Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223979

Identifier: 212223979

GI number: 212223979

Start: 769158

End: 769862

Strand: Reverse

Name: 212223979

Synonym: TON_0830

Alternate gene names: NA

Gene position: 769862-769158 (Counterclockwise)

Preceding gene: 212223980

Following gene: 212223968

Centisome position: 41.67

GC content: 51.06

Gene sequence:

>705_bases
ATGAGTTTTGTGAAGAAGTTCCTCGCCATTTACAGGATTGACTGGAAGATGCTGAAAAGGGACCCGATGCTCGTTTACAG
CATCATCATTACCATAATCCTTCTTTTCGTCGTCCGCTACTTCAAGGACCGGCTGGGGGTTCTCTATCCGCCTGCAGCAA
TCTTTTCCATCATCTTCATTCCCCTCATCTTCGGCATGATTCCTGGCTTCATGATGGCCAACGAAAAGGAAGAGAAAACT
ATAGAGGCCCTTCAGGTGATTCCGATATCGAGCGAGGCCTTCTTGACATACCGGCTCCTCTGGGCGTCTGCTGTAACGGG
TATCCTCACGGGCCTAGCGCCGAAAATTCTTGACATAACTGTTCCGTGGAAAGGCCTCCTGGCGCTCATGGCACTTTTCA
TCATTGAAGTGTGGACCTATGCGCTGTTGATAACTGACTTCTCGGAGACTAGGATGCAGGCTTTGACAGTTTCAAAAGTC
GCCGGCTGGCTGCTAATCCTTCCGCCGGCCATAAAGTTCATCGTGATCGCCAGGAACATATCAACTGATTGGAGCAAGTT
CACGGCCTTTCTTCCGACCTACTGGATCCACAGGCTCTTCGAGGGGATTCCTTTCAACGACTACGGCGATTTCTGGCCGG
GGCTGGCGGTTCACCTAGCGTGGCTTGTCCCACTTGTAGTGCTGTTCAAGAAGAGGGTGCTTTGA

Upstream 100 bases:

>100_bases
AAACGCTGATGTGGTCGGGCATTGCCCTTGTAATCTGGGGCATCGTAGCATACAACCTCGCTAAAATCCGCTTTTACAAA
TACGCCGTGGAGGGATTGAG

Downstream 100 bases:

>100_bases
AAATCCTTGCTTTAGCTTTTATTTTGGGCTTTACAGCCCAACAGAAGAGAAATCAGAAAAGAAGGGCAAAAGTCCATTTT
CACTCAAGCTTCTTGTAACA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKT
IEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKV
AGWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL

Sequences:

>Translated_234_residues
MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKT
IEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKV
AGWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL
>Mature_233_residues
SFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKTI
EALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVA
GWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26892; Mature: 26761

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFI
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
PLIFGMIPGFMMANEKEEKTIEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDIT
HHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE
VPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVAGWLLILPPAIKFIVIARNI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
PLIFGMIPGFMMANEKEEKTIEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDIT
HHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE
VPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVAGWLLILPPAIKFIVIARNI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
STDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA