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The map label for this gene is ftsY [C]

Identifier: 212223740

GI number: 212223740

Start: 543199

End: 544104

Strand: Reverse

Name: ftsY [C]

Synonym: TON_0592

Alternate gene names: 212223740

Gene position: 544104-543199 (Counterclockwise)

Preceding gene: 212223741

Following gene: 212223737

Centisome position: 29.45

GC content: 54.64

Gene sequence:

>906_bases
ATGTTCAGAAAGCTGAAGGAGAAGCTAGGCTCATTCGTCGAGAAGGTTTCCCAGACTGAGATAAGAGAGAAAGACGTCGA
GAACGCCCTCTGGGATCTTGAGCTAGAACTCCTCGAGGCTGACGTTGCCCTCGAAACGGTGGAGGCTCTCAGGGAGAAGA
TAAAAGAGAAGCTCGTCGGCCAGAAGGTCAAGATAGGGACGAACAAGAAGGGACTAGTAGAGAAAGCCGTTAGGGAGGCT
GTTCTGGAGGTGCTGACCCCAGAGAAGAGGATAGACCTCCTCGAGATGATTCGCTCAAAGGAAGAAAAGCCCTTCGTCAT
AGCCTTTGTTGGCTTCAACGGCTCGGGGAAAACCACGACCATAGCCAAGCTCGCCCACTGGCTCAAGAAGAACGGCCTTT
CCGTCGTCATAGCAGCGAGCGACACCTTCAGAGCAGGGGCAATAGAGCAGGTAGAAGAGCACGCAAAGCGTGTTGGTGTT
AAGGTTATCAAGCACTCCTACGGCGCTGATCCGGCGGCGGTAGCCTACGACGCAATAGGGCATGCGAAGGCGAGGGGCAT
TGATGTCGTTCTCATAGACACCGCCGGGAGGAATGAGCTCAACAGAAACCTTATGGACGAAATGAAGAAGATAGTGCGCG
TTACCAAGCCTGACCTTGTCATCTTCGTCGGCGACAGCTTAGCCGGAAACGCCGTGGTAGAGCAGGCAAAGCAGTTCAAC
GAGGCTGTTAGGATAGATGGGGTAATTCTCACAAAGCTCGATGCCGACGCCCGTGGTGGGGCCGCACTCAGCATAAGCCA
CGCCATAGGGGCGCCGATACTCTTTGTCGGCGTCGGTCAGGGCTACGACGACCTCAAGCCCTTCGACGAGAAGTGGTTCG
TTGAGAGGATTTTTGGGGAGGCCTAA

Upstream 100 bases:

>100_bases
CGAGCGGTTTCGGGTCTGAGGTGTGATGACACCAGCTATCGCAGAGGGCATTTCATAATAATTATATACGTCCAAGCGTC
TCGCTCATCAGGTGGTGAAT

Downstream 100 bases:

>100_bases
GACTCCCATCCTTTTTCTCGGTGTTTCCATGTTAGACTGCCACAGCGACACCCATGCGGATTAAAGCCCACAGCATGAAC
GCCACCACGACCGAGGTTAG

Product: signal recognition particle GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFRKLKEKLGSFVEKVSQTEIREKDVENALWDLELELLEADVALETVEALREKIKEKLVGQKVKIGTNKKGLVEKAVREA
VLEVLTPEKRIDLLEMIRSKEEKPFVIAFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAASDTFRAGAIEQVEEHAKRVGV
KVIKHSYGADPAAVAYDAIGHAKARGIDVVLIDTAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFN
EAVRIDGVILTKLDADARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIFGEA

Sequences:

>Translated_301_residues
MFRKLKEKLGSFVEKVSQTEIREKDVENALWDLELELLEADVALETVEALREKIKEKLVGQKVKIGTNKKGLVEKAVREA
VLEVLTPEKRIDLLEMIRSKEEKPFVIAFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAASDTFRAGAIEQVEEHAKRVGV
KVIKHSYGADPAAVAYDAIGHAKARGIDVVLIDTAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFN
EAVRIDGVILTKLDADARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIFGEA
>Mature_301_residues
MFRKLKEKLGSFVEKVSQTEIREKDVENALWDLELELLEADVALETVEALREKIKEKLVGQKVKIGTNKKGLVEKAVREA
VLEVLTPEKRIDLLEMIRSKEEKPFVIAFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAASDTFRAGAIEQVEEHAKRVGV
KVIKHSYGADPAAVAYDAIGHAKARGIDVVLIDTAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFN
EAVRIDGVILTKLDADARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIFGEA

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=320, Percent_Identity=37.5, Blast_Score=217, Evalue=1e-56,
Organism=Homo sapiens, GI23308697, Length=320, Percent_Identity=37.5, Blast_Score=216, Evalue=1e-56,
Organism=Homo sapiens, GI4507215, Length=296, Percent_Identity=32.7702702702703, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI226371618, Length=234, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=6e-39,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=35.2941176470588, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI1789874, Length=202, Percent_Identity=48.5148514851485, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788963, Length=301, Percent_Identity=35.8803986710963, Blast_Score=184, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI193206261, Length=291, Percent_Identity=40.893470790378, Blast_Score=202, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17539958, Length=297, Percent_Identity=30.6397306397306, Blast_Score=169, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320498, Length=314, Percent_Identity=34.0764331210191, Blast_Score=179, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6325345, Length=267, Percent_Identity=35.9550561797753, Blast_Score=170, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24641198, Length=291, Percent_Identity=37.4570446735395, Blast_Score=198, Evalue=4e-51,
Organism=Drosophila melanogaster, GI17647949, Length=282, Percent_Identity=37.2340425531915, Blast_Score=182, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33068; Mature: 33068

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKLKEKLGSFVEKVSQTEIREKDVENALWDLELELLEADVALETVEALREKIKEKLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QKVKIGTNKKGLVEKAVREAVLEVLTPEKRIDLLEMIRSKEEKPFVIAFVGFNGSGKTTT
CEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHH
IAKLAHWLKKNGLSVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIG
HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
HAKARGIDVVLIDTAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFN
CHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
EAVRIDGVILTKLDADARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIFGE
HHHEECCEEEEEECCCCCCCCEEEEHHHCCCCEEEEECCCCCHHCCCCHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MFRKLKEKLGSFVEKVSQTEIREKDVENALWDLELELLEADVALETVEALREKIKEKLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QKVKIGTNKKGLVEKAVREAVLEVLTPEKRIDLLEMIRSKEEKPFVIAFVGFNGSGKTTT
CEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHH
IAKLAHWLKKNGLSVVIAASDTFRAGAIEQVEEHAKRVGVKVIKHSYGADPAAVAYDAIG
HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
HAKARGIDVVLIDTAGRNELNRNLMDEMKKIVRVTKPDLVIFVGDSLAGNAVVEQAKQFN
CHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
EAVRIDGVILTKLDADARGGAALSISHAIGAPILFVGVGQGYDDLKPFDEKWFVERIFGE
HHHEECCEEEEEECCCCCCCCEEEEHHHCCCCEEEEECCCCCHHCCCCHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]