Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223632

Identifier: 212223632

GI number: 212223632

Start: 446209

End: 446793

Strand: Reverse

Name: 212223632

Synonym: TON_0485

Alternate gene names: NA

Gene position: 446793-446209 (Counterclockwise)

Preceding gene: 212223633

Following gene: 212223629

Centisome position: 24.18

GC content: 48.38

Gene sequence:

>585_bases
ATGGCAATAGACGTCAGAAATGAAAAGAACTTCGGTCTCTGGGGATCAATCTTAGCGCTCGTCGCGGCGTTTATGGGAGC
AATACCCTACATCGGCGTCTTTGGAAGCACGCTATCACTGATTGCATTCATACTGGTCTTGCTCGCCCTGAAGGGAATCG
GAGATAAGGTTGGTGATGAGAGGCCTTTCAAGTATTACCTCTACAGCGTCATTGTGGCCATTGCAGGAGTAGTATTCGCA
ATAGTTCTCATCTTGATTGGAGCAATAACACTGCCGAAAGGCGGCATGAATGAGCCCTATGAGACATTCGGTATAGGGAT
GGTTCTGCTCGGCATCATACTCATAATCGCCGTGTTTATACTGGCAGTATACTTCCAGAAGCAGGCGTGGGAGGTCATGT
ACGAAATAACCGGGGTAGAAGAGTTCCAGAAGACCGCCAAATGGCTCTGGTGGGGTGCGTTAACACTCATAATACTCATA
GGCAGCATCCTGCTGCTAATTGCCGCAATCTACCAGATAATAGCGTTCTCCAACATGCCTGAGGAGCTTGAGTTCAGAGG
AACGTACAGGAGTCCCATCTACTAA

Upstream 100 bases:

>100_bases
AGAAGAAAAGAAAGAATGAACCTCTTTTTCCCATTAATTTCTTGCCATTTTTTCGAAATGATTTTAAGAAGTTCGTGAGT
TATTAATTTGGTGGAATTCT

Downstream 100 bases:

>100_bases
TTCCTTTTTCTTTTCTCAAAAATTGAAAGATCAAAGGAGCCTGTCAAGGATTATTGCCGTCAATGCTCCAACCGCCATGC
CTGACTCAAGTATGCTGGAA

Product: membrane protein, conserved

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFA
IVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILI
GSILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY

Sequences:

>Translated_194_residues
MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFA
IVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILI
GSILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY
>Mature_193_residues
AIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFAI
VLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIG
SILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY

Specific function: Unknown

COG id: COG2245

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21451; Mature: 21320

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RPFKYYLYSVIVAIAGVVFAIVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIGSILLLIAAIYQIIAFSNMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EELEFRGTYRSPIY
HHHHHCCCCCCCCC
>Mature Secondary Structure 
AIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RPFKYYLYSVIVAIAGVVFAIVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIGSILLLIAAIYQIIAFSNMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EELEFRGTYRSPIY
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA