| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223910
Identifier: 212223910
GI number: 212223910
Start: 708121
End: 708531
Strand: Reverse
Name: 212223910
Synonym: TON_0761
Alternate gene names: NA
Gene position: 708531-708121 (Counterclockwise)
Preceding gene: 212223911
Following gene: 212223909
Centisome position: 38.35
GC content: 52.07
Gene sequence:
>411_bases ATGAGGGTGGAGATAAAGGCCAGAAACAACGCCGAGCTCATAAGGAAACTCAATGAAGTCTTAAACGACGAGGTTACCGA GGTCTACATCAACCTCCGCCCGACAAAGGAGATACTCGTGAGGATACTTGAGCGTGCGCCGAACGTTAGGAAAATCTCCT GTCCGCCGAGTCTCTATCCCAAGGTCTCGAAAAAAGCGATAAACGCCCTTGCGCAGATGGGCATAGAGCTCGTTCCCGAG GGCTATCCCCGTGGAAGGCCGCGGAAGTACGATGAGCGGACTATCCGCGAGGTTTACAACCTTATACGGAAGGGTATAAC CCCCAAGGAGATAAGCTCCCGCATGGGAATTCCGCTAAGGACGGTTTACTACATGATCGAGCAGATAGGTGCTCGGCAAT GGAAAGAATGA
Upstream 100 bases:
>100_bases CTCCACAAGACGCTCTTCGCCGACACCAAGAAGTTCGAGAAGTTCATGCCCAAGAGCGACAGGGCGAAGCAGTTCCTAGC GCTCCTCCAGGGGTGAGGAC
Downstream 100 bases:
>100_bases AGGCCCTCTACGGGGTCCTTTTCTCCACTCTCCTTATCACCTTAGCCCTTCTCGGAAGCACGGCCGTTTACGGTGGCGTC ACGGTGTTCAACATCGAATG
Product: DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE
Sequences:
>Translated_136_residues MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE >Mature_136_residues MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE
Specific function: Unknown
COG id: COG1710
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15904; Mature: 15904
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYP CEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCH KVSKKAINALAQMGIELVPEGYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLR HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH TVYYMIEQIGARQWKE HHHHHHHHHHHHCCCC >Mature Secondary Structure MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYP CEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCH KVSKKAINALAQMGIELVPEGYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLR HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH TVYYMIEQIGARQWKE HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA