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The map label for this gene is 212223670

Identifier: 212223670

GI number: 212223670

Start: 479372

End: 480085

Strand: Reverse

Name: 212223670

Synonym: TON_0522

Alternate gene names: NA

Gene position: 480085-479372 (Counterclockwise)

Preceding gene: 212223671

Following gene: 212223662

Centisome position: 25.98

GC content: 49.72

Gene sequence:

>714_bases
ATGCTCGAGAGACTGGCAGTGGACGTTGCAGTGGTTGCAGGGCTTGGCATAGGATCATACAAACTGAAAGCCCTTGATGC
TAAGGGTGCTTTGGCAGCTGCAGCTGTCGGTCTGGTCGTTCTGGAGCTTGGTGGTTTTTATCCCTTCTTGGCGATGGTAA
CCTTCGTGGTTCTTGGAGTCCTTGCAACCAAGTACCGGTTCAGGGAAAAGGCAAAACTCGGCCTTGCTCAGAGCAGAAAC
GGTGTGAGGGGTTGGGGCAACGTTATGGGCAATGGCCTTGCCGCAGTAATCTTTCTGGCCTTTGAATACTTCTCCCATAT
GGACGTTTTCTGGGCAGCGACTTTTGCTTCGATAGCTACAGTTAATGGAGATACTCTTGCGAGCGAGCTTGGAAAGATTT
TCGGAAAAAATCCAAGGTTGATAACCACCTTTGAGCCAGCTAGACCCGGTGTTAACGGAGCTATTTCGTGGCCCGGAGAG
CTGTTCGCACTTTTGGGTTCTTTCATTATGGCCCTGTTCGCCCTTCCACTCACAGAGCAAAAGATCATGATGCTCCTGGC
TGTTACCATTGGCGGATTTATCGGGGTCAACTTAGACAGTCTTATTGGAGCTACCCTTGAAAACGAGGGAATAACAAATA
ATAACTCGACAAACTTTCTTGCTTCACTCTTTGGCGGCTCCATCGGTGCACTTCTCTTCTACGTCCTCGCGTGA

Upstream 100 bases:

>100_bases
CCGTGAAGTTTGAGGTTCTCTGATTTCTTTTACTTCCTTCGTCCATTGACGAAGGAAAGAATAATAAAGCCTCAGTTGGG
GCATTTTCCAGGTGACAGAG

Downstream 100 bases:

>100_bases
AGTTTAAAAGAAAACCTGAAAAAGCCTGACTGGCGGATGATGACTACGGCGGATTCCTGAGCGGTGAGGAAGACCTTAGG
GTCTGACGCCGCTGTACAAT

Product: membrane protein, conserved

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MLERLAVDVAVVAGLGIGSYKLKALDAKGALAAAAVGLVVLELGGFYPFLAMVTFVVLGVLATKYRFREKAKLGLAQSRN
GVRGWGNVMGNGLAAVIFLAFEYFSHMDVFWAATFASIATVNGDTLASELGKIFGKNPRLITTFEPARPGVNGAISWPGE
LFALLGSFIMALFALPLTEQKIMMLLAVTIGGFIGVNLDSLIGATLENEGITNNNSTNFLASLFGGSIGALLFYVLA

Sequences:

>Translated_237_residues
MLERLAVDVAVVAGLGIGSYKLKALDAKGALAAAAVGLVVLELGGFYPFLAMVTFVVLGVLATKYRFREKAKLGLAQSRN
GVRGWGNVMGNGLAAVIFLAFEYFSHMDVFWAATFASIATVNGDTLASELGKIFGKNPRLITTFEPARPGVNGAISWPGE
LFALLGSFIMALFALPLTEQKIMMLLAVTIGGFIGVNLDSLIGATLENEGITNNNSTNFLASLFGGSIGALLFYVLA
>Mature_237_residues
MLERLAVDVAVVAGLGIGSYKLKALDAKGALAAAAVGLVVLELGGFYPFLAMVTFVVLGVLATKYRFREKAKLGLAQSRN
GVRGWGNVMGNGLAAVIFLAFEYFSHMDVFWAATFASIATVNGDTLASELGKIFGKNPRLITTFEPARPGVNGAISWPGE
LFALLGSFIMALFALPLTEQKIMMLLAVTIGGFIGVNLDSLIGATLENEGITNNNSTNFLASLFGGSIGALLFYVLA

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=229, Percent_Identity=28.3842794759825, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 24934; Mature: 24934

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLAVDVAVVAGLGIGSYKLKALDAKGALAAAAVGLVVLELGGFYPFLAMVTFVVLGV
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LATKYRFREKAKLGLAQSRNGVRGWGNVMGNGLAAVIFLAFEYFSHMDVFWAATFASIAT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNGDTLASELGKIFGKNPRLITTFEPARPGVNGAISWPGELFALLGSFIMALFALPLTEQ
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
KIMMLLAVTIGGFIGVNLDSLIGATLENEGITNNNSTNFLASLFGGSIGALLFYVLA
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHC
>Mature Secondary Structure
MLERLAVDVAVVAGLGIGSYKLKALDAKGALAAAAVGLVVLELGGFYPFLAMVTFVVLGV
CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LATKYRFREKAKLGLAQSRNGVRGWGNVMGNGLAAVIFLAFEYFSHMDVFWAATFASIAT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNGDTLASELGKIFGKNPRLITTFEPARPGVNGAISWPGELFALLGSFIMALFALPLTEQ
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
KIMMLLAVTIGGFIGVNLDSLIGATLENEGITNNNSTNFLASLFGGSIGALLFYVLA
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]