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The map label for this gene is asnC [C]

Identifier: 212223671

GI number: 212223671

Start: 480163

End: 480612

Strand: Reverse

Name: asnC [C]

Synonym: TON_0523

Alternate gene names: 212223671

Gene position: 480612-480163 (Counterclockwise)

Preceding gene: 212223672

Following gene: 212223670

Centisome position: 26.01

GC content: 43.11

Gene sequence:

>450_bases
ATGGCAGATAAAATAAACGGGATTGACATAAGGATTTTGAGGCTTCTCGCCAAGAACGCGCGTTTGACCTACAAGGAGCT
CGCCGAAATTCTTGGCACGACAAGACAGAGAATCTCCAGGAGAATGGATCGTCTCGAGAGAAATGGTATAATCAAAAAGT
ATACTATAATCCCTGACTATGATGCTCTCGGATACATTCACGTCATCCTCGGGATAACTGTTAAGCCTTCGATTGACCTT
GACGAGGTAATTTCTTCTCTGAAGGATGATGAAAACATCAAGATAATTCAGCGTGCCATTGGTTCGCACAATTTGGTTAT
CCACATCGTTGGTCCAAAGGATATGAAAGAGCTGGAGAGAATCATCGCCGATGTTTCCAAGAAGATACCAGGCATTGACA
AGCTTGATATAACCTTCGTAACAGACACCGTGAAGTTTGAGGTTCTCTGA

Upstream 100 bases:

>100_bases
GTCATTTGGGATAACCTACTGGTTAGAAATCCTCCAAATTGTCGAAACATTTTTATAATTGGGAGCATAATCACAAACAT
AATCCCGGGAGGTGGATGTG

Downstream 100 bases:

>100_bases
TTTCTTTTACTTCCTTCGTCCATTGACGAAGGAAAGAATAATAAAGCCTCAGTTGGGGCATTTTCCAGGTGACAGAGATG
CTCGAGAGACTGGCAGTGGA

Product: putative transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MADKINGIDIRILRLLAKNARLTYKELAEILGTTRQRISRRMDRLERNGIIKKYTIIPDYDALGYIHVILGITVKPSIDL
DEVISSLKDDENIKIIQRAIGSHNLVIHIVGPKDMKELERIIADVSKKIPGIDKLDITFVTDTVKFEVL

Sequences:

>Translated_149_residues
MADKINGIDIRILRLLAKNARLTYKELAEILGTTRQRISRRMDRLERNGIIKKYTIIPDYDALGYIHVILGITVKPSIDL
DEVISSLKDDENIKIIQRAIGSHNLVIHIVGPKDMKELERIIADVSKKIPGIDKLDITFVTDTVKFEVL
>Mature_148_residues
ADKINGIDIRILRLLAKNARLTYKELAEILGTTRQRISRRMDRLERNGIIKKYTIIPDYDALGYIHVILGITVKPSIDLD
EVISSLKDDENIKIIQRAIGSHNLVIHIVGPKDMKELERIIADVSKKIPGIDKLDITFVTDTVKFEVL

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16959; Mature: 16828

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKINGIDIRILRLLAKNARLTYKELAEILGTTRQRISRRMDRLERNGIIKKYTIIPDY
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
DALGYIHVILGITVKPSIDLDEVISSLKDDENIKIIQRAIGSHNLVIHIVGPKDMKELER
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHH
IIADVSKKIPGIDKLDITFVTDTVKFEVL
HHHHHHHHCCCCCCEEEEEEECEEEEEEC
>Mature Secondary Structure 
ADKINGIDIRILRLLAKNARLTYKELAEILGTTRQRISRRMDRLERNGIIKKYTIIPDY
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
DALGYIHVILGITVKPSIDLDEVISSLKDDENIKIIQRAIGSHNLVIHIVGPKDMKELER
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHH
IIADVSKKIPGIDKLDITFVTDTVKFEVL
HHHHHHHHCCCCCCEEEEEEECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA