Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223737

Identifier: 212223737

GI number: 212223737

Start: 540796

End: 541767

Strand: Reverse

Name: 212223737

Synonym: TON_0589

Alternate gene names: NA

Gene position: 541767-540796 (Counterclockwise)

Preceding gene: 212223740

Following gene: 212223736

Centisome position: 29.32

GC content: 52.67

Gene sequence:

>972_bases
ATGACGTACTGGACGAGTGAGGACAACGTTGCTGGAAAGCCCGGGACTGCACTCTTCATAATCCTGCCCACGATAGGCTG
CTATCGCTTTAGGATAGGCCAGGCCTGCTACATGTGCGCATACCCAACGGCAGCTCCAAAGGTTAGATGGAGCCAGGATG
CCCTAGTCGATTACGTTAGAGAGGCCTTAAAGAAGGTAGAGGGCAGGAAGAGGGTTGCAGTGAGGATGTTCACCTCAGGT
TCATTCCTTGACAACGGCGAGCTAAAGCCTGAAACGAGGAGAAAAATCTTCGAGATTCTTGCGGGAATGGAGAATGTAGA
AGAGATTGTGATAGAGAGCAGGAGCGAACTTGTTCGCTACGACGCGGTTAGAGAGCTCGCAGAGATAGTTCCAGACAAGC
ATTTTGAGGTAGCCATAGGGCTCGAAACCGCCAACGATGACATAGCCGACGTTTCAATAAACAAAGGCAACACCTTCGAC
GACTTCGTTAAGGCTGCAGAGATAACACACGAAGCGGGTGCGAAGGTGAAAACGTACCTCCTCCTGAAGACGATCTTCCT
TAGTGAGCGCGACGGCATAGAGGACGTCAAGGCGAGCATCATAAAAGCCGAGCCCTACACGGACACCTTTTCCATAAATA
TCACTGACATCCAGAAAGGGACGCTCTATGAGAGACTCTGGGAGAAGGGTGAATACCGCCCGCCCTGGCTCTGGAGTGCG
GTGGAGATACTCCTGTGGGCAAAGAAGCGCTTCCCAGACAAGAGAATCCTGAGCGACCCTGTTGGAGCGGGTTCGAGACG
TGGCCCCCACAACTGCCTCACCGACTACGACAGACAGATAGGCAGAGCGATAAAGAAGTTCTCCGCAACGCAGGATCTCA
AATACATCGAGAACCTCAAGCCCGAGTGCAGGGAGAGATGGGAGTACATAGTCGAGAACGGTCTCCTCGACTGGCAGTTG
ATGACGTGGTGA

Upstream 100 bases:

>100_bases
ATAAATTCCGTCATCGTTAGTTATGAGTATCCTGGGCATACTATGAACTAAGGCCTCACCTTTAAAAACCTTGATTTCCA
GCCTAAGCTGGTGTTAAAAG

Downstream 100 bases:

>100_bases
ATGGATTTCGTTTTTAAAATGCTTTTTATGCGCTCTTTTCGACTCATTTTTAATGTCCGTCGGGCTTCTTTGATGATCAT
AGATGTACCTCCACGAAAGC

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTYWTSEDNVAGKPGTALFIILPTIGCYRFRIGQACYMCAYPTAAPKVRWSQDALVDYVREALKKVEGRKRVAVRMFTSG
SFLDNGELKPETRRKIFEILAGMENVEEIVIESRSELVRYDAVRELAEIVPDKHFEVAIGLETANDDIADVSINKGNTFD
DFVKAAEITHEAGAKVKTYLLLKTIFLSERDGIEDVKASIIKAEPYTDTFSINITDIQKGTLYERLWEKGEYRPPWLWSA
VEILLWAKKRFPDKRILSDPVGAGSRRGPHNCLTDYDRQIGRAIKKFSATQDLKYIENLKPECRERWEYIVENGLLDWQL
MTW

Sequences:

>Translated_323_residues
MTYWTSEDNVAGKPGTALFIILPTIGCYRFRIGQACYMCAYPTAAPKVRWSQDALVDYVREALKKVEGRKRVAVRMFTSG
SFLDNGELKPETRRKIFEILAGMENVEEIVIESRSELVRYDAVRELAEIVPDKHFEVAIGLETANDDIADVSINKGNTFD
DFVKAAEITHEAGAKVKTYLLLKTIFLSERDGIEDVKASIIKAEPYTDTFSINITDIQKGTLYERLWEKGEYRPPWLWSA
VEILLWAKKRFPDKRILSDPVGAGSRRGPHNCLTDYDRQIGRAIKKFSATQDLKYIENLKPECRERWEYIVENGLLDWQL
MTW
>Mature_322_residues
TYWTSEDNVAGKPGTALFIILPTIGCYRFRIGQACYMCAYPTAAPKVRWSQDALVDYVREALKKVEGRKRVAVRMFTSGS
FLDNGELKPETRRKIFEILAGMENVEEIVIESRSELVRYDAVRELAEIVPDKHFEVAIGLETANDDIADVSINKGNTFDD
FVKAAEITHEAGAKVKTYLLLKTIFLSERDGIEDVKASIIKAEPYTDTFSINITDIQKGTLYERLWEKGEYRPPWLWSAV
EILLWAKKRFPDKRILSDPVGAGSRRGPHNCLTDYDRQIGRAIKKFSATQDLKYIENLKPECRERWEYIVENGLLDWQLM
TW

Specific function: Unknown

COG id: COG1244

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005909
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37106; Mature: 36975

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYWTSEDNVAGKPGTALFIILPTIGCYRFRIGQACYMCAYPTAAPKVRWSQDALVDYVR
CCEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHH
EALKKVEGRKRVAVRMFTSGSFLDNGELKPETRRKIFEILAGMENVEEIVIESRSELVRY
HHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
DAVRELAEIVPDKHFEVAIGLETANDDIADVSINKGNTFDDFVKAAEITHEAGAKVKTYL
HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LLKTIFLSERDGIEDVKASIIKAEPYTDTFSINITDIQKGTLYERLWEKGEYRPPWLWSA
HHHHHHHCCCCCHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHH
VEILLWAKKRFPDKRILSDPVGAGSRRGPHNCLTDYDRQIGRAIKKFSATQDLKYIENLK
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PECRERWEYIVENGLLDWQLMTW
HHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
TYWTSEDNVAGKPGTALFIILPTIGCYRFRIGQACYMCAYPTAAPKVRWSQDALVDYVR
CEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHH
EALKKVEGRKRVAVRMFTSGSFLDNGELKPETRRKIFEILAGMENVEEIVIESRSELVRY
HHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
DAVRELAEIVPDKHFEVAIGLETANDDIADVSINKGNTFDDFVKAAEITHEAGAKVKTYL
HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHH
LLKTIFLSERDGIEDVKASIIKAEPYTDTFSINITDIQKGTLYERLWEKGEYRPPWLWSA
HHHHHHHCCCCCHHHHHHHHEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCHHHHH
VEILLWAKKRFPDKRILSDPVGAGSRRGPHNCLTDYDRQIGRAIKKFSATQDLKYIENLK
HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PECRERWEYIVENGLLDWQLMTW
HHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]