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The map label for this gene is yrbG [C]

Identifier: 212224113

GI number: 212224113

Start: 888060

End: 888995

Strand: Reverse

Name: yrbG [C]

Synonym: TON_0964

Alternate gene names: 212224113

Gene position: 888995-888060 (Counterclockwise)

Preceding gene: 212224114

Following gene: 212224112

Centisome position: 48.12

GC content: 54.7

Gene sequence:

>936_bases
GTGGTAGTTGAAATAGTCATGTTCATTGTGGGACTCGCCCTTCTAATCAAGGGGAGCGATTTCTTCGTTGAGGCCGCTTC
GAGGGTGGCCAAGGGCTTTGGAGTGAGTGAGTTCATTATAGCGCTCGTTCTGGCAAGCATAGCGACGACCCTGCCCGAGG
TCACAGTCTCGGCGATATCGTCCTATCAGGGAAAACCTGACATCGCCCTCGGAAATGCCATCGGGAGTGCCCTCGCCAAC
ATAGCCCTTATCCTCGGTGTCTCATCACTCCTCCGCCCGCTTAAGGTCGAGAGAACCGCCTGGAAGAACGCCCTCTTCAT
GATAGTGGTCACAGCTTACGCTGGACTGCTCATGTACGACGGCACGATAAGCAGGCTCGACGGCGCGAGCCTGATACTCA
TCTACTTTGGCTTCCTCTACTACCTCTACCAAAAGCACATGACCCTGGAAGAGCTTCCGGAAGGAGGGCGCGGAAATCCA
AAGCGGGACGCGCTTATAATGTTCGGGAGCGGACTGCTCGTTGTCACTGGTGCGAAACTCGTCGTCGACAGCGCCGTCAC
CCTCGCGAGGGCCTTCGGTGTTCCCGAAGTGATTATAGGGCTTACGATGGTCTCAATAGGAACCTCCCTGCCTGAGTTCA
CTAACTCCCTAATGGCCACCATAAAACGGCTCCCCAACATCAGCGTGGGCAACATCATCGGTGCCAACATCCTTAACATG
CTTGTGGTCATAGGAGTTGCGGCGCTTATAAACCCAATCAGAGTTGACCAAACTATATATACCTTTATCCTCCCGCTAAC
GCTTCTTGTCATGGGCATATTGACGGGAGCGCTCCGCTTCACGGGCAGAGTGAGTAGAGCAACCGGTGGAGTCCTGCTGG
CGATATACTGCTACTTCCTTTACCTGGCTGCTACCGGGGGAGTGAGCCTCCCCTAA

Upstream 100 bases:

>100_bases
ATGCTGCGGACTACGTCATCAAAATGGAGGGCAAGGGGAACGGGGGCTACGGAGCCAAATAACTTTTAAGGACTCTTCCC
AGCCTACTCTGGTGAGGGCA

Downstream 100 bases:

>100_bases
CGTCCAACGTTTTAATGTTTCCCTTGATCTGACTTTTTCAAGGTCACAATTCTGGGAGGCAAAGCTTTATTAGGCATCGT
ATTACCACATTATTGAAAAT

Product: Ca2+/Na+ antiporter

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVVEIVMFIVGLALLIKGSDFFVEAASRVAKGFGVSEFIIALVLASIATTLPEVTVSAISSYQGKPDIALGNAIGSALAN
IALILGVSSLLRPLKVERTAWKNALFMIVVTAYAGLLMYDGTISRLDGASLILIYFGFLYYLYQKHMTLEELPEGGRGNP
KRDALIMFGSGLLVVTGAKLVVDSAVTLARAFGVPEVIIGLTMVSIGTSLPEFTNSLMATIKRLPNISVGNIIGANILNM
LVVIGVAALINPIRVDQTIYTFILPLTLLVMGILTGALRFTGRVSRATGGVLLAIYCYFLYLAATGGVSLP

Sequences:

>Translated_311_residues
MVVEIVMFIVGLALLIKGSDFFVEAASRVAKGFGVSEFIIALVLASIATTLPEVTVSAISSYQGKPDIALGNAIGSALAN
IALILGVSSLLRPLKVERTAWKNALFMIVVTAYAGLLMYDGTISRLDGASLILIYFGFLYYLYQKHMTLEELPEGGRGNP
KRDALIMFGSGLLVVTGAKLVVDSAVTLARAFGVPEVIIGLTMVSIGTSLPEFTNSLMATIKRLPNISVGNIIGANILNM
LVVIGVAALINPIRVDQTIYTFILPLTLLVMGILTGALRFTGRVSRATGGVLLAIYCYFLYLAATGGVSLP
>Mature_311_residues
MVVEIVMFIVGLALLIKGSDFFVEAASRVAKGFGVSEFIIALVLASIATTLPEVTVSAISSYQGKPDIALGNAIGSALAN
IALILGVSSLLRPLKVERTAWKNALFMIVVTAYAGLLMYDGTISRLDGASLILIYFGFLYYLYQKHMTLEELPEGGRGNP
KRDALIMFGSGLLVVTGAKLVVDSAVTLARAFGVPEVIIGLTMVSIGTSLPEFTNSLMATIKRLPNISVGNIIGANILNM
LVVIGVAALINPIRVDQTIYTFILPLTLLVMGILTGALRFTGRVSRATGGVLLAIYCYFLYLAATGGVSLP

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=264, Percent_Identity=37.5, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 32924; Mature: 32924

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEIVMFIVGLALLIKGSDFFVEAASRVAKGFGVSEFIIALVLASIATTLPEVTVSAIS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SYQGKPDIALGNAIGSALANIALILGVSSLLRPLKVERTAWKNALFMIVVTAYAGLLMYD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTISRLDGASLILIYFGFLYYLYQKHMTLEELPEGGRGNPKRDALIMFGSGLLVVTGAKL
CCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECCCEEEEECHHH
VVDSAVTLARAFGVPEVIIGLTMVSIGTSLPEFTNSLMATIKRLPNISVGNIIGANILNM
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LVVIGVAALINPIRVDQTIYTFILPLTLLVMGILTGALRFTGRVSRATGGVLLAIYCYFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
YLAATGGVSLP
HHHHCCCCCCC
>Mature Secondary Structure
MVVEIVMFIVGLALLIKGSDFFVEAASRVAKGFGVSEFIIALVLASIATTLPEVTVSAIS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SYQGKPDIALGNAIGSALANIALILGVSSLLRPLKVERTAWKNALFMIVVTAYAGLLMYD
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTISRLDGASLILIYFGFLYYLYQKHMTLEELPEGGRGNPKRDALIMFGSGLLVVTGAKL
CCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECCCEEEEECHHH
VVDSAVTLARAFGVPEVIIGLTMVSIGTSLPEFTNSLMATIKRLPNISVGNIIGANILNM
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LVVIGVAALINPIRVDQTIYTFILPLTLLVMGILTGALRFTGRVSRATGGVLLAIYCYFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH
YLAATGGVSLP
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]