTACGGAATCCCGTGAACTACTACTTCA
ACGGCTTCATAATGCTCTTTGCCGTTCTGGGCTTCATAGCCTCGCTCGGGGCCTTCAAGAACGGCCTCTCTTATCTCATG
CCCACCGCCATGGTCTCGCTCTTCCTTGTTGGCATCTTTCCTGAGGAATATTCCCTACATACTCCTTCAGCAACTCTCTT
CTATGTCCTGGCGCTAGCGGATATAGTCCTCATAGGGCTCAAGCTCGCTCGTTCTGGCCTTTCCGTCGGGATGCTCTGGG
CAATTCTTTCGGTTGTTACTTTTGTGGTGATGCTCTACATGGTGAAAGCTCGCGTTTTCAAGGGCCTTGCTATCCCCGAG
CTTATAGGTGCGGCCATGATACTGGCCTGGTTTACCTATATTGGCCTGCTCCAGATTAGAGGTTCCCAACTCTAA

Upstream 100 bases:

>100_bases
GAGGCATCCAGTAATAAGGGGTTCCTGGGAGGAGTTCAGAAAGCTCTACAAGGCCGTCTTCGGCGAAGAACCGAAAAATA
GGGCATGTTGAGGTGATGTT

Downstream 100 bases:

>100_bases
GTTGAGGAAAACTTCATATATGGCTCTCCCCTTCTTCCGAACATGAAAGCTGTTGCACTGCTCAGCTCGGGCATTGATTC
TCCAGTGGCGATATACCTCA

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM
PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE
LIGAAMILAWFTYIGLLQIRGSQL

Sequences:

>Translated_184_residues
MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM
PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE
LIGAAMILAWFTYIGLLQIRGSQL
>Mature_184_residues
MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM
PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE
LIGAAMILAWFTYIGLLQIRGSQL

Specific function: Unknown

COG id: COG3371

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20264; Mature: 20264

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
AVLGFIASLGAFKNGLSYLMPTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPELIGAAMILAWFTYIGLLQIR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GSQL
CCCC
>Mature Secondary Structure
MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
AVLGFIASLGAFKNGLSYLMPTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPELIGAAMILAWFTYIGLLQIR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GSQL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA