| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is nuoI [H]
Identifier: 212223633
GI number: 212223633
Start: 446875
End: 447573
Strand: Reverse
Name: nuoI [H]
Synonym: TON_0486
Alternate gene names: 212223633
Gene position: 447573-446875 (Counterclockwise)
Preceding gene: 212223634
Following gene: 212223632
Centisome position: 24.22
GC content: 50.79
Gene sequence:
>699_bases ATGGAGGTTGATTTTAAGGTCGCCCCAGAGGAGAAAGTCAGGAAGAAGCCATCATTCATCAAGCCCTGGATGGGCCTCAA GTACCTCTTCAAGAAGCCCGTTACTATCAAGATACCCTACGAGAGGGTACAGATAGCTAAGGACTACAGGGGATTCCACA CCCTAGACTGGAAGAAGTGTGTCGGCTGTAACTTCTGCGGCCAGATATGTCCGGCGAGGGCAATAGAGATGACCTGGATA GAAGTGGATGGCAAGATGGAGAAGAGGCCACATCCAAAGATAGACTATGGCAGGTGTACCTTCTGTGAGTTCTGTGTCGA CGTCTGTCCACCTGGAGCGCTGGGCTTCATCGAGAACTACATCCTCACCACCGAGTGGAAGGACGAGGAGCTGGAGCTCT TTGACTGGGTTCCAATCCATCCAGACAAGTTCAGGGAGATAAACGAGAAGTTCCCCGACTACAGATTCCCGGTGGAGAAG ATAGAGTTCAACAAGGAAACGAAGGAGGTCACCTACTACCTGAGAGACGGAGAGGTCATGAAGTTCAAGATACTCGGCTA CGGCATCAGACCGCCGAAGCCACCGACAAAGCCTGCTCAGAAGGCAGCCGCAAAAGCAGCGGAAAAGAATGATACCAAGC CTGTTGAAAAGCCCACTGAGAAGAAGGAAGCTGGGAAGATAGAAGAAAAGAAAGAATGA
Upstream 100 bases:
>100_bases GGGTTCTCGAGCAGCTCTTGGTTGGAGCAAGAATAGCCGACGTCCCCGTGATATTGATGAGCCTTGACAACTGTCCACCA GACATTGACAGGTGATGAAA
Downstream 100 bases:
>100_bases ACCTCTTTTTCCCATTAATTTCTTGCCATTTTTTCGAAATGATTTTAAGAAGTTCGTGAGTTATTAATTTGGTGGAATTC TATGGCAATAGACGTCAGAA
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MEVDFKVAPEEKVRKKPSFIKPWMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWI EVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDKFREINEKFPDYRFPVEK IEFNKETKEVTYYLRDGEVMKFKILGYGIRPPKPPTKPAQKAAAKAAEKNDTKPVEKPTEKKEAGKIEEKKE
Sequences:
>Translated_232_residues MEVDFKVAPEEKVRKKPSFIKPWMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWI EVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDKFREINEKFPDYRFPVEK IEFNKETKEVTYYLRDGEVMKFKILGYGIRPPKPPTKPAQKAAAKAAEKNDTKPVEKPTEKKEAGKIEEKKE >Mature_232_residues MEVDFKVAPEEKVRKKPSFIKPWMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKCVGCNFCGQICPARAIEMTWI EVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENYILTTEWKDEELELFDWVPIHPDKFREINEKFPDYRFPVEK IEFNKETKEVTYYLRDGEVMKFKILGYGIRPPKPPTKPAQKAAAKAAEKNDTKPVEKPTEKKEAGKIEEKKE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=138, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17864306, Length=111, Percent_Identity=32.4324324324324, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 27234; Mature: 27234
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVDFKVAPEEKVRKKPSFIKPWMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKC CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCCHHHH VGCNFCGQICPARAIEMTWIEVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENY CCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHC ILTTEWKDEELELFDWVPIHPDKFREINEKFPDYRFPVEKIEFNKETKEVTYYLRDGEVM EEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEECCCEE KFKILGYGIRPPKPPTKPAQKAAAKAAEKNDTKPVEKPTEKKEAGKIEEKKE EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MEVDFKVAPEEKVRKKPSFIKPWMGLKYLFKKPVTIKIPYERVQIAKDYRGFHTLDWKKC CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCCHHHH VGCNFCGQICPARAIEMTWIEVDGKMEKRPHPKIDYGRCTFCEFCVDVCPPGALGFIENY CCCCCHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHC ILTTEWKDEELELFDWVPIHPDKFREINEKFPDYRFPVEKIEFNKETKEVTYYLRDGEVM EEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEECCCEE KFKILGYGIRPPKPPTKPAQKAAAKAAEKNDTKPVEKPTEKKEAGKIEEKKE EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA