| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223632
Identifier: 212223632
GI number: 212223632
Start: 446209
End: 446793
Strand: Reverse
Name: 212223632
Synonym: TON_0485
Alternate gene names: NA
Gene position: 446793-446209 (Counterclockwise)
Preceding gene: 212223633
Following gene: 212223629
Centisome position: 24.18
GC content: 48.38
Gene sequence:
>585_bases ATGGCAATAGACGTCAGAAATGAAAAGAACTTCGGTCTCTGGGGATCAATCTTAGCGCTCGTCGCGGCGTTTATGGGAGC AATACCCTACATCGGCGTCTTTGGAAGCACGCTATCACTGATTGCATTCATACTGGTCTTGCTCGCCCTGAAGGGAATCG GAGATAAGGTTGGTGATGAGAGGCCTTTCAAGTATTACCTCTACAGCGTCATTGTGGCCATTGCAGGAGTAGTATTCGCA ATAGTTCTCATCTTGATTGGAGCAATAACACTGCCGAAAGGCGGCATGAATGAGCCCTATGAGACATTCGGTATAGGGAT GGTTCTGCTCGGCATCATACTCATAATCGCCGTGTTTATACTGGCAGTATACTTCCAGAAGCAGGCGTGGGAGGTCATGT ACGAAATAACCGGGGTAGAAGAGTTCCAGAAGACCGCCAAATGGCTCTGGTGGGGTGCGTTAACACTCATAATACTCATA GGCAGCATCCTGCTGCTAATTGCCGCAATCTACCAGATAATAGCGTTCTCCAACATGCCTGAGGAGCTTGAGTTCAGAGG AACGTACAGGAGTCCCATCTACTAA
Upstream 100 bases:
>100_bases AGAAGAAAAGAAAGAATGAACCTCTTTTTCCCATTAATTTCTTGCCATTTTTTCGAAATGATTTTAAGAAGTTCGTGAGT TATTAATTTGGTGGAATTCT
Downstream 100 bases:
>100_bases TTCCTTTTTCTTTTCTCAAAAATTGAAAGATCAAAGGAGCCTGTCAAGGATTATTGCCGTCAATGCTCCAACCGCCATGC CTGACTCAAGTATGCTGGAA
Product: membrane protein, conserved
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFA IVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILI GSILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY
Sequences:
>Translated_194_residues MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFA IVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILI GSILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY >Mature_193_residues AIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDERPFKYYLYSVIVAIAGVVFAI VLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFILAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIG SILLLIAAIYQIIAFSNMPEELEFRGTYRSPIY
Specific function: Unknown
COG id: COG2245
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21451; Mature: 21320
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPFKYYLYSVIVAIAGVVFAIVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIGSILLLIAAIYQIIAFSNMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EELEFRGTYRSPIY HHHHHCCCCCCCCC >Mature Secondary Structure AIDVRNEKNFGLWGSILALVAAFMGAIPYIGVFGSTLSLIAFILVLLALKGIGDKVGDE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPFKYYLYSVIVAIAGVVFAIVLILIGAITLPKGGMNEPYETFGIGMVLLGIILIIAVFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAVYFQKQAWEVMYEITGVEEFQKTAKWLWWGALTLIILIGSILLLIAAIYQIIAFSNMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EELEFRGTYRSPIY HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA